RNA–Protein interactions for RNA: ENST00000520887.1

FAM49B-218, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 2

Gene FAM49B, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-218ENST00000520887 SYCNQ0VAF6 134 aa3.89□□□□□ -1.79
FAM49B-218ENST00000520887 KRTAP5-11Q6L8G4 156 aa3.89□□□□□ -1.79
FAM49B-218ENST00000520887 C2orf48Q96LS8 159 aa3.89□□□□□ -1.79
FAM49B-218ENST00000520887 OPRPNQ99935 248 aaPredicted RBP3.89□□□□□ -1.79
FAM49B-218ENST00000520887 CST9LQ9H4G1 147 aa3.89□□□□□ -1.79
FAM49B-218ENST00000520887 TRAV12-1A0A0B4J245 112 aa3.88□□□□□ -1.79
FAM49B-218ENST00000520887 LOC107984640A0A0U1RRK4 108 aa3.88□□□□□ -1.79
FAM49B-218ENST00000520887 A0A1B0GVY2 172 aa3.88□□□□□ -1.79
FAM49B-218ENST00000520887 F8VRH5 84 aa3.88□□□□□ -1.79
FAM49B-218ENST00000520887 HIST1H2BKO60814 126 aa3.88□□□□□ -1.79
FAM49B-218ENST00000520887 HIST1H2BJP06899 126 aa3.88□□□□□ -1.79
FAM49B-218ENST00000520887 HIST1H2BOP23527 126 aa3.88□□□□□ -1.79
FAM49B-218ENST00000520887 HIST1H2BBP33778 126 aa3.88□□□□□ -1.79
FAM49B-218ENST00000520887 HIST1H2BDP58876 126 aa3.88□□□□□ -1.79
FAM49B-218ENST00000520887 CNBPP62633 177 aaKnown RBP3.88□□□□□ -1.79
FAM49B-218ENST00000520887 HIST1H2BCP62807 126 aa3.88□□□□□ -1.79
FAM49B-218ENST00000520887 RPL18AQ02543 176 aaKnown RBP3.88□□□□□ -1.79
FAM49B-218ENST00000520887 HIST2H2BEQ16778 126 aa3.88□□□□□ -1.79
FAM49B-218ENST00000520887 PDZD11Q5EBL8 140 aa3.88□□□□□ -1.79
FAM49B-218ENST00000520887 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.88□□□□□ -1.79
FAM49B-218ENST00000520887 LINC00242Q5T6M2 205 aa3.88□□□□□ -1.79
FAM49B-218ENST00000520887 Q8IZM0 81 aa3.88□□□□□ -1.79
FAM49B-218ENST00000520887 FAM19A2Q8N3H0 131 aa3.88□□□□□ -1.79
FAM49B-218ENST00000520887 HIST1H2BHQ93079 126 aa3.88□□□□□ -1.79
FAM49B-218ENST00000520887 HIST1H2BNQ99877 126 aa3.88□□□□□ -1.79
FAM49B-218ENST00000520887 HIST1H2BMQ99879 126 aa3.88□□□□□ -1.79
FAM49B-218ENST00000520887 IGHV3OR16-9A0A0B4J2B5 98 aa3.87□□□□□ -1.79
FAM49B-218ENST00000520887 A0A0J9YXV3 536 aa3.87□□□□□ -1.79
FAM49B-218ENST00000520887 TRBV30A0A0K0K1B3 111 aa3.87□□□□□ -1.79
FAM49B-218ENST00000520887 LINC00587B1AMM8 73 aa3.87□□□□□ -1.79
FAM49B-218ENST00000520887 IGLC3P0DOY3 106 aa3.87□□□□□ -1.79
FAM49B-218ENST00000520887 SEC61BP60468 96 aaKnown RBP3.87□□□□□ -1.79
FAM49B-218ENST00000520887 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.87□□□□□ -1.79
FAM49B-218ENST00000520887 LINC00173Q6ZV60 143 aa3.87□□□□□ -1.79
FAM49B-218ENST00000520887 FAM19A3Q7Z5A8 133 aa3.87□□□□□ -1.79
FAM49B-218ENST00000520887 C15orf56Q8N910 161 aa3.87□□□□□ -1.79
FAM49B-218ENST00000520887 C9orf163Q8N9P6 203 aa3.87□□□□□ -1.79
FAM49B-218ENST00000520887 HSBP1L1C9JCN9 74 aa3.86□□□□□ -1.79
FAM49B-218ENST00000520887 DPM2O94777 84 aa3.86□□□□□ -1.79
FAM49B-218ENST00000520887 WFDC2Q14508 124 aa3.86□□□□□ -1.79
FAM49B-218ENST00000520887 KRTAP26-1Q6PEX3 210 aa3.86□□□□□ -1.79
FAM49B-218ENST00000520887 MAPKAPK5-AS1Q8N8E1 139 aa3.86□□□□□ -1.79
FAM49B-218ENST00000520887 COX7B2Q8TF08 81 aa3.86□□□□□ -1.79
FAM49B-218ENST00000520887 MRPL35Q9NZE8 188 aaKnown RBP3.86□□□□□ -1.79
FAM49B-218ENST00000520887 CDKN2A-AS1Q9UH64 79 aa3.86□□□□□ -1.79
FAM49B-218ENST00000520887 DYNC2H1Q8NCM8 4307 aaKnown RBP3.85□□□□□ -1.79
FAM49B-218ENST00000520887 IGLV5-37A0A075B6J1 123 aa3.85□□□□□ -1.79
FAM49B-218ENST00000520887 IGLV5-45A0A087WSX0 123 aa3.85□□□□□ -1.79
FAM49B-218ENST00000520887 A0A096LNJ9 63 aa3.85□□□□□ -1.79
FAM49B-218ENST00000520887 C11orf86A6NJI1 115 aa3.85□□□□□ -1.79
FAM49B-218ENST00000520887 CDK2AP2O75956 126 aa3.85□□□□□ -1.79
FAM49B-218ENST00000520887 IGKCP01834 107 aa3.85□□□□□ -1.79
FAM49B-218ENST00000520887 SPINK8P0C7L1 97 aa3.85□□□□□ -1.79
FAM49B-218ENST00000520887 LGALS3P17931 250 aaKnown RBP3.85□□□□□ -1.79
FAM49B-218ENST00000520887 KRTDAPP60985 99 aa3.85□□□□□ -1.79
FAM49B-218ENST00000520887 ZC2HC1BQ5TFG8 222 aa3.85□□□□□ -1.79
FAM49B-218ENST00000520887 PET117Q6UWS5 81 aa3.85□□□□□ -1.79
FAM49B-218ENST00000520887 C7orf33Q8WU49 177 aa3.85□□□□□ -1.79
FAM49B-218ENST00000520887 PLEKHB2Q96CS7 222 aa3.85□□□□□ -1.79
FAM49B-218ENST00000520887 PLECQ15149 4684 aaKnown RBP3.85□□□□□ -1.79
FAM49B-218ENST00000520887 IGKV2-24A0A0C4DH68 120 aa3.84□□□□□ -1.79
FAM49B-218ENST00000520887 SMIM1B2RUZ4 78 aa3.84□□□□□ -1.79
FAM49B-218ENST00000520887 ZNF22P17026 224 aaPredicted RBP3.84□□□□□ -1.79
FAM49B-218ENST00000520887 HERV-K104P63124 156 aa3.84□□□□□ -1.79
FAM49B-218ENST00000520887 COX6A2Q02221 97 aa3.84□□□□□ -1.79
FAM49B-218ENST00000520887 GAGE2BQ13066 116 aa3.84□□□□□ -1.79
FAM49B-218ENST00000520887 MAJINQ3KP22 176 aa3.84□□□□□ -1.79
FAM49B-218ENST00000520887 MEIG1Q5JSS6 88 aa3.84□□□□□ -1.79
FAM49B-218ENST00000520887 COA6Q5JTJ3 125 aaKnown RBP3.84□□□□□ -1.79
FAM49B-218ENST00000520887 Q6ZRU5 148 aa3.84□□□□□ -1.79
FAM49B-218ENST00000520887 LYSTQ99698 3801 aa3.84□□□□□ -1.8
FAM49B-218ENST00000520887 MYMXA0A1B0GTQ4 84 aa3.83□□□□□ -1.8
FAM49B-218ENST00000520887 SYS1-DBNDD2H3BUS1 97 aa3.83□□□□□ -1.8
FAM49B-218ENST00000520887 NMUP48645 174 aa3.83□□□□□ -1.8
FAM49B-218ENST00000520887 S100A12P80511 92 aa3.83□□□□□ -1.8
FAM49B-218ENST00000520887 CIRBPQ14011 172 aaKnown RBP3.83□□□□□ -1.8
FAM49B-218ENST00000520887 LINC00526Q96FQ7 95 aa3.83□□□□□ -1.8
FAM49B-218ENST00000520887 MIEN1Q9BRT3 115 aa3.83□□□□□ -1.8
FAM49B-218ENST00000520887 DNAH6Q9C0G6 4158 aa3.83□□□□□ -1.8
FAM49B-218ENST00000520887 NDUFC2-KCTD14E9PQ53 114 aa3.82□□□□□ -1.8
FAM49B-218ENST00000520887 MT3P25713 68 aa3.82□□□□□ -1.8
FAM49B-218ENST00000520887 FUSP35637 526 aaKnown RBP eCLIP3.82□□□□□ -1.8
FAM49B-218ENST00000520887 KRTAP10-1P60331 282 aa3.82□□□□□ -1.8
FAM49B-218ENST00000520887 SNRPEP62304 92 aaKnown RBP3.82□□□□□ -1.8
FAM49B-218ENST00000520887 GAGE2EQ4V326 116 aa3.82□□□□□ -1.8
FAM49B-218ENST00000520887 LCE1EQ5T753 118 aa3.82□□□□□ -1.8
FAM49B-218ENST00000520887 COPS9Q8WXC6 57 aa3.82□□□□□ -1.8
FAM49B-218ENST00000520887 GAGE2DQ9UEU5 116 aa3.82□□□□□ -1.8
FAM49B-218ENST00000520887 KMT2AQ03164 3969 aa3.81□□□□□ -1.8
FAM49B-218ENST00000520887 TMEM223A0PJW6 202 aa3.81□□□□□ -1.8
FAM49B-218ENST00000520887 LEPROTO15243 131 aa3.81□□□□□ -1.8
FAM49B-218ENST00000520887 TLX1NBP0CAT3 122 aa3.81□□□□□ -1.8
FAM49B-218ENST00000520887 LINC00158P58513 81 aa3.81□□□□□ -1.8
FAM49B-218ENST00000520887 COX17Q14061 63 aa3.81□□□□□ -1.8
FAM49B-218ENST00000520887 LINC01620Q4KN68 170 aa3.81□□□□□ -1.8
FAM49B-218ENST00000520887 C2orf82Q6UX34 121 aa3.81□□□□□ -1.8
FAM49B-218ENST00000520887 UNQ6190/PRO20217Q6UXQ8 127 aa3.81□□□□□ -1.8
FAM49B-218ENST00000520887 STPG4Q8N801 248 aa3.81□□□□□ -1.8
FAM49B-218ENST00000520887 NKAPP1Q8N9T2 125 aa3.81□□□□□ -1.8
FAM49B-218ENST00000520887 FAM104AQ969W3 186 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms