RNA–Protein interactions for RNA: ENST00000525642.1

PKP3-203, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 495 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-203ENST00000525642 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.9□□□□□ -0.66
PKP3-203ENST00000525642 LINC00528Q8N1L1 170 aa10.9□□□□□ -0.66
PKP3-203ENST00000525642 HIST1H2BHQ93079 126 aa10.9□□□□□ -0.66
PKP3-203ENST00000525642 IFI27L1Q96BM0 104 aa10.9□□□□□ -0.66
PKP3-203ENST00000525642 HIST1H2BNQ99877 126 aa10.9□□□□□ -0.66
PKP3-203ENST00000525642 HIST1H2BMQ99879 126 aa10.9□□□□□ -0.66
PKP3-203ENST00000525642 LINC00474Q9P2X8 69 aa10.9□□□□□ -0.66
PKP3-203ENST00000525642 TRBV30A0A0K0K1B3 111 aa10.89□□□□□ -0.67
PKP3-203ENST00000525642 FAM229AH3BQW9 127 aa10.89□□□□□ -0.67
PKP3-203ENST00000525642 KRTAP10-4P60372 401 aaPredicted RBP10.89□□□□□ -0.67
PKP3-203ENST00000525642 ZNF22P17026 224 aaPredicted RBP10.88□□□□□ -0.67
PKP3-203ENST00000525642 C2orf82Q6UX34 121 aa10.88□□□□□ -0.67
PKP3-203ENST00000525642 PACRGQ96M98 296 aaPredicted RBP10.88□□□□□ -0.67
PKP3-203ENST00000525642 SRRM2Q9UQ35 2752 aaKnown RBP10.88□□□□□ -0.67
PKP3-203ENST00000525642 IGKV2-24A0A0C4DH68 120 aa10.87□□□□□ -0.67
PKP3-203ENST00000525642 IGLV5-39A0A0G2JS06 123 aa10.87□□□□□ -0.67
PKP3-203ENST00000525642 ATP6V1G1O75348 118 aa10.87□□□□□ -0.67
PKP3-203ENST00000525642 NDUFA6P56556 154 aa10.87□□□□□ -0.67
PKP3-203ENST00000525642 MAJINQ3KP22 176 aa10.87□□□□□ -0.67
PKP3-203ENST00000525642 C6orf226Q5I0X4 101 aa10.87□□□□□ -0.67
PKP3-203ENST00000525642 C11orf86A6NJI1 115 aa10.86□□□□□ -0.67
PKP3-203ENST00000525642 H3BRM9 83 aa10.86□□□□□ -0.67
PKP3-203ENST00000525642 LEPROTL1O95214 131 aa10.85□□□□□ -0.67
PKP3-203ENST00000525642 PRSS2P07478 247 aa10.85□□□□□ -0.67
PKP3-203ENST00000525642 CXCL5P42830 114 aa10.85□□□□□ -0.67
PKP3-203ENST00000525642 Q6ZRP5 223 aa10.85□□□□□ -0.67
PKP3-203ENST00000525642 STPG4Q8N801 248 aa10.85□□□□□ -0.67
PKP3-203ENST00000525642 TOMM7Q9P0U1 55 aa10.85□□□□□ -0.67
PKP3-203ENST00000525642 CHTOPQ9Y3Y2 248 aaKnown RBP10.85□□□□□ -0.67
PKP3-203ENST00000525642 SPINK8P0C7L1 97 aa10.84□□□□□ -0.67
PKP3-203ENST00000525642 COA6Q5JTJ3 125 aaKnown RBP10.84□□□□□ -0.67
PKP3-203ENST00000525642 COX7B2Q8TF08 81 aa10.84□□□□□ -0.67
PKP3-203ENST00000525642 F8VRH5 84 aa10.83□□□□□ -0.68
PKP3-203ENST00000525642 PLA2G1BP04054 148 aaKnown RBP10.83□□□□□ -0.68
PKP3-203ENST00000525642 CKS1BP61024 79 aa10.83□□□□□ -0.68
PKP3-203ENST00000525642 GAGE2BQ13066 116 aa10.83□□□□□ -0.68
PKP3-203ENST00000525642 DPH3Q96FX2 82 aa10.83□□□□□ -0.68
PKP3-203ENST00000525642 PKHD1L1Q86WI1 4243 aa10.82□□□□□ -0.68
PKP3-203ENST00000525642 NDUFC2-KCTD14E9PQ53 114 aa10.82□□□□□ -0.68
PKP3-203ENST00000525642 ODF1Q14990 250 aa10.82□□□□□ -0.68
PKP3-203ENST00000525642 RPL18AQ02543 176 aaKnown RBP10.81□□□□□ -0.68
PKP3-203ENST00000525642 C9orf116Q5BN46 136 aaPredicted RBP10.81□□□□□ -0.68
PKP3-203ENST00000525642 HSPB8Q9UJY1 196 aa10.81□□□□□ -0.68
PKP3-203ENST00000525642 A0A1W2PNN7 141 aa10.8□□□□□ -0.68
PKP3-203ENST00000525642 TMEM223A0PJW6 202 aa10.79□□□□□ -0.68
PKP3-203ENST00000525642 FABP4P15090 132 aa10.78□□□□□ -0.68
PKP3-203ENST00000525642 TMEM170BQ5T4T1 132 aa10.78□□□□□ -0.68
PKP3-203ENST00000525642 INAFM2P0DMQ5 153 aa10.77□□□□□ -0.69
PKP3-203ENST00000525642 RPL37AP61513 92 aaKnown RBP10.76□□□□□ -0.69
PKP3-203ENST00000525642 C9orf129Q5T035 196 aaKnown RBP10.76□□□□□ -0.69
PKP3-203ENST00000525642 KRTAP7-1Q8IUC3 87 aa10.76□□□□□ -0.69
PKP3-203ENST00000525642 GAGE2EQ4V326 116 aa10.75□□□□□ -0.69
PKP3-203ENST00000525642 GAGE2DQ9UEU5 116 aa10.75□□□□□ -0.69
PKP3-203ENST00000525642 C7orf33Q8WU49 177 aa10.74□□□□□ -0.69
PKP3-203ENST00000525642 ZNF625Q96I27 306 aaPredicted RBP10.74□□□□□ -0.69
PKP3-203ENST00000525642 SFTA2Q6UW10 78 aa10.73□□□□□ -0.69
PKP3-203ENST00000525642 MAP1LC3CQ9BXW4 147 aa10.73□□□□□ -0.69
PKP3-203ENST00000525642 MYCBP2O75592 4640 aa10.73□□□□□ -0.69
PKP3-203ENST00000525642 FAM168BA1KXE4 195 aa10.72□□□□□ -0.69
PKP3-203ENST00000525642 PLNP26678 52 aa10.72□□□□□ -0.69
PKP3-203ENST00000525642 H0Y8G0 127 aa10.71□□□□□ -0.69
PKP3-203ENST00000525642 SYS1-DBNDD2H3BUS1 97 aa10.7□□□□□ -0.7
PKP3-203ENST00000525642 DPM2O94777 84 aa10.7□□□□□ -0.7
PKP3-203ENST00000525642 HNRNPA3P51991 378 aaKnown RBP10.7□□□□□ -0.7
PKP3-203ENST00000525642 IGKCP01834 107 aa10.69□□□□□ -0.7
PKP3-203ENST00000525642 COX17Q14061 63 aa10.69□□□□□ -0.7
PKP3-203ENST00000525642 PHF5AQ7RTV0 110 aaKnown RBP10.69□□□□□ -0.7
PKP3-203ENST00000525642 FLG2Q5D862 2391 aaPredicted RBP10.69□□□□□ -0.7
PKP3-203ENST00000525642 PRR3P79522 188 aaKnown RBP10.68□□□□□ -0.7
PKP3-203ENST00000525642 LINC01545Q5VT33 79 aa10.68□□□□□ -0.7
PKP3-203ENST00000525642 PMCHL2Q9BQD1 86 aa10.68□□□□□ -0.7
PKP3-203ENST00000525642 XAGE1AQ9HD64 81 aa10.68□□□□□ -0.7
PKP3-203ENST00000525642 PLA2G2DQ9UNK4 145 aa10.68□□□□□ -0.7
PKP3-203ENST00000525642 PET117Q6UWS5 81 aa10.67□□□□□ -0.7
PKP3-203ENST00000525642 ERG28Q9UKR5 140 aa10.67□□□□□ -0.7
PKP3-203ENST00000525642 C3orf79P0CE67 100 aa10.66□□□□□ -0.7
PKP3-203ENST00000525642 SERTAD4-AS1Q5TG53 156 aa10.66□□□□□ -0.7
PKP3-203ENST00000525642 FAM19A5Q7Z5A7 132 aaPredicted RBP10.66□□□□□ -0.7
PKP3-203ENST00000525642 FAT3Q8TDW7 4589 aa10.65□□□□□ -0.7
PKP3-203ENST00000525642 LEPROTO15243 131 aa10.65□□□□□ -0.7
PKP3-203ENST00000525642 KRTAP11-1Q8IUC1 163 aa10.65□□□□□ -0.7
PKP3-203ENST00000525642 IGLV5-37A0A075B6J1 123 aa10.64□□□□□ -0.71
PKP3-203ENST00000525642 M0QXV9 152 aa10.64□□□□□ -0.71
PKP3-203ENST00000525642 TSPEAR-AS2P59090 65 aa10.64□□□□□ -0.71
PKP3-203ENST00000525642 TP73-AS1Q9UF72 201 aa10.64□□□□□ -0.71
PKP3-203ENST00000525642 LRP1Q07954 4544 aaKnown RBP10.63□□□□□ -0.71
PKP3-203ENST00000525642 PFN2P35080 140 aa10.63□□□□□ -0.71
PKP3-203ENST00000525642 HERV-K104P63124 156 aa10.63□□□□□ -0.71
PKP3-203ENST00000525642 PLEKHB2Q96CS7 222 aa10.63□□□□□ -0.71
PKP3-203ENST00000525642 PSORS1C2Q9UIG4 136 aa10.63□□□□□ -0.71
PKP3-203ENST00000525642 C22orf24Q9Y442 160 aa10.63□□□□□ -0.71
PKP3-203ENST00000525642 SRSF9Q13242 221 aaKnown RBP eCLIP10.62□□□□□ -0.71
PKP3-203ENST00000525642 NDUFA12Q9UI09 145 aa10.62□□□□□ -0.71
PKP3-203ENST00000525642 HERVK_113P61574 105 aa10.61□□□□□ -0.71
PKP3-203ENST00000525642 SND1-IT1Q9HBX3 110 aa10.61□□□□□ -0.71
PKP3-203ENST00000525642 KRTAP29-1A8MX34 341 aaPredicted RBP10.6□□□□□ -0.71
PKP3-203ENST00000525642 E9PLD3 99 aa10.6□□□□□ -0.71
PKP3-203ENST00000525642 J3QQQ9 107 aa10.6□□□□□ -0.71
PKP3-203ENST00000525642 HIST3H2BBQ8N257 126 aa10.6□□□□□ -0.71
PKP3-203ENST00000525642 MYMXA0A1B0GTQ4 84 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms