RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 TEX43Q6ZNM6 134 aa6.6□□□□□ -1.35
SDCBP-211ENST00000523441 LINC01551Q86U37 167 aa6.6□□□□□ -1.35
SDCBP-211ENST00000523441 NKAPP1Q8N9T2 125 aa6.6□□□□□ -1.35
SDCBP-211ENST00000523441 TMEM141Q96I45 108 aa6.6□□□□□ -1.35
SDCBP-211ENST00000523441 C2orf88Q9BSF0 95 aa6.6□□□□□ -1.35
SDCBP-211ENST00000523441 RAB5AP20339 215 aa6.59□□□□□ -1.35
SDCBP-211ENST00000523441 SEC61BP60468 96 aaKnown RBP6.59□□□□□ -1.35
SDCBP-211ENST00000523441 RGS21Q2M5E4 152 aa6.59□□□□□ -1.35
SDCBP-211ENST00000523441 KRTAP13-3Q3SY46 172 aa6.59□□□□□ -1.35
SDCBP-211ENST00000523441 FAM19A1Q7Z5A9 133 aa6.59□□□□□ -1.35
SDCBP-211ENST00000523441 KRTAP13-1Q8IUC0 172 aa6.59□□□□□ -1.35
SDCBP-211ENST00000523441 EIF5A2Q9GZV4 153 aaKnown RBP6.59□□□□□ -1.35
SDCBP-211ENST00000523441 OSTCQ9NRP0 149 aa6.59□□□□□ -1.35
SDCBP-211ENST00000523441 V9GYV3 84 aa6.59□□□□□ -1.35
SDCBP-211ENST00000523441 LOC389332A0A1B0GUA5 103 aa6.58□□□□□ -1.36
SDCBP-211ENST00000523441 TMEM250H0YL14 139 aa6.58□□□□□ -1.36
SDCBP-211ENST00000523441 NAT8BQ9UHF3 227 aa6.58□□□□□ -1.36
SDCBP-211ENST00000523441 TRBV24-1A0A075B6N3 115 aa6.57□□□□□ -1.36
SDCBP-211ENST00000523441 LINC00862A6NCI5 91 aa6.57□□□□□ -1.36
SDCBP-211ENST00000523441 TMEM238C9JI98 176 aa6.57□□□□□ -1.36
SDCBP-211ENST00000523441 F8VRH5 84 aa6.57□□□□□ -1.36
SDCBP-211ENST00000523441 MRPL54Q6P161 138 aaKnown RBP6.57□□□□□ -1.36
SDCBP-211ENST00000523441 Q8IZM0 81 aa6.57□□□□□ -1.36
SDCBP-211ENST00000523441 DAND5Q8N907 189 aa6.57□□□□□ -1.36
SDCBP-211ENST00000523441 FP248Q71RG6 208 aaPredicted RBP6.55□□□□□ -1.36
SDCBP-211ENST00000523441 LINC01561Q8N1V8 128 aa6.55□□□□□ -1.36
SDCBP-211ENST00000523441 HIGD2AQ9BW72 106 aa6.55□□□□□ -1.36
SDCBP-211ENST00000523441 VCX2Q9H322 139 aa6.55□□□□□ -1.36
SDCBP-211ENST00000523441 CDKN2A-AS1Q9UH64 79 aa6.55□□□□□ -1.36
SDCBP-211ENST00000523441 ADIRFQ15847 76 aa6.54□□□□□ -1.36
SDCBP-211ENST00000523441 NDUFA5Q16718 116 aa6.54□□□□□ -1.36
SDCBP-211ENST00000523441 FAM74A3Q4VXF1 159 aa6.54□□□□□ -1.36
SDCBP-211ENST00000523441 CBLN2Q8IUK8 224 aa6.54□□□□□ -1.36
SDCBP-211ENST00000523441 PYGO1Q9Y3Y4 419 aa6.54□□□□□ -1.36
SDCBP-211ENST00000523441 S100A1P23297 94 aa6.53□□□□□ -1.36
SDCBP-211ENST00000523441 SPAG11AQ6PDA7 123 aa6.53□□□□□ -1.36
SDCBP-211ENST00000523441 ALKAL2Q6UX46 152 aa6.53□□□□□ -1.36
SDCBP-211ENST00000523441 GEMIN7Q9H840 131 aaKnown RBP6.53□□□□□ -1.36
SDCBP-211ENST00000523441 C2orf66Q6UXQ4 117 aa6.52□□□□□ -1.37
SDCBP-211ENST00000523441 SLC51BQ86UW2 128 aa6.52□□□□□ -1.37
SDCBP-211ENST00000523441 Q8NBF4 154 aa6.52□□□□□ -1.37
SDCBP-211ENST00000523441 PLEKHB2Q96CS7 222 aa6.52□□□□□ -1.37
SDCBP-211ENST00000523441 PRELID3AQ96N28 172 aa6.52□□□□□ -1.37
SDCBP-211ENST00000523441 TMEM126AQ9H061 195 aa6.52□□□□□ -1.37
SDCBP-211ENST00000523441 F8W036 122 aa6.51□□□□□ -1.37
SDCBP-211ENST00000523441 ATP6V1G1O75348 118 aa6.51□□□□□ -1.37
SDCBP-211ENST00000523441 MT1HP80294 61 aa6.51□□□□□ -1.37
SDCBP-211ENST00000523441 TMEM136Q6ZRR5 245 aa6.51□□□□□ -1.37
SDCBP-211ENST00000523441 ORMDL3Q8N138 153 aa6.51□□□□□ -1.37
SDCBP-211ENST00000523441 CYSLTR1Q9Y271 337 aa6.51□□□□□ -1.37
SDCBP-211ENST00000523441 SRP19P09132 144 aaKnown RBP6.5□□□□□ -1.37
SDCBP-211ENST00000523441 PFN2P35080 140 aa6.5□□□□□ -1.37
SDCBP-211ENST00000523441 RPL23P62829 140 aaKnown RBP6.5□□□□□ -1.37
SDCBP-211ENST00000523441 HERVK_113P63121 156 aa6.5□□□□□ -1.37
SDCBP-211ENST00000523441 BLOC1S1P78537 153 aa6.5□□□□□ -1.37
SDCBP-211ENST00000523441 COX7B2Q8TF08 81 aa6.5□□□□□ -1.37
SDCBP-211ENST00000523441 AMELXQ99217 191 aa6.5□□□□□ -1.37
SDCBP-211ENST00000523441 IGLV5-37A0A075B6J1 123 aa6.49□□□□□ -1.37
SDCBP-211ENST00000523441 A0A1B0GW15 77 aa6.49□□□□□ -1.37
SDCBP-211ENST00000523441 SMIM27A0A1W2PRY6 76 aa6.49□□□□□ -1.37
SDCBP-211ENST00000523441 CXCL5P42830 114 aa6.49□□□□□ -1.37
SDCBP-211ENST00000523441 PPBPP02775 128 aa6.48□□□□□ -1.37
SDCBP-211ENST00000523441 SPINK8P0C7L1 97 aa6.48□□□□□ -1.37
SDCBP-211ENST00000523441 CTAG1AP78358 180 aa6.48□□□□□ -1.37
SDCBP-211ENST00000523441 MAP1LC3AQ9H492 121 aa6.48□□□□□ -1.37
SDCBP-211ENST00000523441 KRTAP9-7A8MTY7 169 aa6.47□□□□□ -1.37
SDCBP-211ENST00000523441 SMIM1B2RUZ4 78 aa6.47□□□□□ -1.37
SDCBP-211ENST00000523441 M0R2T5 61 aa6.47□□□□□ -1.37
SDCBP-211ENST00000523441 M0R378 163 aa6.47□□□□□ -1.37
SDCBP-211ENST00000523441 S100A8P05109 93 aa6.47□□□□□ -1.37
SDCBP-211ENST00000523441 CFC1BP0CG36 223 aa6.47□□□□□ -1.37
SDCBP-211ENST00000523441 RAB14P61106 215 aa6.47□□□□□ -1.37
SDCBP-211ENST00000523441 SPRR4Q96PI1 79 aa6.47□□□□□ -1.37
SDCBP-211ENST00000523441 NDUFA12Q9UI09 145 aa6.47□□□□□ -1.37
SDCBP-211ENST00000523441 A0A1B0GVG6 124 aa6.46□□□□□ -1.38
SDCBP-211ENST00000523441 A0A1B0GXF2 115 aa6.45□□□□□ -1.38
SDCBP-211ENST00000523441 KRTAP10-6P60371 365 aaPredicted RBP6.45□□□□□ -1.38
SDCBP-211ENST00000523441 SEC11AP67812 179 aa6.45□□□□□ -1.38
SDCBP-211ENST00000523441 IGLV8-61A0A075B6I0 122 aa6.44□□□□□ -1.38
SDCBP-211ENST00000523441 IGIPA6NJ69 53 aa6.44□□□□□ -1.38
SDCBP-211ENST00000523441 VPREB1P12018 145 aa6.44□□□□□ -1.38
SDCBP-211ENST00000523441 KRTAP19-2Q3LHN2 52 aa6.44□□□□□ -1.38
SDCBP-211ENST00000523441 PDZD11Q5EBL8 140 aa6.44□□□□□ -1.38
SDCBP-211ENST00000523441 XP32Q5T750 250 aa6.44□□□□□ -1.38
SDCBP-211ENST00000523441 FAM19A3Q7Z5A8 133 aa6.44□□□□□ -1.38
SDCBP-211ENST00000523441 Q8N8P6 123 aa6.44□□□□□ -1.38
SDCBP-211ENST00000523441 NAT8Q9UHE5 227 aa6.44□□□□□ -1.38
SDCBP-211ENST00000523441 IGLV9-49A0A0B4J1Y8 123 aa6.43□□□□□ -1.38
SDCBP-211ENST00000523441 ATP5LO75964 103 aa6.43□□□□□ -1.38
SDCBP-211ENST00000523441 SPINK1P00995 79 aa6.43□□□□□ -1.38
SDCBP-211ENST00000523441 ORMDL2Q53FV1 153 aa6.43□□□□□ -1.38
SDCBP-211ENST00000523441 PCOTHQ58A44 107 aa6.43□□□□□ -1.38
SDCBP-211ENST00000523441 ZNF625Q96I27 306 aaPredicted RBP6.43□□□□□ -1.38
SDCBP-211ENST00000523441 GNB1LQ9BYB4 327 aa6.43□□□□□ -1.38
SDCBP-211ENST00000523441 SND1-IT1Q9HBX3 110 aa6.43□□□□□ -1.38
SDCBP-211ENST00000523441 Q8NDZ9 215 aa6.42□□□□□ -1.38
SDCBP-211ENST00000523441 ZNF706Q9Y5V0 76 aaPredicted RBP6.42□□□□□ -1.38
SDCBP-211ENST00000523441 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.41□□□□□ -1.38
SDCBP-211ENST00000523441 RPL24P83731 157 aaKnown RBP6.41□□□□□ -1.38
SDCBP-211ENST00000523441 MOBPQ13875 183 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms