RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 PRSS2P07478 247 aa8.15□□□□□ -1.1
VEGFA-224ENST00000523873 GAGE2BQ13066 116 aa8.15□□□□□ -1.1
VEGFA-224ENST00000523873 CIRBPQ14011 172 aaKnown RBP8.15□□□□□ -1.1
VEGFA-224ENST00000523873 MAJINQ3KP22 176 aa8.15□□□□□ -1.1
VEGFA-224ENST00000523873 Q8IZM0 81 aa8.15□□□□□ -1.1
VEGFA-224ENST00000523873 DPH3Q96FX2 82 aa8.15□□□□□ -1.1
VEGFA-224ENST00000523873 A0A087WYN8 130 aa8.14□□□□□ -1.11
VEGFA-224ENST00000523873 TRAV12-1A0A0B4J245 112 aa8.14□□□□□ -1.11
VEGFA-224ENST00000523873 LOC107984640A0A0U1RRK4 108 aa8.14□□□□□ -1.11
VEGFA-224ENST00000523873 RPL18AQ02543 176 aaKnown RBP8.14□□□□□ -1.11
VEGFA-224ENST00000523873 Q5VSD8 79 aa8.14□□□□□ -1.11
VEGFA-224ENST00000523873 ABCA13Q86UQ4 5058 aa8.14□□□□□ -1.11
VEGFA-224ENST00000523873 EPM2AB3EWF7 344 aa8.13□□□□□ -1.11
VEGFA-224ENST00000523873 F8WDY8 70 aa8.13□□□□□ -1.11
VEGFA-224ENST00000523873 H3BRM9 83 aa8.13□□□□□ -1.11
VEGFA-224ENST00000523873 PTTG1IPP53801 180 aa8.13□□□□□ -1.11
VEGFA-224ENST00000523873 RNF151Q2KHN1 245 aa8.13□□□□□ -1.11
VEGFA-224ENST00000523873 C9orf116Q5BN46 136 aaPredicted RBP8.13□□□□□ -1.11
VEGFA-224ENST00000523873 C6orf226Q5I0X4 101 aa8.13□□□□□ -1.11
VEGFA-224ENST00000523873 TMEM170BQ5T4T1 132 aa8.13□□□□□ -1.11
VEGFA-224ENST00000523873 LINC00528Q8N1L1 170 aa8.13□□□□□ -1.11
VEGFA-224ENST00000523873 COX7B2Q8TF08 81 aa8.13□□□□□ -1.11
VEGFA-224ENST00000523873 F8VRH5 84 aa8.12□□□□□ -1.11
VEGFA-224ENST00000523873 CKS1BP61024 79 aa8.12□□□□□ -1.11
VEGFA-224ENST00000523873 ODF1Q14990 250 aa8.12□□□□□ -1.11
VEGFA-224ENST00000523873 STPG4Q8N801 248 aa8.12□□□□□ -1.11
VEGFA-224ENST00000523873 HSPB8Q9UJY1 196 aa8.12□□□□□ -1.11
VEGFA-224ENST00000523873 FAT1Q14517 4588 aa8.12□□□□□ -1.11
VEGFA-224ENST00000523873 TRBV30A0A0K0K1B3 111 aa8.11□□□□□ -1.11
VEGFA-224ENST00000523873 PMCHL2Q9BQD1 86 aa8.11□□□□□ -1.11
VEGFA-224ENST00000523873 IGLV5-39A0A0G2JS06 123 aa8.1□□□□□ -1.11
VEGFA-224ENST00000523873 GAGE2EQ4V326 116 aa8.1□□□□□ -1.11
VEGFA-224ENST00000523873 Q6ZRP5 223 aa8.1□□□□□ -1.11
VEGFA-224ENST00000523873 PLAC8Q9NZF1 115 aa8.1□□□□□ -1.11
VEGFA-224ENST00000523873 GAGE2DQ9UEU5 116 aa8.1□□□□□ -1.11
VEGFA-224ENST00000523873 PKIGQ9Y2B9 76 aa8.1□□□□□ -1.11
VEGFA-224ENST00000523873 FAM229AH3BQW9 127 aa8.09□□□□□ -1.11
VEGFA-224ENST00000523873 COA6Q5JTJ3 125 aaKnown RBP8.09□□□□□ -1.11
VEGFA-224ENST00000523873 PCLOQ9Y6V0 5065 aa8.09□□□□□ -1.11
VEGFA-224ENST00000523873 A0A1W2PNN7 141 aa8.08□□□□□ -1.12
VEGFA-224ENST00000523873 TMEM223A0PJW6 202 aa8.08□□□□□ -1.12
VEGFA-224ENST00000523873 TLX1NBP0CAT3 122 aa8.08□□□□□ -1.12
VEGFA-224ENST00000523873 CXCL5P42830 114 aa8.08□□□□□ -1.12
VEGFA-224ENST00000523873 MAP1LC3CQ9BXW4 147 aa8.08□□□□□ -1.12
VEGFA-224ENST00000523873 FAM168BA1KXE4 195 aa8.07□□□□□ -1.12
VEGFA-224ENST00000523873 LINC00474Q9P2X8 69 aa8.07□□□□□ -1.12
VEGFA-224ENST00000523873 NDUFC2-KCTD14E9PQ53 114 aa8.06□□□□□ -1.12
VEGFA-224ENST00000523873 VPS13BQ7Z7G8 4022 aa8.06□□□□□ -1.12
VEGFA-224ENST00000523873 SYS1-DBNDD2H3BUS1 97 aa8.05□□□□□ -1.12
VEGFA-224ENST00000523873 C9orf129Q5T035 196 aaKnown RBP8.05□□□□□ -1.12
VEGFA-224ENST00000523873 DPM2O94777 84 aa8.04□□□□□ -1.12
VEGFA-224ENST00000523873 PLA2G1BP04054 148 aaKnown RBP8.04□□□□□ -1.12
VEGFA-224ENST00000523873 KRTAP10-4P60372 401 aaPredicted RBP8.04□□□□□ -1.12
VEGFA-224ENST00000523873 RPL37AP61513 92 aaKnown RBP8.04□□□□□ -1.12
VEGFA-224ENST00000523873 FAM19A5Q7Z5A7 132 aaPredicted RBP8.04□□□□□ -1.12
VEGFA-224ENST00000523873 ZNF625Q96I27 306 aaPredicted RBP8.04□□□□□ -1.12
VEGFA-224ENST00000523873 XAGE1AQ9HD64 81 aa8.04□□□□□ -1.12
VEGFA-224ENST00000523873 IGKCP01834 107 aa8.03□□□□□ -1.12
VEGFA-224ENST00000523873 C3orf79P0CE67 100 aa8.03□□□□□ -1.12
VEGFA-224ENST00000523873 PHF5AQ7RTV0 110 aaKnown RBP8.03□□□□□ -1.12
VEGFA-224ENST00000523873 KRTAP7-1Q8IUC3 87 aa8.03□□□□□ -1.12
VEGFA-224ENST00000523873 INAFM2P0DMQ5 153 aa8.02□□□□□ -1.13
VEGFA-224ENST00000523873 PLNP26678 52 aa8.02□□□□□ -1.13
VEGFA-224ENST00000523873 PFN2P35080 140 aa8.02□□□□□ -1.13
VEGFA-224ENST00000523873 TSPEAR-AS2P59090 65 aa8.02□□□□□ -1.13
VEGFA-224ENST00000523873 KRTDAPP60985 99 aa8.02□□□□□ -1.13
VEGFA-224ENST00000523873 SERTAD4-AS1Q5TG53 156 aa8.01□□□□□ -1.13
VEGFA-224ENST00000523873 ERG28Q9UKR5 140 aa8.01□□□□□ -1.13
VEGFA-224ENST00000523873 LINC01545Q5VT33 79 aa8□□□□□ -1.13
VEGFA-224ENST00000523873 PET117Q6UWS5 81 aa8□□□□□ -1.13
VEGFA-224ENST00000523873 HIST3H2BBQ8N257 126 aa8□□□□□ -1.13
VEGFA-224ENST00000523873 C7orf33Q8WU49 177 aa8□□□□□ -1.13
VEGFA-224ENST00000523873 PKHD1L1Q86WI1 4243 aa8□□□□□ -1.13
VEGFA-224ENST00000523873 A0A0U1RRA0 63 aa7.99□□□□□ -1.13
VEGFA-224ENST00000523873 LEPROTO15243 131 aa7.99□□□□□ -1.13
VEGFA-224ENST00000523873 HNRNPA3P51991 378 aaKnown RBP7.99□□□□□ -1.13
VEGFA-224ENST00000523873 S100A6P06703 90 aa7.98□□□□□ -1.13
VEGFA-224ENST00000523873 HERVK_113P61574 105 aa7.98□□□□□ -1.13
VEGFA-224ENST00000523873 KRTAP11-1Q8IUC1 163 aa7.98□□□□□ -1.13
VEGFA-224ENST00000523873 M0QXV9 152 aa7.97□□□□□ -1.13
VEGFA-224ENST00000523873 PLEKHB2Q96CS7 222 aa7.97□□□□□ -1.13
VEGFA-224ENST00000523873 NDUFA12Q9UI09 145 aa7.97□□□□□ -1.13
VEGFA-224ENST00000523873 J3QQQ9 107 aa7.96□□□□□ -1.14
VEGFA-224ENST00000523873 SMIM13P0DJ93 91 aa7.96□□□□□ -1.14
VEGFA-224ENST00000523873 S100A2P29034 98 aa7.96□□□□□ -1.14
VEGFA-224ENST00000523873 SNRPEP62304 92 aaKnown RBP7.96□□□□□ -1.14
VEGFA-224ENST00000523873 PRR3P79522 188 aaKnown RBP7.96□□□□□ -1.14
VEGFA-224ENST00000523873 MEIG1Q5JSS6 88 aa7.96□□□□□ -1.14
VEGFA-224ENST00000523873 HIST1H2BLQ99880 126 aa7.96□□□□□ -1.14
VEGFA-224ENST00000523873 FLG2Q5D862 2391 aaPredicted RBP7.96□□□□□ -1.14
VEGFA-224ENST00000523873 LINC00158P58513 81 aa7.95□□□□□ -1.14
VEGFA-224ENST00000523873 SFTA2Q6UW10 78 aa7.95□□□□□ -1.14
VEGFA-224ENST00000523873 ATOH7Q8N100 152 aa7.95□□□□□ -1.14
VEGFA-224ENST00000523873 SND1-IT1Q9HBX3 110 aa7.95□□□□□ -1.14
VEGFA-224ENST00000523873 MYMXA0A1B0GTQ4 84 aa7.94□□□□□ -1.14
VEGFA-224ENST00000523873 E9PLD3 99 aa7.94□□□□□ -1.14
VEGFA-224ENST00000523873 LGALS3P17931 250 aaKnown RBP7.94□□□□□ -1.14
VEGFA-224ENST00000523873 COX17Q14061 63 aa7.94□□□□□ -1.14
VEGFA-224ENST00000523873 C22orf24Q9Y442 160 aa7.94□□□□□ -1.14
VEGFA-224ENST00000523873 HERV-K104P63124 156 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms