RNA–Protein interactions for RNA: ENST00000520126.1

CLK4-204, Transcript of CDC like kinase 4, humanhuman

TSL 2

Gene CLK4, Length 1,316 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-204ENST00000520126 H3BRM9 83 aa10.97□□□□□ -0.65
CLK4-204ENST00000520126 NUPR1O60356 82 aa10.97□□□□□ -0.65
CLK4-204ENST00000520126 KIAA0087Q14695 138 aa10.97□□□□□ -0.65
CLK4-204ENST00000520126 CHTOPQ9Y3Y2 248 aaKnown RBP10.97□□□□□ -0.65
CLK4-204ENST00000520126 A0A087WYN8 130 aa10.96□□□□□ -0.65
CLK4-204ENST00000520126 F8WDY8 70 aa10.96□□□□□ -0.65
CLK4-204ENST00000520126 LEPROTL1O95214 131 aa10.96□□□□□ -0.65
CLK4-204ENST00000520126 STPG4Q8N801 248 aa10.96□□□□□ -0.65
CLK4-204ENST00000520126 SPACA4Q8TDM5 124 aa10.96□□□□□ -0.65
CLK4-204ENST00000520126 MRPL35Q9NZE8 188 aaKnown RBP10.96□□□□□ -0.65
CLK4-204ENST00000520126 HIST1H2BKO60814 126 aa10.95□□□□□ -0.66
CLK4-204ENST00000520126 HIST1H2BJP06899 126 aa10.95□□□□□ -0.66
CLK4-204ENST00000520126 IGLC3P0DOY3 106 aa10.95□□□□□ -0.66
CLK4-204ENST00000520126 HIST1H2BOP23527 126 aa10.95□□□□□ -0.66
CLK4-204ENST00000520126 HIST1H2BBP33778 126 aa10.95□□□□□ -0.66
CLK4-204ENST00000520126 HIST1H2BDP58876 126 aa10.95□□□□□ -0.66
CLK4-204ENST00000520126 LINC00310P59036 64 aa10.95□□□□□ -0.66
CLK4-204ENST00000520126 HIST1H2BCP62807 126 aa10.95□□□□□ -0.66
CLK4-204ENST00000520126 HIST2H2BEQ16778 126 aa10.95□□□□□ -0.66
CLK4-204ENST00000520126 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.95□□□□□ -0.66
CLK4-204ENST00000520126 TMEM170BQ5T4T1 132 aa10.95□□□□□ -0.66
CLK4-204ENST00000520126 HIST1H2BHQ93079 126 aa10.95□□□□□ -0.66
CLK4-204ENST00000520126 HIST1H2BNQ99877 126 aa10.95□□□□□ -0.66
CLK4-204ENST00000520126 HIST1H2BMQ99879 126 aa10.95□□□□□ -0.66
CLK4-204ENST00000520126 SMIM1B2RUZ4 78 aa10.94□□□□□ -0.66
CLK4-204ENST00000520126 Q8IZM0 81 aa10.94□□□□□ -0.66
CLK4-204ENST00000520126 COX7B2Q8TF08 81 aa10.94□□□□□ -0.66
CLK4-204ENST00000520126 LINC00474Q9P2X8 69 aa10.94□□□□□ -0.66
CLK4-204ENST00000520126 C6orf48Q9UBA6 75 aa10.94□□□□□ -0.66
CLK4-204ENST00000520126 IGLV5-45A0A087WSX0 123 aa10.93□□□□□ -0.66
CLK4-204ENST00000520126 RNF151Q2KHN1 245 aa10.93□□□□□ -0.66
CLK4-204ENST00000520126 GAGE2EQ4V326 116 aa10.93□□□□□ -0.66
CLK4-204ENST00000520126 GAGE2DQ9UEU5 116 aa10.93□□□□□ -0.66
CLK4-204ENST00000520126 C11orf86A6NJI1 115 aa10.92□□□□□ -0.66
CLK4-204ENST00000520126 ZNF22P17026 224 aaPredicted RBP10.92□□□□□ -0.66
CLK4-204ENST00000520126 PTTG1IPP53801 180 aa10.92□□□□□ -0.66
CLK4-204ENST00000520126 CIRBPQ14011 172 aaKnown RBP10.92□□□□□ -0.66
CLK4-204ENST00000520126 C9orf116Q5BN46 136 aaPredicted RBP10.92□□□□□ -0.66
CLK4-204ENST00000520126 HSPB8Q9UJY1 196 aa10.92□□□□□ -0.66
CLK4-204ENST00000520126 LOC100996750A0A140TA64 210 aa10.91□□□□□ -0.66
CLK4-204ENST00000520126 KRTAP4-6Q9BYQ5 205 aa10.91□□□□□ -0.66
CLK4-204ENST00000520126 TRAV12-1A0A0B4J245 112 aa10.9□□□□□ -0.66
CLK4-204ENST00000520126 TRBV30A0A0K0K1B3 111 aa10.9□□□□□ -0.66
CLK4-204ENST00000520126 A6NJY4 79 aa10.9□□□□□ -0.66
CLK4-204ENST00000520126 PLA2G1BP04054 148 aaKnown RBP10.9□□□□□ -0.66
CLK4-204ENST00000520126 F8VRH5 84 aa10.88□□□□□ -0.67
CLK4-204ENST00000520126 CXCL5P42830 114 aa10.88□□□□□ -0.67
CLK4-204ENST00000520126 Q6ZRP5 223 aa10.88□□□□□ -0.67
CLK4-204ENST00000520126 PLAC8Q9NZF1 115 aa10.88□□□□□ -0.67
CLK4-204ENST00000520126 RPL37AP61513 92 aaKnown RBP10.87□□□□□ -0.67
CLK4-204ENST00000520126 INAFM2P0DMQ5 153 aa10.86□□□□□ -0.67
CLK4-204ENST00000520126 C7orf33Q8WU49 177 aa10.86□□□□□ -0.67
CLK4-204ENST00000520126 MAP1LC3CQ9BXW4 147 aa10.86□□□□□ -0.67
CLK4-204ENST00000520126 NDUFC2-KCTD14E9PQ53 114 aa10.85□□□□□ -0.67
CLK4-204ENST00000520126 PMCHL2Q9BQD1 86 aa10.85□□□□□ -0.67
CLK4-204ENST00000520126 A0A1W2PNN7 141 aa10.84□□□□□ -0.67
CLK4-204ENST00000520126 TLX1NBP0CAT3 122 aa10.84□□□□□ -0.67
CLK4-204ENST00000520126 ODF1Q14990 250 aa10.84□□□□□ -0.67
CLK4-204ENST00000520126 FAT1Q14517 4588 aa10.84□□□□□ -0.67
CLK4-204ENST00000520126 FAM19A5Q7Z5A7 132 aaPredicted RBP10.84□□□□□ -0.67
CLK4-204ENST00000520126 IGLV5-39A0A0G2JS06 123 aa10.83□□□□□ -0.68
CLK4-204ENST00000520126 ZNF625Q96I27 306 aaPredicted RBP10.83□□□□□ -0.68
CLK4-204ENST00000520126 TMEM223A0PJW6 202 aa10.82□□□□□ -0.68
CLK4-204ENST00000520126 FAM168BA1KXE4 195 aa10.82□□□□□ -0.68
CLK4-204ENST00000520126 XAGE1AQ9HD64 81 aa10.82□□□□□ -0.68
CLK4-204ENST00000520126 DPM2O94777 84 aa10.81□□□□□ -0.68
CLK4-204ENST00000520126 PFN2P35080 140 aa10.81□□□□□ -0.68
CLK4-204ENST00000520126 PLNP26678 52 aa10.8□□□□□ -0.68
CLK4-204ENST00000520126 IGKCP01834 107 aa10.79□□□□□ -0.68
CLK4-204ENST00000520126 PHF5AQ7RTV0 110 aaKnown RBP10.79□□□□□ -0.68
CLK4-204ENST00000520126 C9orf129Q5T035 196 aaKnown RBP10.78□□□□□ -0.68
CLK4-204ENST00000520126 ABCA13Q86UQ4 5058 aa10.77□□□□□ -0.68
CLK4-204ENST00000520126 SYS1-DBNDD2H3BUS1 97 aa10.77□□□□□ -0.69
CLK4-204ENST00000520126 KRTDAPP60985 99 aa10.77□□□□□ -0.69
CLK4-204ENST00000520126 HERVK_113P61574 105 aa10.77□□□□□ -0.69
CLK4-204ENST00000520126 COA6Q5JTJ3 125 aaKnown RBP10.76□□□□□ -0.69
CLK4-204ENST00000520126 ERG28Q9UKR5 140 aa10.76□□□□□ -0.69
CLK4-204ENST00000520126 A0A0U1RRA0 63 aa10.75□□□□□ -0.69
CLK4-204ENST00000520126 M0QXV9 152 aa10.74□□□□□ -0.69
CLK4-204ENST00000520126 S100A6P06703 90 aa10.74□□□□□ -0.69
CLK4-204ENST00000520126 LINC00158P58513 81 aa10.74□□□□□ -0.69
CLK4-204ENST00000520126 UBE2BP63146 152 aa10.74□□□□□ -0.69
CLK4-204ENST00000520126 C3orf79P0CE67 100 aa10.73□□□□□ -0.69
CLK4-204ENST00000520126 MEIG1Q5JSS6 88 aa10.73□□□□□ -0.69
CLK4-204ENST00000520126 SFTA2Q6UW10 78 aa10.73□□□□□ -0.69
CLK4-204ENST00000520126 SRRM2Q9UQ35 2752 aaKnown RBP10.73□□□□□ -0.69
CLK4-204ENST00000520126 VPS13BQ7Z7G8 4022 aa10.72□□□□□ -0.69
CLK4-204ENST00000520126 LEPROTO15243 131 aa10.72□□□□□ -0.69
CLK4-204ENST00000520126 S100A2P29034 98 aa10.72□□□□□ -0.69
CLK4-204ENST00000520126 KRTAP10-4P60372 401 aaPredicted RBP10.72□□□□□ -0.69
CLK4-204ENST00000520126 SERTAD4-AS1Q5TG53 156 aa10.72□□□□□ -0.69
CLK4-204ENST00000520126 PET117Q6UWS5 81 aa10.72□□□□□ -0.69
CLK4-204ENST00000520126 PLEKHB2Q96CS7 222 aa10.72□□□□□ -0.69
CLK4-204ENST00000520126 NDUFA12Q9UI09 145 aa10.72□□□□□ -0.69
CLK4-204ENST00000520126 PCLOQ9Y6V0 5065 aa10.7□□□□□ -0.7
CLK4-204ENST00000520126 MYMXA0A1B0GTQ4 84 aa10.7□□□□□ -0.7
CLK4-204ENST00000520126 LGALS3P17931 250 aaKnown RBP10.7□□□□□ -0.7
CLK4-204ENST00000520126 PRR3P79522 188 aaKnown RBP10.7□□□□□ -0.7
CLK4-204ENST00000520126 J3QQQ9 107 aa10.69□□□□□ -0.7
CLK4-204ENST00000520126 HNRNPA3P51991 378 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms