RNA–Protein interactions for RNA: ENST00000515982.1

SCARNA6-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 265 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6-201ENST00000515982 JOSD1Q15040 202 aaPredicted RBP4.61□□□□□ -1.67
SCARNA6-201ENST00000515982 RNF151Q2KHN1 245 aa4.61□□□□□ -1.67
SCARNA6-201ENST00000515982 LINC00526Q96FQ7 95 aa4.61□□□□□ -1.67
SCARNA6-201ENST00000515982 PKIGQ9Y2B9 76 aa4.61□□□□□ -1.67
SCARNA6-201ENST00000515982 TRBV30A0A0K0K1B3 111 aa4.6□□□□□ -1.67
SCARNA6-201ENST00000515982 A0A1B0GVY2 172 aa4.6□□□□□ -1.67
SCARNA6-201ENST00000515982 SLPIP03973 132 aa4.6□□□□□ -1.67
SCARNA6-201ENST00000515982 STPG4Q8N801 248 aa4.6□□□□□ -1.67
SCARNA6-201ENST00000515982 C9orf163Q8N9P6 203 aa4.6□□□□□ -1.67
SCARNA6-201ENST00000515982 CARD19Q96LW7 228 aa4.6□□□□□ -1.67
SCARNA6-201ENST00000515982 MYMXA0A1B0GTQ4 84 aa4.59□□□□□ -1.67
SCARNA6-201ENST00000515982 LINC00587B1AMM8 73 aa4.59□□□□□ -1.67
SCARNA6-201ENST00000515982 J3QQQ9 107 aa4.59□□□□□ -1.67
SCARNA6-201ENST00000515982 LGALS3P17931 250 aaKnown RBP4.59□□□□□ -1.67
SCARNA6-201ENST00000515982 GCSHP23434 173 aa4.59□□□□□ -1.67
SCARNA6-201ENST00000515982 NMUP48645 174 aa4.59□□□□□ -1.67
SCARNA6-201ENST00000515982 HERV-K104P63124 156 aa4.59□□□□□ -1.67
SCARNA6-201ENST00000515982 UNQ6190/PRO20217Q6UXQ8 127 aa4.59□□□□□ -1.67
SCARNA6-201ENST00000515982 Q6ZRU5 148 aa4.59□□□□□ -1.67
SCARNA6-201ENST00000515982 ATOH7Q8N100 152 aa4.59□□□□□ -1.67
SCARNA6-201ENST00000515982 DNAH2Q9P225 4427 aa4.59□□□□□ -1.67
SCARNA6-201ENST00000515982 KRTAP10-2P60368 255 aa4.58□□□□□ -1.68
SCARNA6-201ENST00000515982 C2orf82Q6UX34 121 aa4.58□□□□□ -1.68
SCARNA6-201ENST00000515982 NDUFA12Q9UI09 145 aa4.58□□□□□ -1.68
SCARNA6-201ENST00000515982 DNAH17Q9UFH2 4485 aa4.58□□□□□ -1.68
SCARNA6-201ENST00000515982 LOC107984640A0A0U1RRK4 108 aa4.57□□□□□ -1.68
SCARNA6-201ENST00000515982 C16orf90A8MZG2 172 aa4.57□□□□□ -1.68
SCARNA6-201ENST00000515982 TLX1NBP0CAT3 122 aa4.57□□□□□ -1.68
SCARNA6-201ENST00000515982 COX17Q14061 63 aa4.57□□□□□ -1.68
SCARNA6-201ENST00000515982 C10orf25Q5T742 122 aa4.57□□□□□ -1.68
SCARNA6-201ENST00000515982 ZNF625Q96I27 306 aaPredicted RBP4.57□□□□□ -1.68
SCARNA6-201ENST00000515982 C6orf48Q9UBA6 75 aa4.57□□□□□ -1.68
SCARNA6-201ENST00000515982 CIRBPQ14011 172 aaKnown RBP4.56□□□□□ -1.68
SCARNA6-201ENST00000515982 ANKRD39Q53RE8 183 aa4.56□□□□□ -1.68
SCARNA6-201ENST00000515982 PYY3Q5JQD4 70 aa4.56□□□□□ -1.68
SCARNA6-201ENST00000515982 SDIM1Q6ZPB5 146 aa4.56□□□□□ -1.68
SCARNA6-201ENST00000515982 VAMP8Q9BV40 100 aa4.56□□□□□ -1.68
SCARNA6-201ENST00000515982 LINC00474Q9P2X8 69 aa4.56□□□□□ -1.68
SCARNA6-201ENST00000515982 ERG28Q9UKR5 140 aa4.56□□□□□ -1.68
SCARNA6-201ENST00000515982 IGKV2D-26A0A0A0MRZ7 120 aa4.55□□□□□ -1.68
SCARNA6-201ENST00000515982 ZNF815PA8K554 130 aa4.55□□□□□ -1.68
SCARNA6-201ENST00000515982 NDUFC2-KCTD14E9PQ53 114 aa4.55□□□□□ -1.68
SCARNA6-201ENST00000515982 FUSP35637 526 aaKnown RBP eCLIP4.55□□□□□ -1.68
SCARNA6-201ENST00000515982 TSPEAR-AS2P59090 65 aa4.55□□□□□ -1.68
SCARNA6-201ENST00000515982 S100A12P80511 92 aa4.55□□□□□ -1.68
SCARNA6-201ENST00000515982 MEIG1Q5JSS6 88 aa4.55□□□□□ -1.68
SCARNA6-201ENST00000515982 DPH3Q96FX2 82 aa4.55□□□□□ -1.68
SCARNA6-201ENST00000515982 LOC105371267A0A1B0GV96 52 aa4.54□□□□□ -1.68
SCARNA6-201ENST00000515982 LINC00158P58513 81 aa4.54□□□□□ -1.68
SCARNA6-201ENST00000515982 GAGE2BQ13066 116 aa4.54□□□□□ -1.68
SCARNA6-201ENST00000515982 MAJINQ3KP22 176 aa4.54□□□□□ -1.68
SCARNA6-201ENST00000515982 LINC01620Q4KN68 170 aa4.54□□□□□ -1.68
SCARNA6-201ENST00000515982 SPATA45Q537H7 98 aa4.54□□□□□ -1.68
SCARNA6-201ENST00000515982 C9orf116Q5BN46 136 aaPredicted RBP4.54□□□□□ -1.68
SCARNA6-201ENST00000515982 PAM16Q9Y3D7 125 aa4.54□□□□□ -1.68
SCARNA6-201ENST00000515982 PKHD1P08F94 4074 aa4.54□□□□□ -1.68
SCARNA6-201ENST00000515982 DMBT1Q9UGM3 2413 aaPredicted RBP4.54□□□□□ -1.68
SCARNA6-201ENST00000515982 FAT2Q9NYQ8 4349 aa4.53□□□□□ -1.68
SCARNA6-201ENST00000515982 A0A0J9YXY3 114 aa4.53□□□□□ -1.68
SCARNA6-201ENST00000515982 TIMM17BO60830 172 aa4.53□□□□□ -1.68
SCARNA6-201ENST00000515982 PFN2P35080 140 aa4.53□□□□□ -1.68
SCARNA6-201ENST00000515982 PTTG1IPP53801 180 aa4.53□□□□□ -1.68
SCARNA6-201ENST00000515982 KRTAP10-1P60331 282 aa4.53□□□□□ -1.68
SCARNA6-201ENST00000515982 RPL18AQ02543 176 aaKnown RBP4.53□□□□□ -1.68
SCARNA6-201ENST00000515982 GAGE2EQ4V326 116 aa4.53□□□□□ -1.68
SCARNA6-201ENST00000515982 SCGB1D4Q6XE38 83 aa4.53□□□□□ -1.68
SCARNA6-201ENST00000515982 Q6ZRP5 223 aa4.53□□□□□ -1.68
SCARNA6-201ENST00000515982 GAGE2DQ9UEU5 116 aa4.53□□□□□ -1.68
SCARNA6-201ENST00000515982 HERC1Q15751 4861 aa4.53□□□□□ -1.68
SCARNA6-201ENST00000515982 IGKV2-24A0A0C4DH68 120 aa4.52□□□□□ -1.69
SCARNA6-201ENST00000515982 DLEU1O43261 78 aa4.52□□□□□ -1.69
SCARNA6-201ENST00000515982 SMIM6P0DI80 62 aa4.52□□□□□ -1.69
SCARNA6-201ENST00000515982 SMIM13P0DJ93 91 aa4.52□□□□□ -1.69
SCARNA6-201ENST00000515982 COX8AP10176 69 aa4.52□□□□□ -1.69
SCARNA6-201ENST00000515982 PCP2Q8IVA1 136 aa4.52□□□□□ -1.69
SCARNA6-201ENST00000515982 DNAH11Q96DT5 4516 aa4.52□□□□□ -1.69
SCARNA6-201ENST00000515982 PKD1P98161 4303 aa4.51□□□□□ -1.69
SCARNA6-201ENST00000515982 A0A096LNI7 61 aa4.51□□□□□ -1.69
SCARNA6-201ENST00000515982 A0A0U1RRA0 63 aa4.51□□□□□ -1.69
SCARNA6-201ENST00000515982 Q6ZSA8 131 aa4.51□□□□□ -1.69
SCARNA6-201ENST00000515982 Q6ZVH6 145 aa4.51□□□□□ -1.69
SCARNA6-201ENST00000515982 BOD1L2Q8IYS8 172 aa4.51□□□□□ -1.69
SCARNA6-201ENST00000515982 COPS9Q8WXC6 57 aa4.51□□□□□ -1.69
SCARNA6-201ENST00000515982 TTTY13Q9BZ97 58 aa4.51□□□□□ -1.69
SCARNA6-201ENST00000515982 SND1-IT1Q9HBX3 110 aa4.51□□□□□ -1.69
SCARNA6-201ENST00000515982 TMEM238C9JI98 176 aa4.5□□□□□ -1.69
SCARNA6-201ENST00000515982 CHTF8P0CG12 524 aa4.5□□□□□ -1.69
SCARNA6-201ENST00000515982 RPL24P83731 157 aaKnown RBP4.5□□□□□ -1.69
SCARNA6-201ENST00000515982 SLC25A34Q6PIV7 304 aa4.5□□□□□ -1.69
SCARNA6-201ENST00000515982 MIR7-3HGQ8N6C7 128 aa4.5□□□□□ -1.69
SCARNA6-201ENST00000515982 SPACA4Q8TDM5 124 aa4.5□□□□□ -1.69
SCARNA6-201ENST00000515982 C14orf144Q96I85 54 aa4.5□□□□□ -1.69
SCARNA6-201ENST00000515982 MIEN1Q9BRT3 115 aa4.5□□□□□ -1.69
SCARNA6-201ENST00000515982 XAGE1AQ9HD64 81 aa4.5□□□□□ -1.69
SCARNA6-201ENST00000515982 FAM30AQ9NZY2 134 aa4.5□□□□□ -1.69
SCARNA6-201ENST00000515982 PLA2G2DQ9UNK4 145 aa4.5□□□□□ -1.69
SCARNA6-201ENST00000515982 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.5□□□□□ -1.69
SCARNA6-201ENST00000515982 DYNC1H1Q14204 4646 aaKnown RBP4.5□□□□□ -1.69
SCARNA6-201ENST00000515982 A0A087WYN8 130 aa4.49□□□□□ -1.69
SCARNA6-201ENST00000515982 LOC107984156A0A0G2JMH3 177 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms