RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 IGLC3P0DOY3 106 aa7.01□□□□□ -1.29
SCARNA20-201ENST00000516768 CKS1BP61024 79 aa7.01□□□□□ -1.29
SCARNA20-201ENST00000516768 RPL37AP61513 92 aaKnown RBP7.01□□□□□ -1.29
SCARNA20-201ENST00000516768 TOMM7Q9P0U1 55 aa7.01□□□□□ -1.29
SCARNA20-201ENST00000516768 A0A1W2PNN7 141 aa7□□□□□ -1.29
SCARNA20-201ENST00000516768 SCO1O75880 301 aa7□□□□□ -1.29
SCARNA20-201ENST00000516768 Q6ZRP5 223 aa7□□□□□ -1.29
SCARNA20-201ENST00000516768 FAM19A2Q8N3H0 131 aa7□□□□□ -1.29
SCARNA20-201ENST00000516768 HSBP1O75506 76 aa6.99□□□□□ -1.29
SCARNA20-201ENST00000516768 RPL18AQ02543 176 aaKnown RBP6.99□□□□□ -1.29
SCARNA20-201ENST00000516768 C9orf116Q5BN46 136 aaPredicted RBP6.99□□□□□ -1.29
SCARNA20-201ENST00000516768 C7orf33Q8WU49 177 aa6.99□□□□□ -1.29
SCARNA20-201ENST00000516768 IFI27L1Q96BM0 104 aa6.99□□□□□ -1.29
SCARNA20-201ENST00000516768 NDUFC2-KCTD14E9PQ53 114 aa6.98□□□□□ -1.29
SCARNA20-201ENST00000516768 F8VRH5 84 aa6.98□□□□□ -1.29
SCARNA20-201ENST00000516768 H3BRM9 83 aa6.98□□□□□ -1.29
SCARNA20-201ENST00000516768 NUPR1O60356 82 aa6.98□□□□□ -1.29
SCARNA20-201ENST00000516768 SPINK8P0C7L1 97 aa6.98□□□□□ -1.29
SCARNA20-201ENST00000516768 LINC00310P59036 64 aa6.98□□□□□ -1.29
SCARNA20-201ENST00000516768 COX7B2Q8TF08 81 aa6.98□□□□□ -1.29
SCARNA20-201ENST00000516768 FLG2Q5D862 2391 aaPredicted RBP6.98□□□□□ -1.29
SCARNA20-201ENST00000516768 TRAV12-1A0A0B4J245 112 aa6.97□□□□□ -1.29
SCARNA20-201ENST00000516768 SERF1AO75920 110 aa6.97□□□□□ -1.29
SCARNA20-201ENST00000516768 ZNF22P17026 224 aaPredicted RBP6.97□□□□□ -1.29
SCARNA20-201ENST00000516768 CXCL5P42830 114 aa6.97□□□□□ -1.29
SCARNA20-201ENST00000516768 GAGE2EQ4V326 116 aa6.97□□□□□ -1.29
SCARNA20-201ENST00000516768 GAGE2DQ9UEU5 116 aa6.97□□□□□ -1.29
SCARNA20-201ENST00000516768 IGLV5-39A0A0G2JS06 123 aa6.96□□□□□ -1.3
SCARNA20-201ENST00000516768 CHTOPQ9Y3Y2 248 aaKnown RBP6.96□□□□□ -1.3
SCARNA20-201ENST00000516768 C11orf86A6NJI1 115 aa6.95□□□□□ -1.3
SCARNA20-201ENST00000516768 LEPROTL1O95214 131 aa6.95□□□□□ -1.3
SCARNA20-201ENST00000516768 VPS13BQ7Z7G8 4022 aa6.94□□□□□ -1.3
SCARNA20-201ENST00000516768 HNRNPA3P51991 378 aaKnown RBP6.94□□□□□ -1.3
SCARNA20-201ENST00000516768 C9orf129Q5T035 196 aaKnown RBP6.94□□□□□ -1.3
SCARNA20-201ENST00000516768 TMEM170BQ5T4T1 132 aa6.94□□□□□ -1.3
SCARNA20-201ENST00000516768 FAM168BA1KXE4 195 aa6.93□□□□□ -1.3
SCARNA20-201ENST00000516768 HIST1H2BKO60814 126 aa6.93□□□□□ -1.3
SCARNA20-201ENST00000516768 HIST1H2BJP06899 126 aa6.93□□□□□ -1.3
SCARNA20-201ENST00000516768 HIST1H2BOP23527 126 aa6.93□□□□□ -1.3
SCARNA20-201ENST00000516768 HIST1H2BBP33778 126 aa6.93□□□□□ -1.3
SCARNA20-201ENST00000516768 HIST1H2BDP58876 126 aa6.93□□□□□ -1.3
SCARNA20-201ENST00000516768 HIST1H2BCP62807 126 aa6.93□□□□□ -1.3
SCARNA20-201ENST00000516768 HIST2H2BEQ16778 126 aa6.93□□□□□ -1.3
SCARNA20-201ENST00000516768 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.93□□□□□ -1.3
SCARNA20-201ENST00000516768 KRTAP7-1Q8IUC3 87 aa6.93□□□□□ -1.3
SCARNA20-201ENST00000516768 HIST1H2BHQ93079 126 aa6.93□□□□□ -1.3
SCARNA20-201ENST00000516768 HIST1H2BNQ99877 126 aa6.93□□□□□ -1.3
SCARNA20-201ENST00000516768 HIST1H2BMQ99879 126 aa6.93□□□□□ -1.3
SCARNA20-201ENST00000516768 KRTAP29-1A8MX34 341 aaPredicted RBP6.92□□□□□ -1.3
SCARNA20-201ENST00000516768 FABP4P15090 132 aa6.92□□□□□ -1.3
SCARNA20-201ENST00000516768 PRR3P79522 188 aaKnown RBP6.92□□□□□ -1.3
SCARNA20-201ENST00000516768 PHF5AQ7RTV0 110 aaKnown RBP6.92□□□□□ -1.3
SCARNA20-201ENST00000516768 HSPB8Q9UJY1 196 aa6.92□□□□□ -1.3
SCARNA20-201ENST00000516768 TMEM223A0PJW6 202 aa6.91□□□□□ -1.3
SCARNA20-201ENST00000516768 ODF1Q14990 250 aa6.91□□□□□ -1.3
SCARNA20-201ENST00000516768 ATP6V1G1O75348 118 aa6.9□□□□□ -1.3
SCARNA20-201ENST00000516768 OXTP01178 125 aa6.9□□□□□ -1.3
SCARNA20-201ENST00000516768 S100A1P23297 94 aa6.9□□□□□ -1.3
SCARNA20-201ENST00000516768 SRSF9Q13242 221 aaKnown RBP eCLIP6.9□□□□□ -1.3
SCARNA20-201ENST00000516768 XAGE1AQ9HD64 81 aa6.9□□□□□ -1.3
SCARNA20-201ENST00000516768 H0Y8G0 127 aa6.89□□□□□ -1.31
SCARNA20-201ENST00000516768 SFTA2Q6UW10 78 aa6.89□□□□□ -1.31
SCARNA20-201ENST00000516768 FAM19A5Q7Z5A7 132 aaPredicted RBP6.89□□□□□ -1.31
SCARNA20-201ENST00000516768 ZNF625Q96I27 306 aaPredicted RBP6.89□□□□□ -1.31
SCARNA20-201ENST00000516768 PSORS1C2Q9UIG4 136 aa6.89□□□□□ -1.31
SCARNA20-201ENST00000516768 COX17Q14061 63 aa6.88□□□□□ -1.31
SCARNA20-201ENST00000516768 KRTAP11-1Q8IUC1 163 aa6.88□□□□□ -1.31
SCARNA20-201ENST00000516768 C22orf24Q9Y442 160 aa6.88□□□□□ -1.31
SCARNA20-201ENST00000516768 MYCBP2O75592 4640 aa6.87□□□□□ -1.31
SCARNA20-201ENST00000516768 M0QXV9 152 aa6.87□□□□□ -1.31
SCARNA20-201ENST00000516768 PFN2P35080 140 aa6.87□□□□□ -1.31
SCARNA20-201ENST00000516768 COA6Q5JTJ3 125 aaKnown RBP6.87□□□□□ -1.31
SCARNA20-201ENST00000516768 SERTAD4-AS1Q5TG53 156 aa6.87□□□□□ -1.31
SCARNA20-201ENST00000516768 SPINK6Q6UWN8 80 aa6.87□□□□□ -1.31
SCARNA20-201ENST00000516768 MAP1LC3CQ9BXW4 147 aa6.87□□□□□ -1.31
SCARNA20-201ENST00000516768 PLA2G2DQ9UNK4 145 aa6.87□□□□□ -1.31
SCARNA20-201ENST00000516768 J3QL48 77 aa6.86□□□□□ -1.31
SCARNA20-201ENST00000516768 PLNP26678 52 aa6.86□□□□□ -1.31
SCARNA20-201ENST00000516768 ERG28Q9UKR5 140 aa6.86□□□□□ -1.31
SCARNA20-201ENST00000516768 DPM2O94777 84 aa6.85□□□□□ -1.31
SCARNA20-201ENST00000516768 LBHQ53QV2 105 aaPredicted RBP6.85□□□□□ -1.31
SCARNA20-201ENST00000516768 C1orf137Q5JT78 98 aa6.85□□□□□ -1.31
SCARNA20-201ENST00000516768 TP73-AS1Q9UF72 201 aa6.85□□□□□ -1.31
SCARNA20-201ENST00000516768 DMBT1Q9UGM3 2413 aaPredicted RBP6.85□□□□□ -1.31
SCARNA20-201ENST00000516768 SYS1-DBNDD2H3BUS1 97 aa6.84□□□□□ -1.31
SCARNA20-201ENST00000516768 IGKCP01834 107 aa6.84□□□□□ -1.31
SCARNA20-201ENST00000516768 UBE2BP63146 152 aa6.84□□□□□ -1.31
SCARNA20-201ENST00000516768 PMCHL2Q9BQD1 86 aa6.84□□□□□ -1.31
SCARNA20-201ENST00000516768 IGLV5-37A0A075B6J1 123 aa6.83□□□□□ -1.32
SCARNA20-201ENST00000516768 LEPROTO15243 131 aa6.83□□□□□ -1.32
SCARNA20-201ENST00000516768 IGLV7-43P04211 117 aa6.83□□□□□ -1.32
SCARNA20-201ENST00000516768 HERV-K104P63124 156 aa6.83□□□□□ -1.32
SCARNA20-201ENST00000516768 MRPL55Q7Z7F7 128 aaKnown RBP6.83□□□□□ -1.32
SCARNA20-201ENST00000516768 SND1-IT1Q9HBX3 110 aa6.83□□□□□ -1.32
SCARNA20-201ENST00000516768 LINC00587B1AMM8 73 aa6.82□□□□□ -1.32
SCARNA20-201ENST00000516768 LINC00158P58513 81 aa6.82□□□□□ -1.32
SCARNA20-201ENST00000516768 PLEKHB2Q96CS7 222 aa6.82□□□□□ -1.32
SCARNA20-201ENST00000516768 LINC00167Q96N53 147 aa6.82□□□□□ -1.32
SCARNA20-201ENST00000516768 NDUFA12Q9UI09 145 aa6.82□□□□□ -1.32
SCARNA20-201ENST00000516768 LRP1Q07954 4544 aaKnown RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms