RNA–Protein interactions for RNA: ENST00000519219.1

TRIM35-202, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 423 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-202ENST00000519219 TOMM6Q96B49 74 aa5.36□□□□□ -1.55
TRIM35-202ENST00000519219 IGHV1-58A0A0C4DH39 117 aa5.35□□□□□ -1.55
TRIM35-202ENST00000519219 PTTG1IPP53801 180 aa5.35□□□□□ -1.55
TRIM35-202ENST00000519219 PYY3Q5JQD4 70 aa5.35□□□□□ -1.55
TRIM35-202ENST00000519219 LINC00518Q8N0U6 118 aa5.35□□□□□ -1.55
TRIM35-202ENST00000519219 HSBP1L1C9JCN9 74 aa5.34□□□□□ -1.55
TRIM35-202ENST00000519219 RPL39P62891 51 aaKnown RBP5.34□□□□□ -1.55
TRIM35-202ENST00000519219 SYCNQ0VAF6 134 aa5.34□□□□□ -1.55
TRIM35-202ENST00000519219 GAGE2BQ13066 116 aa5.34□□□□□ -1.55
TRIM35-202ENST00000519219 PAPPA-AS1Q5QFB9 102 aa5.34□□□□□ -1.55
TRIM35-202ENST00000519219 ERASQ7Z444 233 aa5.34□□□□□ -1.55
TRIM35-202ENST00000519219 TMEM141Q96I45 108 aa5.34□□□□□ -1.55
TRIM35-202ENST00000519219 TIMM17AQ99595 171 aa5.34□□□□□ -1.55
TRIM35-202ENST00000519219 VAMP8Q9BV40 100 aa5.34□□□□□ -1.55
TRIM35-202ENST00000519219 LINC00474Q9P2X8 69 aa5.34□□□□□ -1.55
TRIM35-202ENST00000519219 PSORS1C2Q9UIG4 136 aa5.34□□□□□ -1.55
TRIM35-202ENST00000519219 IGLV4-69A0A075B6H9 119 aa5.33□□□□□ -1.56
TRIM35-202ENST00000519219 H7C423 109 aa5.33□□□□□ -1.56
TRIM35-202ENST00000519219 RNASE13Q5GAN3 156 aaKnown RBP5.33□□□□□ -1.56
TRIM35-202ENST00000519219 PHF5AQ7RTV0 110 aaKnown RBP5.33□□□□□ -1.56
TRIM35-202ENST00000519219 KRTAP11-1Q8IUC1 163 aa5.33□□□□□ -1.56
TRIM35-202ENST00000519219 ATOH7Q8N100 152 aa5.33□□□□□ -1.56
TRIM35-202ENST00000519219 TMEM101Q96IK0 257 aa5.33□□□□□ -1.56
TRIM35-202ENST00000519219 SPANXA1Q9NS26 97 aa5.33□□□□□ -1.56
TRIM35-202ENST00000519219 ZNF25P17030 456 aaPredicted RBP5.32□□□□□ -1.56
TRIM35-202ENST00000519219 C9orf116Q5BN46 136 aaPredicted RBP5.32□□□□□ -1.56
TRIM35-202ENST00000519219 CD164L2Q6UWJ8 174 aa5.32□□□□□ -1.56
TRIM35-202ENST00000519219 PRR26Q8N8Z3 221 aa5.32□□□□□ -1.56
TRIM35-202ENST00000519219 PMCHL2Q9BQD1 86 aa5.32□□□□□ -1.56
TRIM35-202ENST00000519219 C2orf88Q9BSF0 95 aa5.32□□□□□ -1.56
TRIM35-202ENST00000519219 CDC42SE2Q9NRR3 84 aa5.32□□□□□ -1.56
TRIM35-202ENST00000519219 CHTOPQ9Y3Y2 248 aaKnown RBP5.32□□□□□ -1.56
TRIM35-202ENST00000519219 TRAV12-1A0A0B4J245 112 aa5.31□□□□□ -1.56
TRIM35-202ENST00000519219 LOC107984640A0A0U1RRK4 108 aa5.31□□□□□ -1.56
TRIM35-202ENST00000519219 ZNF561-AS1K7EIQ3 104 aa5.31□□□□□ -1.56
TRIM35-202ENST00000519219 DPM2O94777 84 aa5.31□□□□□ -1.56
TRIM35-202ENST00000519219 PLNP26678 52 aa5.31□□□□□ -1.56
TRIM35-202ENST00000519219 PMVKQ15126 192 aa5.31□□□□□ -1.56
TRIM35-202ENST00000519219 LINC01545Q5VT33 79 aa5.31□□□□□ -1.56
TRIM35-202ENST00000519219 TEX43Q6ZNM6 134 aa5.31□□□□□ -1.56
TRIM35-202ENST00000519219 MRPL52Q86TS9 123 aaKnown RBP5.31□□□□□ -1.56
TRIM35-202ENST00000519219 OPRPNQ99935 248 aaPredicted RBP5.31□□□□□ -1.56
TRIM35-202ENST00000519219 VCX2Q9H322 139 aa5.31□□□□□ -1.56
TRIM35-202ENST00000519219 PAM16Q9Y3D7 125 aa5.31□□□□□ -1.56
TRIM35-202ENST00000519219 FAM168BA1KXE4 195 aa5.3□□□□□ -1.56
TRIM35-202ENST00000519219 IGIPA6NJ69 53 aa5.3□□□□□ -1.56
TRIM35-202ENST00000519219 TSTD3H0UI37 97 aa5.3□□□□□ -1.56
TRIM35-202ENST00000519219 IGKCP01834 107 aa5.3□□□□□ -1.56
TRIM35-202ENST00000519219 NPSP0C0P6 89 aa5.3□□□□□ -1.56
TRIM35-202ENST00000519219 SS18Q15532 418 aa5.3□□□□□ -1.56
TRIM35-202ENST00000519219 C1orf137Q5JT78 98 aa5.3□□□□□ -1.56
TRIM35-202ENST00000519219 ZNF664Q8N3J9 261 aa5.3□□□□□ -1.56
TRIM35-202ENST00000519219 UBE2D4Q9Y2X8 147 aa5.3□□□□□ -1.56
TRIM35-202ENST00000519219 PYGO1Q9Y3Y4 419 aa5.3□□□□□ -1.56
TRIM35-202ENST00000519219 IGLV4-3A0A075B6K6 122 aa5.29□□□□□ -1.56
TRIM35-202ENST00000519219 F8VRH5 84 aa5.29□□□□□ -1.56
TRIM35-202ENST00000519219 APOMO95445 188 aa5.29□□□□□ -1.56
TRIM35-202ENST00000519219 RPL18AQ02543 176 aaKnown RBP5.29□□□□□ -1.56
TRIM35-202ENST00000519219 SPATA45Q537H7 98 aa5.29□□□□□ -1.56
TRIM35-202ENST00000519219 Q6ZUT4 128 aa5.29□□□□□ -1.56
TRIM35-202ENST00000519219 C5orf38Q86SI9 138 aa5.29□□□□□ -1.56
TRIM35-202ENST00000519219 CAMK2N2Q96S95 79 aa5.29□□□□□ -1.56
TRIM35-202ENST00000519219 TIMM21Q9BVV7 248 aa5.29□□□□□ -1.56
TRIM35-202ENST00000519219 MRPL35Q9NZE8 188 aaKnown RBP5.29□□□□□ -1.56
TRIM35-202ENST00000519219 TRAV13-1A0A0B4J241 112 aa5.28□□□□□ -1.56
TRIM35-202ENST00000519219 PCP4L1A6NKN8 68 aa5.28□□□□□ -1.56
TRIM35-202ENST00000519219 COX7A2LO14548 114 aa5.28□□□□□ -1.56
TRIM35-202ENST00000519219 MALP21145 153 aa5.28□□□□□ -1.56
TRIM35-202ENST00000519219 HERVK_113P61574 105 aa5.28□□□□□ -1.56
TRIM35-202ENST00000519219 KRTAP7-1Q8IUC3 87 aa5.28□□□□□ -1.56
TRIM35-202ENST00000519219 PRO1933Q9H354 126 aa5.28□□□□□ -1.56
TRIM35-202ENST00000519219 CST9LQ9H4G1 147 aa5.28□□□□□ -1.56
TRIM35-202ENST00000519219 PKIGQ9Y2B9 76 aa5.28□□□□□ -1.56
TRIM35-202ENST00000519219 IGLV7-43P04211 117 aa5.27□□□□□ -1.57
TRIM35-202ENST00000519219 KRTAP1-4P0C5Y4 121 aa5.27□□□□□ -1.57
TRIM35-202ENST00000519219 MRPS36P82909 103 aaKnown RBP5.27□□□□□ -1.57
TRIM35-202ENST00000519219 SPAG11BQ08648 103 aa5.27□□□□□ -1.57
TRIM35-202ENST00000519219 C10orf25Q5T742 122 aa5.27□□□□□ -1.57
TRIM35-202ENST00000519219 ZC2HC1BQ5TFG8 222 aa5.27□□□□□ -1.57
TRIM35-202ENST00000519219 FAM104AQ969W3 186 aa5.27□□□□□ -1.57
TRIM35-202ENST00000519219 GEMIN7Q9H840 131 aaKnown RBP5.27□□□□□ -1.57
TRIM35-202ENST00000519219 MUC2Q02817 5179 aa5.27□□□□□ -1.57
TRIM35-202ENST00000519219 H0Y9J4 135 aa5.26□□□□□ -1.57
TRIM35-202ENST00000519219 NMUP48645 174 aa5.26□□□□□ -1.57
TRIM35-202ENST00000519219 TMEM170BQ5T4T1 132 aa5.26□□□□□ -1.57
TRIM35-202ENST00000519219 C2orf48Q96LS8 159 aa5.26□□□□□ -1.57
TRIM35-202ENST00000519219 CSDC2Q9Y534 153 aaKnown RBP5.26□□□□□ -1.57
TRIM35-202ENST00000519219 A0A087WZ39 114 aa5.25□□□□□ -1.57
TRIM35-202ENST00000519219 SEC11AP67812 179 aa5.25□□□□□ -1.57
TRIM35-202ENST00000519219 FAM19A5Q7Z5A7 132 aaPredicted RBP5.25□□□□□ -1.57
TRIM35-202ENST00000519219 LINC00469Q8N7U9 141 aa5.25□□□□□ -1.57
TRIM35-202ENST00000519219 DIRC1Q969H9 104 aa5.25□□□□□ -1.57
TRIM35-202ENST00000519219 AMELXQ99217 191 aa5.25□□□□□ -1.57
TRIM35-202ENST00000519219 TINCRA0A1B0GVN0 87 aa5.24□□□□□ -1.57
TRIM35-202ENST00000519219 C11orf86A6NJI1 115 aa5.24□□□□□ -1.57
TRIM35-202ENST00000519219 H3BRM9 83 aa5.24□□□□□ -1.57
TRIM35-202ENST00000519219 IGLC3P0DOY3 106 aa5.24□□□□□ -1.57
TRIM35-202ENST00000519219 HERVK_113P63121 156 aa5.24□□□□□ -1.57
TRIM35-202ENST00000519219 UNQ6190/PRO20217Q6UXQ8 127 aa5.24□□□□□ -1.57
TRIM35-202ENST00000519219 ORAOV1Q8WV07 137 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms