RNA–Protein interactions for RNA: ENST00000520994.1

MCM4-211, Transcript of minichromosome maintenance complex component 4, humanhuman

TSL 3

Gene MCM4, Length 522 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4-211ENST00000520994 C6orf226Q5I0X4 101 aa13.02□□□□□ -0.33
MCM4-211ENST00000520994 LINC00469Q8N7U9 141 aa13.02□□□□□ -0.33
MCM4-211ENST00000520994 RPL18AQ02543 176 aaKnown RBP13.01□□□□□ -0.33
MCM4-211ENST00000520994 COLCA2A8K830 154 aa13□□□□□ -0.33
MCM4-211ENST00000520994 SMIM1B2RUZ4 78 aa13□□□□□ -0.33
MCM4-211ENST00000520994 TRGC2P03986 189 aa13□□□□□ -0.33
MCM4-211ENST00000520994 CKS1BP61024 79 aa13□□□□□ -0.33
MCM4-211ENST00000520994 NDUFC2-KCTD14E9PQ53 114 aa12.99□□□□□ -0.33
MCM4-211ENST00000520994 C2orf82Q6UX34 121 aa12.99□□□□□ -0.33
MCM4-211ENST00000520994 Q6ZRP5 223 aa12.99□□□□□ -0.33
MCM4-211ENST00000520994 H3BRM9 83 aa12.98□□□□□ -0.33
MCM4-211ENST00000520994 TOMM7Q9P0U1 55 aa12.98□□□□□ -0.33
MCM4-211ENST00000520994 F8VRH5 84 aa12.97□□□□□ -0.33
MCM4-211ENST00000520994 ODF1Q14990 250 aa12.97□□□□□ -0.33
MCM4-211ENST00000520994 PMCHL1Q16048 86 aa12.97□□□□□ -0.33
MCM4-211ENST00000520994 DMBT1Q9UGM3 2413 aaPredicted RBP12.97□□□□□ -0.33
MCM4-211ENST00000520994 A0A1W2PNN7 141 aa12.96□□□□□ -0.33
MCM4-211ENST00000520994 KRTAP29-1A8MX34 341 aaPredicted RBP12.96□□□□□ -0.33
MCM4-211ENST00000520994 C9orf116Q5BN46 136 aaPredicted RBP12.96□□□□□ -0.33
MCM4-211ENST00000520994 FAT3Q8TDW7 4589 aa12.96□□□□□ -0.33
MCM4-211ENST00000520994 TRAV12-1A0A0B4J245 112 aa12.95□□□□□ -0.34
MCM4-211ENST00000520994 HSBP1O75506 76 aa12.95□□□□□ -0.34
MCM4-211ENST00000520994 BAGE3Q86Y29 109 aa12.95□□□□□ -0.34
MCM4-211ENST00000520994 COX7B2Q8TF08 81 aa12.94□□□□□ -0.34
MCM4-211ENST00000520994 IGLV5-39A0A0G2JS06 123 aa12.93□□□□□ -0.34
MCM4-211ENST00000520994 OXTP01178 125 aa12.93□□□□□ -0.34
MCM4-211ENST00000520994 NDUFA6P56556 154 aa12.93□□□□□ -0.34
MCM4-211ENST00000520994 LRP1Q07954 4544 aaKnown RBP12.92□□□□□ -0.34
MCM4-211ENST00000520994 ZNF22P17026 224 aaPredicted RBP12.92□□□□□ -0.34
MCM4-211ENST00000520994 IFI27L1Q96BM0 104 aa12.92□□□□□ -0.34
MCM4-211ENST00000520994 PRR3P79522 188 aaKnown RBP12.91□□□□□ -0.34
MCM4-211ENST00000520994 SPINK8P0C7L1 97 aa12.9□□□□□ -0.34
MCM4-211ENST00000520994 HNRNPA3P51991 378 aaKnown RBP12.9□□□□□ -0.34
MCM4-211ENST00000520994 GAGE2EQ4V326 116 aa12.89□□□□□ -0.35
MCM4-211ENST00000520994 GAGE2DQ9UEU5 116 aa12.89□□□□□ -0.35
MCM4-211ENST00000520994 CHTOPQ9Y3Y2 248 aaKnown RBP12.89□□□□□ -0.35
MCM4-211ENST00000520994 C11orf86A6NJI1 115 aa12.88□□□□□ -0.35
MCM4-211ENST00000520994 LINC00310P59036 64 aa12.88□□□□□ -0.35
MCM4-211ENST00000520994 SFTA2Q6UW10 78 aa12.88□□□□□ -0.35
MCM4-211ENST00000520994 HERC1Q15751 4861 aa12.87□□□□□ -0.35
MCM4-211ENST00000520994 SERF1AO75920 110 aa12.87□□□□□ -0.35
MCM4-211ENST00000520994 C9orf129Q5T035 196 aaKnown RBP12.87□□□□□ -0.35
MCM4-211ENST00000520994 FAM19A2Q8N3H0 131 aa12.86□□□□□ -0.35
MCM4-211ENST00000520994 LEPROTL1O95214 131 aa12.85□□□□□ -0.35
MCM4-211ENST00000520994 PHF5AQ7RTV0 110 aaKnown RBP12.84□□□□□ -0.35
MCM4-211ENST00000520994 KRTAP7-1Q8IUC3 87 aa12.84□□□□□ -0.35
MCM4-211ENST00000520994 FAM168BA1KXE4 195 aa12.83□□□□□ -0.36
MCM4-211ENST00000520994 TMEM170BQ5T4T1 132 aa12.83□□□□□ -0.36
MCM4-211ENST00000520994 J3QL48 77 aa12.82□□□□□ -0.36
MCM4-211ENST00000520994 SRSF9Q13242 221 aaKnown RBP eCLIP12.82□□□□□ -0.36
MCM4-211ENST00000520994 SPINK6Q6UWN8 80 aa12.82□□□□□ -0.36
MCM4-211ENST00000520994 HSPB8Q9UJY1 196 aa12.82□□□□□ -0.36
MCM4-211ENST00000520994 PLA2G2DQ9UNK4 145 aa12.82□□□□□ -0.36
MCM4-211ENST00000520994 COX17Q14061 63 aa12.81□□□□□ -0.36
MCM4-211ENST00000520994 PSORS1C2Q9UIG4 136 aa12.81□□□□□ -0.36
MCM4-211ENST00000520994 TMEM223A0PJW6 202 aa12.8□□□□□ -0.36
MCM4-211ENST00000520994 SCO1O75880 301 aa12.8□□□□□ -0.36
MCM4-211ENST00000520994 FAM19A5Q7Z5A7 132 aaPredicted RBP12.8□□□□□ -0.36
MCM4-211ENST00000520994 TP73-AS1Q9UF72 201 aa12.8□□□□□ -0.36
MCM4-211ENST00000520994 M0QXV9 152 aa12.79□□□□□ -0.36
MCM4-211ENST00000520994 NUPR1O60356 82 aa12.79□□□□□ -0.36
MCM4-211ENST00000520994 HIST1H2BKO60814 126 aa12.78□□□□□ -0.36
MCM4-211ENST00000520994 HIST1H2BJP06899 126 aa12.78□□□□□ -0.36
MCM4-211ENST00000520994 HIST1H2BOP23527 126 aa12.78□□□□□ -0.36
MCM4-211ENST00000520994 HIST1H2BBP33778 126 aa12.78□□□□□ -0.36
MCM4-211ENST00000520994 HIST1H2BDP58876 126 aa12.78□□□□□ -0.36
MCM4-211ENST00000520994 HIST1H2BCP62807 126 aa12.78□□□□□ -0.36
MCM4-211ENST00000520994 HIST2H2BEQ16778 126 aa12.78□□□□□ -0.36
MCM4-211ENST00000520994 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.78□□□□□ -0.36
MCM4-211ENST00000520994 HIST1H2BHQ93079 126 aa12.78□□□□□ -0.36
MCM4-211ENST00000520994 HIST1H2BNQ99877 126 aa12.78□□□□□ -0.36
MCM4-211ENST00000520994 HIST1H2BMQ99879 126 aa12.78□□□□□ -0.36
MCM4-211ENST00000520994 ZNF625Q96I27 306 aaPredicted RBP12.77□□□□□ -0.37
MCM4-211ENST00000520994 XAGE1AQ9HD64 81 aa12.77□□□□□ -0.37
MCM4-211ENST00000520994 LBHQ53QV2 105 aaPredicted RBP12.76□□□□□ -0.37
MCM4-211ENST00000520994 SERTAD4-AS1Q5TG53 156 aa12.75□□□□□ -0.37
MCM4-211ENST00000520994 ERG28Q9UKR5 140 aa12.75□□□□□ -0.37
MCM4-211ENST00000520994 C22orf24Q9Y442 160 aa12.75□□□□□ -0.37
MCM4-211ENST00000520994 IGLV5-37A0A075B6J1 123 aa12.74□□□□□ -0.37
MCM4-211ENST00000520994 PLNP26678 52 aa12.74□□□□□ -0.37
MCM4-211ENST00000520994 C1orf137Q5JT78 98 aa12.73□□□□□ -0.37
MCM4-211ENST00000520994 FABP4P15090 132 aa12.71□□□□□ -0.37
MCM4-211ENST00000520994 S100A1P23297 94 aa12.71□□□□□ -0.37
MCM4-211ENST00000520994 UBE2BP63146 152 aa12.71□□□□□ -0.37
MCM4-211ENST00000520994 COA6Q5JTJ3 125 aaKnown RBP12.71□□□□□ -0.37
MCM4-211ENST00000520994 REG3GQ6UW15 175 aa12.71□□□□□ -0.37
MCM4-211ENST00000520994 KRTAP11-1Q8IUC1 163 aa12.71□□□□□ -0.37
MCM4-211ENST00000520994 MAP1LC3CQ9BXW4 147 aa12.71□□□□□ -0.37
MCM4-211ENST00000520994 IGLV7-43P04211 117 aa12.7□□□□□ -0.38
MCM4-211ENST00000520994 MRPL55Q7Z7F7 128 aaKnown RBP12.7□□□□□ -0.38
MCM4-211ENST00000520994 LINC01600Q96MT4 127 aa12.7□□□□□ -0.38
MCM4-211ENST00000520994 DPM2O94777 84 aa12.69□□□□□ -0.38
MCM4-211ENST00000520994 HERV-K104P63124 156 aa12.69□□□□□ -0.38
MCM4-211ENST00000520994 LINC00587B1AMM8 73 aa12.68□□□□□ -0.38
MCM4-211ENST00000520994 PFN2P35080 140 aa12.68□□□□□ -0.38
MCM4-211ENST00000520994 TNXBP22105 4242 aa12.67□□□□□ -0.38
MCM4-211ENST00000520994 H0Y8G0 127 aa12.67□□□□□ -0.38
MCM4-211ENST00000520994 MT1HL1P0DM35 61 aa12.67□□□□□ -0.38
MCM4-211ENST00000520994 SND1-IT1Q9HBX3 110 aa12.67□□□□□ -0.38
MCM4-211ENST00000520994 IGKCP01834 107 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms