RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 GVQW2A0A096LPI5 108 aaPredicted RBP4.18□□□□□ -1.74
CD44-214ENST00000525211 hDV102S1A0JD36 115 aa4.18□□□□□ -1.74
CD44-214ENST00000525211 SYS1-DBNDD2H3BUS1 97 aa4.18□□□□□ -1.74
CD44-214ENST00000525211 G0S2P27469 103 aa4.18□□□□□ -1.74
CD44-214ENST00000525211 TSPEAR-AS2P59090 65 aa4.18□□□□□ -1.74
CD44-214ENST00000525211 KRTDAPP60985 99 aa4.18□□□□□ -1.74
CD44-214ENST00000525211 SMAGPQ0VAQ4 97 aa4.18□□□□□ -1.74
CD44-214ENST00000525211 C2orf82Q6UX34 121 aa4.18□□□□□ -1.74
CD44-214ENST00000525211 UNQ6190/PRO20217Q6UXQ8 127 aa4.18□□□□□ -1.74
CD44-214ENST00000525211 Q6ZRU5 148 aa4.18□□□□□ -1.74
CD44-214ENST00000525211 LINC00469Q8N7U9 141 aa4.18□□□□□ -1.74
CD44-214ENST00000525211 ORAOV1Q8WV07 137 aa4.18□□□□□ -1.74
CD44-214ENST00000525211 KRTAP4-12Q9BQ66 201 aa4.18□□□□□ -1.74
CD44-214ENST00000525211 FAT1Q14517 4588 aa4.17□□□□□ -1.74
CD44-214ENST00000525211 IGHV1-58A0A0C4DH39 117 aa4.17□□□□□ -1.74
CD44-214ENST00000525211 SPAG11BQ08648 103 aa4.17□□□□□ -1.74
CD44-214ENST00000525211 MAJINQ3KP22 176 aa4.17□□□□□ -1.74
CD44-214ENST00000525211 C9orf116Q5BN46 136 aaPredicted RBP4.17□□□□□ -1.74
CD44-214ENST00000525211 ATOH7Q8N100 152 aa4.17□□□□□ -1.74
CD44-214ENST00000525211 GEMIN7Q9H840 131 aaKnown RBP4.17□□□□□ -1.74
CD44-214ENST00000525211 HSPB8Q9UJY1 196 aa4.17□□□□□ -1.74
CD44-214ENST00000525211 COX11Q9Y6N1 276 aa4.17□□□□□ -1.74
CD44-214ENST00000525211 IGLV5-52A0A0A0MRZ9 124 aa4.16□□□□□ -1.74
CD44-214ENST00000525211 IGLV5-39A0A0G2JS06 123 aa4.16□□□□□ -1.74
CD44-214ENST00000525211 TMEM223A0PJW6 202 aa4.16□□□□□ -1.74
CD44-214ENST00000525211 LINC01549A6NIU2 74 aa4.16□□□□□ -1.74
CD44-214ENST00000525211 F8VRH5 84 aa4.16□□□□□ -1.74
CD44-214ENST00000525211 CHTF8P0CG12 524 aa4.16□□□□□ -1.74
CD44-214ENST00000525211 HERVK_113P63121 156 aa4.16□□□□□ -1.74
CD44-214ENST00000525211 PAPPA-AS1Q5QFB9 102 aa4.16□□□□□ -1.74
CD44-214ENST00000525211 TMEM170BQ5T4T1 132 aa4.16□□□□□ -1.74
CD44-214ENST00000525211 LINC01545Q5VT33 79 aa4.16□□□□□ -1.74
CD44-214ENST00000525211 TOMM7Q9P0U1 55 aa4.16□□□□□ -1.74
CD44-214ENST00000525211 C6orf48Q9UBA6 75 aa4.16□□□□□ -1.74
CD44-214ENST00000525211 UBR4Q5T4S7 5183 aa4.16□□□□□ -1.74
CD44-214ENST00000525211 IGKV2D-26A0A0A0MRZ7 120 aa4.15□□□□□ -1.75
CD44-214ENST00000525211 C16orf90A8MZG2 172 aa4.15□□□□□ -1.75
CD44-214ENST00000525211 S100A6P06703 90 aa4.15□□□□□ -1.75
CD44-214ENST00000525211 SDIM1Q6ZPB5 146 aa4.15□□□□□ -1.75
CD44-214ENST00000525211 LINC01561Q8N1V8 128 aa4.15□□□□□ -1.75
CD44-214ENST00000525211 STPG4Q8N801 248 aa4.15□□□□□ -1.75
CD44-214ENST00000525211 OR10D4PQ8NGN7 298 aa4.15□□□□□ -1.75
CD44-214ENST00000525211 PACRGQ96M98 296 aaPredicted RBP4.15□□□□□ -1.75
CD44-214ENST00000525211 MAP1LC3CQ9BXW4 147 aa4.15□□□□□ -1.75
CD44-214ENST00000525211 TTTY13Q9BZ97 58 aa4.15□□□□□ -1.75
CD44-214ENST00000525211 DPM2O94777 84 aa4.14□□□□□ -1.75
CD44-214ENST00000525211 IGKCP01834 107 aa4.14□□□□□ -1.75
CD44-214ENST00000525211 XGP55808 180 aa4.14□□□□□ -1.75
CD44-214ENST00000525211 CNBPP62633 177 aaKnown RBP4.14□□□□□ -1.75
CD44-214ENST00000525211 SYCNQ0VAF6 134 aa4.14□□□□□ -1.75
CD44-214ENST00000525211 CFAP161Q6P656 301 aa4.14□□□□□ -1.75
CD44-214ENST00000525211 PET117Q6UWS5 81 aa4.14□□□□□ -1.75
CD44-214ENST00000525211 KRTAP7-1Q8IUC3 87 aa4.14□□□□□ -1.75
CD44-214ENST00000525211 C9orf163Q8N9P6 203 aa4.14□□□□□ -1.75
CD44-214ENST00000525211 COX7B2Q8TF08 81 aa4.14□□□□□ -1.75
CD44-214ENST00000525211 TP73-AS1Q9UF72 201 aa4.14□□□□□ -1.75
CD44-214ENST00000525211 A0A096LNI7 61 aa4.13□□□□□ -1.75
CD44-214ENST00000525211 SEC11AP67812 179 aa4.13□□□□□ -1.75
CD44-214ENST00000525211 ZNF625Q96I27 306 aaPredicted RBP4.13□□□□□ -1.75
CD44-214ENST00000525211 C2orf48Q96LS8 159 aa4.13□□□□□ -1.75
CD44-214ENST00000525211 CARD19Q96LW7 228 aa4.13□□□□□ -1.75
CD44-214ENST00000525211 CAMK2N2Q96S95 79 aa4.13□□□□□ -1.75
CD44-214ENST00000525211 APOMO95445 188 aa4.12□□□□□ -1.75
CD44-214ENST00000525211 S100A2P29034 98 aa4.12□□□□□ -1.75
CD44-214ENST00000525211 C14orf177Q52M58 125 aa4.12□□□□□ -1.75
CD44-214ENST00000525211 Q6ZRP5 223 aa4.12□□□□□ -1.75
CD44-214ENST00000525211 Q6ZSA8 131 aa4.12□□□□□ -1.75
CD44-214ENST00000525211 Q8IZM0 81 aa4.12□□□□□ -1.75
CD44-214ENST00000525211 Q8NDZ9 215 aa4.12□□□□□ -1.75
CD44-214ENST00000525211 KRTAP9-2Q9BYQ4 174 aa4.12□□□□□ -1.75
CD44-214ENST00000525211 A0A1W2PNN7 141 aa4.11□□□□□ -1.75
CD44-214ENST00000525211 FAM168BA1KXE4 195 aa4.11□□□□□ -1.75
CD44-214ENST00000525211 H3BRM9 83 aa4.11□□□□□ -1.75
CD44-214ENST00000525211 LEPROTO15243 131 aa4.11□□□□□ -1.75
CD44-214ENST00000525211 PLNP26678 52 aa4.11□□□□□ -1.75
CD44-214ENST00000525211 C6orf226Q5I0X4 101 aa4.11□□□□□ -1.75
CD44-214ENST00000525211 PYY3Q5JQD4 70 aa4.11□□□□□ -1.75
CD44-214ENST00000525211 IGKV2-24A0A0C4DH68 120 aa4.1□□□□□ -1.75
CD44-214ENST00000525211 A0A0U1RRA0 63 aa4.1□□□□□ -1.75
CD44-214ENST00000525211 KRTAP9-6A0A140TA67 174 aa4.1□□□□□ -1.75
CD44-214ENST00000525211 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.1□□□□□ -1.75
CD44-214ENST00000525211 E9PLD3 99 aa4.1□□□□□ -1.75
CD44-214ENST00000525211 NDUFA1O15239 70 aa4.1□□□□□ -1.75
CD44-214ENST00000525211 PRSS2P07478 247 aa4.1□□□□□ -1.75
CD44-214ENST00000525211 GAGE2BQ13066 116 aa4.1□□□□□ -1.75
CD44-214ENST00000525211 C9orf129Q5T035 196 aaKnown RBP4.1□□□□□ -1.75
CD44-214ENST00000525211 KRTAP11-1Q8IUC1 163 aa4.1□□□□□ -1.75
CD44-214ENST00000525211 CIRBP-AS1Q8TBR5 109 aa4.1□□□□□ -1.75
CD44-214ENST00000525211 PLEKHB2Q96CS7 222 aa4.1□□□□□ -1.75
CD44-214ENST00000525211 KRTAP4-5Q9BYR2 181 aa4.1□□□□□ -1.75
CD44-214ENST00000525211 LOC105371267A0A1B0GV96 52 aa4.09□□□□□ -1.75
CD44-214ENST00000525211 J3QQQ9 107 aa4.09□□□□□ -1.75
CD44-214ENST00000525211 SMR3BP02814 79 aaPredicted RBP4.09□□□□□ -1.75
CD44-214ENST00000525211 CKS1BP61024 79 aa4.09□□□□□ -1.75
CD44-214ENST00000525211 CIRBPQ14011 172 aaKnown RBP4.09□□□□□ -1.75
CD44-214ENST00000525211 GAGE2EQ4V326 116 aa4.09□□□□□ -1.75
CD44-214ENST00000525211 SCXQ7RTU7 201 aa4.09□□□□□ -1.75
CD44-214ENST00000525211 PCP2Q8IVA1 136 aa4.09□□□□□ -1.75
CD44-214ENST00000525211 SPACA4Q8TDM5 124 aa4.09□□□□□ -1.75
CD44-214ENST00000525211 XAGE1AQ9HD64 81 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms