RNA–Protein interactions for RNA: ENST00000528324.5

CMTM1-209, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-209ENST00000528324 LINC01545Q5VT33 79 aa9.14□□□□□ -0.95
CMTM1-209ENST00000528324 IGLV5-39A0A0G2JS06 123 aa9.13□□□□□ -0.95
CMTM1-209ENST00000528324 TRBV30A0A0K0K1B3 111 aa9.13□□□□□ -0.95
CMTM1-209ENST00000528324 TMEM223A0PJW6 202 aa9.13□□□□□ -0.95
CMTM1-209ENST00000528324 SLPIP03973 132 aa9.13□□□□□ -0.95
CMTM1-209ENST00000528324 PMCHL2Q9BQD1 86 aa9.13□□□□□ -0.95
CMTM1-209ENST00000528324 DNAH5Q8TE73 4624 aa9.12□□□□□ -0.95
CMTM1-209ENST00000528324 Q6ZRU5 148 aa9.12□□□□□ -0.95
CMTM1-209ENST00000528324 TMA7Q9Y2S6 64 aaKnown RBP9.11□□□□□ -0.95
CMTM1-209ENST00000528324 DYNC1H1Q14204 4646 aaKnown RBP9.11□□□□□ -0.95
CMTM1-209ENST00000528324 LOC107984640A0A0U1RRK4 108 aa9.1□□□□□ -0.95
CMTM1-209ENST00000528324 UNQ6190/PRO20217Q6UXQ8 127 aa9.1□□□□□ -0.95
CMTM1-209ENST00000528324 PLEKHB2Q96CS7 222 aa9.1□□□□□ -0.95
CMTM1-209ENST00000528324 LINC00474Q9P2X8 69 aa9.1□□□□□ -0.95
CMTM1-209ENST00000528324 KRTAP10-1P60331 282 aa9.09□□□□□ -0.95
CMTM1-209ENST00000528324 LINC01620Q4KN68 170 aa9.09□□□□□ -0.95
CMTM1-209ENST00000528324 C2orf82Q6UX34 121 aa9.09□□□□□ -0.95
CMTM1-209ENST00000528324 SDIM1Q6ZPB5 146 aa9.09□□□□□ -0.95
CMTM1-209ENST00000528324 LEPROTO15243 131 aa9.07□□□□□ -0.96
CMTM1-209ENST00000528324 C10orf25Q5T742 122 aa9.07□□□□□ -0.96
CMTM1-209ENST00000528324 DPH3Q96FX2 82 aa9.07□□□□□ -0.96
CMTM1-209ENST00000528324 C6orf48Q9UBA6 75 aa9.07□□□□□ -0.96
CMTM1-209ENST00000528324 LRP1BQ9NZR2 4599 aa9.07□□□□□ -0.96
CMTM1-209ENST00000528324 LGALS3P17931 250 aaKnown RBP9.06□□□□□ -0.96
CMTM1-209ENST00000528324 RPL18AQ02543 176 aaKnown RBP9.06□□□□□ -0.96
CMTM1-209ENST00000528324 MYMXA0A1B0GTQ4 84 aa9.05□□□□□ -0.96
CMTM1-209ENST00000528324 LINC00587B1AMM8 73 aa9.05□□□□□ -0.96
CMTM1-209ENST00000528324 NDUFC2-KCTD14E9PQ53 114 aa9.05□□□□□ -0.96
CMTM1-209ENST00000528324 SCGB1D1O95968 90 aa9.05□□□□□ -0.96
CMTM1-209ENST00000528324 TLX1NBP0CAT3 122 aa9.05□□□□□ -0.96
CMTM1-209ENST00000528324 NMUP48645 174 aa9.05□□□□□ -0.96
CMTM1-209ENST00000528324 HERV-K104P63124 156 aa9.05□□□□□ -0.96
CMTM1-209ENST00000528324 HSBP1L1C9JCN9 74 aa9.04□□□□□ -0.96
CMTM1-209ENST00000528324 E9PLD3 99 aa9.04□□□□□ -0.96
CMTM1-209ENST00000528324 J3QQQ9 107 aa9.04□□□□□ -0.96
CMTM1-209ENST00000528324 CDK2AP2O75956 126 aa9.04□□□□□ -0.96
CMTM1-209ENST00000528324 GAGE2BQ13066 116 aa9.04□□□□□ -0.96
CMTM1-209ENST00000528324 Q6ZSA8 131 aa9.04□□□□□ -0.96
CMTM1-209ENST00000528324 NDUFA12Q9UI09 145 aa9.04□□□□□ -0.96
CMTM1-209ENST00000528324 IGKV2-24A0A0C4DH68 120 aa9.03□□□□□ -0.96
CMTM1-209ENST00000528324 PTTG1IPP53801 180 aa9.03□□□□□ -0.96
CMTM1-209ENST00000528324 COX17Q14061 63 aa9.03□□□□□ -0.96
CMTM1-209ENST00000528324 MAJINQ3KP22 176 aa9.02□□□□□ -0.97
CMTM1-209ENST00000528324 STPG4Q8N801 248 aa9.02□□□□□ -0.97
CMTM1-209ENST00000528324 ZNF625Q96I27 306 aaPredicted RBP9.02□□□□□ -0.97
CMTM1-209ENST00000528324 A0A096LNI7 61 aa9.01□□□□□ -0.97
CMTM1-209ENST00000528324 CIRBPQ14011 172 aaKnown RBP9.01□□□□□ -0.97
CMTM1-209ENST00000528324 C9orf116Q5BN46 136 aaPredicted RBP9.01□□□□□ -0.97
CMTM1-209ENST00000528324 SPACA4Q8TDM5 124 aa9.01□□□□□ -0.97
CMTM1-209ENST00000528324 ERG28Q9UKR5 140 aa9.01□□□□□ -0.97
CMTM1-209ENST00000528324 DNAH8Q96JB1 4490 aa9□□□□□ -0.97
CMTM1-209ENST00000528324 GAGE2EQ4V326 116 aa9□□□□□ -0.97
CMTM1-209ENST00000528324 MEIG1Q5JSS6 88 aa9□□□□□ -0.97
CMTM1-209ENST00000528324 Q6ZRP5 223 aa9□□□□□ -0.97
CMTM1-209ENST00000528324 ATOH7Q8N100 152 aa9□□□□□ -0.97
CMTM1-209ENST00000528324 GAGE2DQ9UEU5 116 aa9□□□□□ -0.97
CMTM1-209ENST00000528324 CHTF8P0CG12 524 aa8.99□□□□□ -0.97
CMTM1-209ENST00000528324 PFN2P35080 140 aa8.99□□□□□ -0.97
CMTM1-209ENST00000528324 FAM30AQ9NZY2 134 aa8.99□□□□□ -0.97
CMTM1-209ENST00000528324 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.99□□□□□ -0.97
CMTM1-209ENST00000528324 LINC00158P58513 81 aa8.98□□□□□ -0.97
CMTM1-209ENST00000528324 KRTAP3-3Q9BYR6 98 aa8.98□□□□□ -0.97
CMTM1-209ENST00000528324 KRTAP3-2Q9BYR7 98 aa8.98□□□□□ -0.97
CMTM1-209ENST00000528324 TSPEAR-AS2P59090 65 aa8.97□□□□□ -0.97
CMTM1-209ENST00000528324 SCXQ7RTU7 201 aa8.97□□□□□ -0.97
CMTM1-209ENST00000528324 A0A087WYN8 130 aa8.96□□□□□ -0.98
CMTM1-209ENST00000528324 XGP55808 180 aa8.96□□□□□ -0.98
CMTM1-209ENST00000528324 JOSD1Q15040 202 aaPredicted RBP8.96□□□□□ -0.98
CMTM1-209ENST00000528324 CIRBP-AS1Q8TBR5 109 aa8.96□□□□□ -0.98
CMTM1-209ENST00000528324 APOBP04114 4563 aaKnown RBP8.96□□□□□ -0.98
CMTM1-209ENST00000528324 ZNF815PA8K554 130 aa8.95□□□□□ -0.98
CMTM1-209ENST00000528324 PANO1I0J062 215 aa8.95□□□□□ -0.98
CMTM1-209ENST00000528324 PLAC8Q9NZF1 115 aa8.95□□□□□ -0.98
CMTM1-209ENST00000528324 KIAA1109Q2LD37 5005 aa8.94□□□□□ -0.98
CMTM1-209ENST00000528324 ANKRD39Q53RE8 183 aa8.94□□□□□ -0.98
CMTM1-209ENST00000528324 IGKV2D-26A0A0A0MRZ7 120 aa8.93□□□□□ -0.98
CMTM1-209ENST00000528324 SMIM13P0DJ93 91 aa8.93□□□□□ -0.98
CMTM1-209ENST00000528324 XAGE1AQ9HD64 81 aa8.93□□□□□ -0.98
CMTM1-209ENST00000528324 RYR1P21817 5038 aa8.93□□□□□ -0.98
CMTM1-209ENST00000528324 A0A0J9YXY3 114 aa8.92□□□□□ -0.98
CMTM1-209ENST00000528324 A0A0U1RRA0 63 aa8.92□□□□□ -0.98
CMTM1-209ENST00000528324 SCGB1D4Q6XE38 83 aa8.92□□□□□ -0.98
CMTM1-209ENST00000528324 C7orf33Q8WU49 177 aa8.92□□□□□ -0.98
CMTM1-209ENST00000528324 SND1-IT1Q9HBX3 110 aa8.92□□□□□ -0.98
CMTM1-209ENST00000528324 TIMM17BO60830 172 aa8.91□□□□□ -0.98
CMTM1-209ENST00000528324 HAMPP81172 84 aa8.91□□□□□ -0.98
CMTM1-209ENST00000528324 RPL24P83731 157 aaKnown RBP8.91□□□□□ -0.98
CMTM1-209ENST00000528324 C9orf129Q5T035 196 aaKnown RBP8.91□□□□□ -0.98
CMTM1-209ENST00000528324 MIEN1Q9BRT3 115 aa8.91□□□□□ -0.98
CMTM1-209ENST00000528324 VAMP8Q9BV40 100 aa8.91□□□□□ -0.98
CMTM1-209ENST00000528324 FAM229AH3BQW9 127 aa8.9□□□□□ -0.98
CMTM1-209ENST00000528324 FAM19A5Q7Z5A7 132 aaPredicted RBP8.9□□□□□ -0.98
CMTM1-209ENST00000528324 MIR7-3HGQ8N6C7 128 aa8.9□□□□□ -0.98
CMTM1-209ENST00000528324 PLA2G2DQ9UNK4 145 aa8.9□□□□□ -0.98
CMTM1-209ENST00000528324 A0A1W2PNN7 141 aa8.89□□□□□ -0.99
CMTM1-209ENST00000528324 LBHQ53QV2 105 aaPredicted RBP8.89□□□□□ -0.99
CMTM1-209ENST00000528324 NKAPP1Q8N9T2 125 aa8.89□□□□□ -0.99
CMTM1-209ENST00000528324 COPS9Q8WXC6 57 aa8.89□□□□□ -0.99
CMTM1-209ENST00000528324 EPM2AB3EWF7 344 aa8.88□□□□□ -0.99
CMTM1-209ENST00000528324 TMEM238C9JI98 176 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms