RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 F8VRH5 84 aa9□□□□□ -0.97
CAPN1-212ENST00000527887 DPM2O94777 84 aa9□□□□□ -0.97
CAPN1-212ENST00000527887 XCL1P47992 114 aa9□□□□□ -0.97
CAPN1-212ENST00000527887 CD164L2Q6UWJ8 174 aa9□□□□□ -0.97
CAPN1-212ENST00000527887 ZNF664Q8N3J9 261 aa9□□□□□ -0.97
CAPN1-212ENST00000527887 C7orf33Q8WU49 177 aa9□□□□□ -0.97
CAPN1-212ENST00000527887 VAMP8Q9BV40 100 aa9□□□□□ -0.97
CAPN1-212ENST00000527887 VCX2Q9H322 139 aa9□□□□□ -0.97
CAPN1-212ENST00000527887 CST9LQ9H4G1 147 aa9□□□□□ -0.97
CAPN1-212ENST00000527887 IGLV4-3A0A075B6K6 122 aa8.99□□□□□ -0.97
CAPN1-212ENST00000527887 HSBP1L1C9JCN9 74 aa8.99□□□□□ -0.97
CAPN1-212ENST00000527887 CHTF8P0CG12 524 aa8.99□□□□□ -0.97
CAPN1-212ENST00000527887 AMELXQ99217 191 aa8.99□□□□□ -0.97
CAPN1-212ENST00000527887 IGKCP01834 107 aa8.98□□□□□ -0.97
CAPN1-212ENST00000527887 HNRNPA3P51991 378 aaKnown RBP8.98□□□□□ -0.97
CAPN1-212ENST00000527887 CHTOPQ9Y3Y2 248 aaKnown RBP8.98□□□□□ -0.97
CAPN1-212ENST00000527887 HMCN2Q8NDA2 5059 aa8.97□□□□□ -0.97
CAPN1-212ENST00000527887 H0Y8G0 127 aa8.97□□□□□ -0.97
CAPN1-212ENST00000527887 MAJINQ3KP22 176 aa8.97□□□□□ -0.97
CAPN1-212ENST00000527887 MRPL35Q9NZE8 188 aaKnown RBP8.97□□□□□ -0.97
CAPN1-212ENST00000527887 TSTD3H0UI37 97 aa8.96□□□□□ -0.98
CAPN1-212ENST00000527887 ZNF561-AS1K7EIQ3 104 aa8.96□□□□□ -0.98
CAPN1-212ENST00000527887 FAM104AQ969W3 186 aa8.96□□□□□ -0.98
CAPN1-212ENST00000527887 C2orf88Q9BSF0 95 aa8.96□□□□□ -0.98
CAPN1-212ENST00000527887 IGKV2-24A0A0C4DH68 120 aa8.95□□□□□ -0.98
CAPN1-212ENST00000527887 SEC11AP67812 179 aa8.95□□□□□ -0.98
CAPN1-212ENST00000527887 FAM19A3Q7Z5A8 133 aa8.95□□□□□ -0.98
CAPN1-212ENST00000527887 STPG4Q8N801 248 aa8.95□□□□□ -0.98
CAPN1-212ENST00000527887 CARD19Q96LW7 228 aa8.95□□□□□ -0.98
CAPN1-212ENST00000527887 SYCNQ0VAF6 134 aa8.94□□□□□ -0.98
CAPN1-212ENST00000527887 COX7A2LO14548 114 aa8.93□□□□□ -0.98
CAPN1-212ENST00000527887 IGLC3P0DOY3 106 aa8.93□□□□□ -0.98
CAPN1-212ENST00000527887 MALP21145 153 aa8.93□□□□□ -0.98
CAPN1-212ENST00000527887 SPATA45Q537H7 98 aa8.93□□□□□ -0.98
CAPN1-212ENST00000527887 PMCHL2Q9BQD1 86 aa8.93□□□□□ -0.98
CAPN1-212ENST00000527887 PAM16Q9Y3D7 125 aa8.93□□□□□ -0.98
CAPN1-212ENST00000527887 IGLV4-69A0A075B6H9 119 aa8.92□□□□□ -0.98
CAPN1-212ENST00000527887 A0A096LNI7 61 aa8.92□□□□□ -0.98
CAPN1-212ENST00000527887 TINCRA0A1B0GVN0 87 aa8.92□□□□□ -0.98
CAPN1-212ENST00000527887 ATOH7Q8N100 152 aa8.92□□□□□ -0.98
CAPN1-212ENST00000527887 C11orf86A6NJI1 115 aa8.91□□□□□ -0.98
CAPN1-212ENST00000527887 APOMO95445 188 aa8.91□□□□□ -0.98
CAPN1-212ENST00000527887 UBE2D1P51668 147 aa8.91□□□□□ -0.98
CAPN1-212ENST00000527887 Q6ZUT4 128 aa8.91□□□□□ -0.98
CAPN1-212ENST00000527887 OPRPNQ99935 248 aaPredicted RBP8.91□□□□□ -0.98
CAPN1-212ENST00000527887 PLA2G2DQ9UNK4 145 aa8.91□□□□□ -0.98
CAPN1-212ENST00000527887 LOC107984640A0A0U1RRK4 108 aa8.9□□□□□ -0.98
CAPN1-212ENST00000527887 MT1HL1P0DM35 61 aa8.9□□□□□ -0.98
CAPN1-212ENST00000527887 ZC2HC1BQ5TFG8 222 aa8.9□□□□□ -0.98
CAPN1-212ENST00000527887 LINC00526Q96FQ7 95 aa8.9□□□□□ -0.98
CAPN1-212ENST00000527887 C2orf48Q96LS8 159 aa8.9□□□□□ -0.98
CAPN1-212ENST00000527887 MIEN1Q9BRT3 115 aa8.9□□□□□ -0.98
CAPN1-212ENST00000527887 TRAV13-1A0A0B4J241 112 aa8.89□□□□□ -0.99
CAPN1-212ENST00000527887 DLEU1O43261 78 aa8.89□□□□□ -0.99
CAPN1-212ENST00000527887 HERVK_113P61574 105 aa8.89□□□□□ -0.99
CAPN1-212ENST00000527887 HERVK_113P63121 156 aa8.89□□□□□ -0.99
CAPN1-212ENST00000527887 PRR3P79522 188 aaKnown RBP8.89□□□□□ -0.99
CAPN1-212ENST00000527887 IGLV5-45A0A087WSX0 123 aa8.88□□□□□ -0.99
CAPN1-212ENST00000527887 E9PLD3 99 aa8.88□□□□□ -0.99
CAPN1-212ENST00000527887 F8WDY8 70 aa8.88□□□□□ -0.99
CAPN1-212ENST00000527887 PTTG1IPP53801 180 aa8.88□□□□□ -0.99
CAPN1-212ENST00000527887 CAMK2N2Q96S95 79 aa8.88□□□□□ -0.99
CAPN1-212ENST00000527887 UQCR10Q9UDW1 63 aa8.88□□□□□ -0.99
CAPN1-212ENST00000527887 A0A0J9YXV3 536 aa8.87□□□□□ -0.99
CAPN1-212ENST00000527887 COX8AP10176 69 aa8.87□□□□□ -0.99
CAPN1-212ENST00000527887 RNF151Q2KHN1 245 aa8.87□□□□□ -0.99
CAPN1-212ENST00000527887 Q6ZRP5 223 aa8.87□□□□□ -0.99
CAPN1-212ENST00000527887 ANKRD39Q53RE8 183 aa8.86□□□□□ -0.99
CAPN1-212ENST00000527887 RNASE13Q5GAN3 156 aaKnown RBP8.86□□□□□ -0.99
CAPN1-212ENST00000527887 LINC00242Q5T6M2 205 aa8.86□□□□□ -0.99
CAPN1-212ENST00000527887 SLC25A34Q6PIV7 304 aa8.86□□□□□ -0.99
CAPN1-212ENST00000527887 SPINK6Q6UWN8 80 aa8.86□□□□□ -0.99
CAPN1-212ENST00000527887 C5orf38Q86SI9 138 aa8.86□□□□□ -0.99
CAPN1-212ENST00000527887 GEMIN7Q9H840 131 aaKnown RBP8.86□□□□□ -0.99
CAPN1-212ENST00000527887 TMEM223A0PJW6 202 aa8.85□□□□□ -0.99
CAPN1-212ENST00000527887 H3BRM9 83 aa8.85□□□□□ -0.99
CAPN1-212ENST00000527887 ZNF22P17026 224 aaPredicted RBP8.85□□□□□ -0.99
CAPN1-212ENST00000527887 DDTP30046 118 aa8.85□□□□□ -0.99
CAPN1-212ENST00000527887 TMEM170BQ5T4T1 132 aa8.85□□□□□ -0.99
CAPN1-212ENST00000527887 LINC01600Q96MT4 127 aa8.85□□□□□ -0.99
CAPN1-212ENST00000527887 PRO1933Q9H354 126 aa8.85□□□□□ -0.99
CAPN1-212ENST00000527887 IGHV3OR16-9A0A0B4J2B5 98 aa8.84□□□□□ -0.99
CAPN1-212ENST00000527887 SPAG11BQ08648 103 aa8.84□□□□□ -0.99
CAPN1-212ENST00000527887 GAGE2BQ13066 116 aa8.84□□□□□ -0.99
CAPN1-212ENST00000527887 BOD1L2Q8IYS8 172 aa8.84□□□□□ -0.99
CAPN1-212ENST00000527887 LINC01561Q8N1V8 128 aa8.84□□□□□ -0.99
CAPN1-212ENST00000527887 REG3GQ6UW15 175 aa8.83□□□□□ -1
CAPN1-212ENST00000527887 PLEKHB2Q96CS7 222 aa8.83□□□□□ -1
CAPN1-212ENST00000527887 C14orf144Q96I85 54 aa8.83□□□□□ -1
CAPN1-212ENST00000527887 LEPROTO15243 131 aa8.82□□□□□ -1
CAPN1-212ENST00000527887 SRSF9Q13242 221 aaKnown RBP eCLIP8.82□□□□□ -1
CAPN1-212ENST00000527887 TNXBP22105 4242 aa8.82□□□□□ -1
CAPN1-212ENST00000527887 UBR4Q5T4S7 5183 aa8.82□□□□□ -1
CAPN1-212ENST00000527887 LINC00469Q8N7U9 141 aa8.81□□□□□ -1
CAPN1-212ENST00000527887 CDKN2A-AS1Q9UH64 79 aa8.81□□□□□ -1
CAPN1-212ENST00000527887 IGKV2D-26A0A0A0MRZ7 120 aa8.8□□□□□ -1
CAPN1-212ENST00000527887 IGLV5-39A0A0G2JS06 123 aa8.8□□□□□ -1
CAPN1-212ENST00000527887 A0A1W2PNN7 141 aa8.8□□□□□ -1
CAPN1-212ENST00000527887 PCP4L1A6NKN8 68 aa8.8□□□□□ -1
CAPN1-212ENST00000527887 NDUFA1O15239 70 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms