RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 KRTAP10-5P60370 271 aa1.73□□□□□ -2.13
RNU4-60P-201ENST00000517239 LCE1EQ5T753 118 aa1.73□□□□□ -2.13
RNU4-60P-201ENST00000517239 C10orf113Q5VZT2 155 aa1.73□□□□□ -2.13
RNU4-60P-201ENST00000517239 Q6ZRX8 168 aa1.73□□□□□ -2.13
RNU4-60P-201ENST00000517239 TMEM263Q8WUH6 116 aaKnown RBP1.73□□□□□ -2.13
RNU4-60P-201ENST00000517239 HILPDAQ9Y5L2 63 aa1.73□□□□□ -2.13
RNU4-60P-201ENST00000517239 UBR3Q6ZT12 1888 aa1.73□□□□□ -2.13
RNU4-60P-201ENST00000517239 PAPPAQ13219 1627 aa1.73□□□□□ -2.13
RNU4-60P-201ENST00000517239 F5P12259 2224 aa1.72□□□□□ -2.13
RNU4-60P-201ENST00000517239 MYO7AQ13402 2215 aa1.72□□□□□ -2.13
RNU4-60P-201ENST00000517239 CDC42BPGQ6DT37 1551 aa1.72□□□□□ -2.13
RNU4-60P-201ENST00000517239 SRCAPQ6ZRS2 3230 aa1.72□□□□□ -2.13
RNU4-60P-201ENST00000517239 H3BVH4 76 aa1.72□□□□□ -2.13
RNU4-60P-201ENST00000517239 IFI27P40305 119 aaPredicted RBP1.72□□□□□ -2.13
RNU4-60P-201ENST00000517239 HAMPP81172 84 aa1.72□□□□□ -2.13
RNU4-60P-201ENST00000517239 SPINK13Q1W4C9 94 aa1.72□□□□□ -2.13
RNU4-60P-201ENST00000517239 PLAC4Q8WY50 150 aa1.72□□□□□ -2.13
RNU4-60P-201ENST00000517239 KRTAP4-2Q9BYR5 136 aa1.72□□□□□ -2.13
RNU4-60P-201ENST00000517239 PLAC8Q9NZF1 115 aa1.72□□□□□ -2.13
RNU4-60P-201ENST00000517239 POLR1AO95602 1720 aaPredicted RBP1.71□□□□□ -2.13
RNU4-60P-201ENST00000517239 A0A096LNT2 108 aa1.71□□□□□ -2.14
RNU4-60P-201ENST00000517239 TRBV7-4A0A0J9YYF1 115 aa1.71□□□□□ -2.14
RNU4-60P-201ENST00000517239 G3V318 75 aa1.71□□□□□ -2.14
RNU4-60P-201ENST00000517239 KRTAP10-7P60409 375 aaPredicted RBP1.71□□□□□ -2.14
RNU4-60P-201ENST00000517239 EEA1Q15075 1411 aa1.71□□□□□ -2.14
RNU4-60P-201ENST00000517239 LMTK2Q8IWU2 1503 aa1.71□□□□□ -2.14
RNU4-60P-201ENST00000517239 LRRC7Q96NW7 1537 aa1.71□□□□□ -2.14
RNU4-60P-201ENST00000517239 KMT2BQ9UMN6 2715 aaPredicted RBP1.7□□□□□ -2.14
RNU4-60P-201ENST00000517239 LRP6O75581 1613 aa1.7□□□□□ -2.14
RNU4-60P-201ENST00000517239 TRBV6-1A0A0K0K1D8 114 aa1.7□□□□□ -2.14
RNU4-60P-201ENST00000517239 COX8AP10176 69 aa1.7□□□□□ -2.14
RNU4-60P-201ENST00000517239 KRTAP10-10P60014 251 aa1.7□□□□□ -2.14
RNU4-60P-201ENST00000517239 CACNA1BQ00975 2339 aa1.7□□□□□ -2.14
RNU4-60P-201ENST00000517239 SAMD9Q5K651 1589 aa1.7□□□□□ -2.14
RNU4-60P-201ENST00000517239 SPATA8Q6RVD6 105 aa1.7□□□□□ -2.14
RNU4-60P-201ENST00000517239 PLXNB2O15031 1838 aa1.7□□□□□ -2.14
RNU4-60P-201ENST00000517239 NHSQ6T4R5 1651 aa1.7□□□□□ -2.14
RNU4-60P-201ENST00000517239 PLXNC1O60486 1568 aa1.69□□□□□ -2.14
RNU4-60P-201ENST00000517239 SFTA3P0C7M3 94 aa1.69□□□□□ -2.14
RNU4-60P-201ENST00000517239 RPL37P61927 97 aaKnown RBP1.69□□□□□ -2.14
RNU4-60P-201ENST00000517239 NESP48681 1621 aa1.69□□□□□ -2.14
RNU4-60P-201ENST00000517239 EIF2AK4Q9P2K8 1649 aaKnown RBP1.69□□□□□ -2.14
RNU4-60P-201ENST00000517239 S100A3P33764 101 aa1.68□□□□□ -2.14
RNU4-60P-201ENST00000517239 KRTAP1-1Q07627 177 aa1.68□□□□□ -2.14
RNU4-60P-201ENST00000517239 GNG13Q9P2W3 67 aa1.68□□□□□ -2.14
RNU4-60P-201ENST00000517239 CACNA1CQ13936 2221 aa1.68□□□□□ -2.14
RNU4-60P-201ENST00000517239 ASCC3Q8N3C0 2202 aaKnown RBP1.68□□□□□ -2.14
RNU4-60P-201ENST00000517239 CD163L1Q9NR16 1453 aa1.68□□□□□ -2.14
RNU4-60P-201ENST00000517239 A0A0G2JMZ2 1700 aa1.67□□□□□ -2.14
RNU4-60P-201ENST00000517239 NRAPQ86VF7 1730 aa1.67□□□□□ -2.14
RNU4-60P-201ENST00000517239 A0A1B0GU69 56 aa1.67□□□□□ -2.14
RNU4-60P-201ENST00000517239 PRB1P04280 392 aa1.67□□□□□ -2.14
RNU4-60P-201ENST00000517239 LCE3DQ9BYE3 92 aa1.67□□□□□ -2.14
RNU4-60P-201ENST00000517239 ABCA6Q8N139 1617 aa1.66□□□□□ -2.14
RNU4-60P-201ENST00000517239 USP32Q8NFA0 1604 aa1.66□□□□□ -2.14
RNU4-60P-201ENST00000517239 QSER1Q2KHR3 1735 aa1.66□□□□□ -2.14
RNU4-60P-201ENST00000517239 RICTORQ6R327 1708 aa1.66□□□□□ -2.14
RNU4-60P-201ENST00000517239 WFDC9Q8NEX5 89 aa1.66□□□□□ -2.14
RNU4-60P-201ENST00000517239 ZFHX3Q15911 3703 aa1.65□□□□□ -2.14
RNU4-60P-201ENST00000517239 TRAV21A0A0B4J279 112 aa1.65□□□□□ -2.15
RNU4-60P-201ENST00000517239 DEFB112Q30KQ8 113 aa1.65□□□□□ -2.15
RNU4-60P-201ENST00000517239 KRTAP6-3Q3LI67 103 aa1.65□□□□□ -2.15
RNU4-60P-201ENST00000517239 DOT1LQ8TEK3 1739 aa1.65□□□□□ -2.15
RNU4-60P-201ENST00000517239 KIF21BO75037 1637 aa1.65□□□□□ -2.15
RNU4-60P-201ENST00000517239 ABCA10Q8WWZ4 1543 aa1.65□□□□□ -2.15
RNU4-60P-201ENST00000517239 MROH2AA6NES4 1674 aa1.64□□□□□ -2.15
RNU4-60P-201ENST00000517239 RALGAPBQ86X10 1494 aa1.64□□□□□ -2.15
RNU4-60P-201ENST00000517239 TSC2P49815 1807 aa1.64□□□□□ -2.15
RNU4-60P-201ENST00000517239 FMN2Q9NZ56 1722 aa1.64□□□□□ -2.15
RNU4-60P-201ENST00000517239 PIN1P1O15428 100 aa1.64□□□□□ -2.15
RNU4-60P-201ENST00000517239 NDUFB1O75438 58 aa1.64□□□□□ -2.15
RNU4-60P-201ENST00000517239 C3orf79P0CE67 100 aa1.64□□□□□ -2.15
RNU4-60P-201ENST00000517239 SSBP3-AS1Q7Z2R9 100 aa1.64□□□□□ -2.15
RNU4-60P-201ENST00000517239 DEFB119Q8N690 84 aa1.64□□□□□ -2.15
RNU4-60P-201ENST00000517239 CADP27708 2225 aa1.63□□□□□ -2.15
RNU4-60P-201ENST00000517239 IFI6P09912 130 aa1.63□□□□□ -2.15
RNU4-60P-201ENST00000517239 ATXN8Q156A1 80 aa1.63□□□□□ -2.15
RNU4-60P-201ENST00000517239 SMIM5Q71RC9 77 aa1.63□□□□□ -2.15
RNU4-60P-201ENST00000517239 GAFA1Q96PS6 74 aa1.63□□□□□ -2.15
RNU4-60P-201ENST00000517239 ALS2Q96Q42 1657 aa1.63□□□□□ -2.15
RNU4-60P-201ENST00000517239 ITSN2Q9NZM3 1697 aa1.63□□□□□ -2.15
RNU4-60P-201ENST00000517239 CEP350Q5VT06 3117 aa1.62□□□□□ -2.15
RNU4-60P-201ENST00000517239 KIF1AQ12756 1690 aa1.62□□□□□ -2.15
RNU4-60P-201ENST00000517239 FXYD6-FXYD2A0A087WZ82 144 aa1.62□□□□□ -2.15
RNU4-60P-201ENST00000517239 NREPQ16612 68 aa1.62□□□□□ -2.15
RNU4-60P-201ENST00000517239 UBE2DNLQ8IWF7 75 aa1.62□□□□□ -2.15
RNU4-60P-201ENST00000517239 DIP2AQ14689 1571 aa1.62□□□□□ -2.15
RNU4-60P-201ENST00000517239 LRRC37AA6NMS7 1700 aa1.62□□□□□ -2.15
RNU4-60P-201ENST00000517239 LYNX1P0DP58 116 aa1.61□□□□□ -2.15
RNU4-60P-201ENST00000517239 PRXQ9BXM0 1461 aa1.61□□□□□ -2.15
RNU4-60P-201ENST00000517239 CROCC2H7BZ55 1655 aa1.61□□□□□ -2.15
RNU4-60P-201ENST00000517239 GLI2P10070 1586 aa1.6□□□□□ -2.15
RNU4-60P-201ENST00000517239 RNF17Q9BXT8 1623 aaKnown RBP1.6□□□□□ -2.15
RNU4-60P-201ENST00000517239 FXYD6P3P58550 94 aa1.6□□□□□ -2.15
RNU4-60P-201ENST00000517239 ANKRD50Q9ULJ7 1429 aa1.59□□□□□ -2.15
RNU4-60P-201ENST00000517239 KRTAP13-1Q8IUC0 172 aa1.59□□□□□ -2.15
RNU4-60P-201ENST00000517239 ZDBF2Q9HCK1 2354 aa1.59□□□□□ -2.16
RNU4-60P-201ENST00000517239 TECTAO75443 2155 aa1.59□□□□□ -2.16
RNU4-60P-201ENST00000517239 SLIT1O75093 1534 aa1.59□□□□□ -2.16
RNU4-60P-201ENST00000517239 FBN1P35555 2871 aaKnown RBP1.59□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms