RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.78□□□□□ -1.16
PDLIM5-220ENST00000514830 SYCNQ0VAF6 134 aa7.78□□□□□ -1.16
PDLIM5-220ENST00000514830 DNAH11Q96DT5 4516 aa7.78□□□□□ -1.16
PDLIM5-220ENST00000514830 TRBV30A0A0K0K1B3 111 aa7.77□□□□□ -1.17
PDLIM5-220ENST00000514830 J3QQQ9 107 aa7.77□□□□□ -1.17
PDLIM5-220ENST00000514830 NMUP48645 174 aa7.77□□□□□ -1.17
PDLIM5-220ENST00000514830 CKS1BP61024 79 aa7.77□□□□□ -1.17
PDLIM5-220ENST00000514830 PYY3Q5JQD4 70 aa7.77□□□□□ -1.17
PDLIM5-220ENST00000514830 STPG4Q8N801 248 aa7.77□□□□□ -1.17
PDLIM5-220ENST00000514830 C9orf163Q8N9P6 203 aa7.77□□□□□ -1.17
PDLIM5-220ENST00000514830 ZNF625Q96I27 306 aaPredicted RBP7.77□□□□□ -1.17
PDLIM5-220ENST00000514830 CAMK2N2Q96S95 79 aa7.77□□□□□ -1.17
PDLIM5-220ENST00000514830 TOMM7Q9P0U1 55 aa7.77□□□□□ -1.17
PDLIM5-220ENST00000514830 ATOH7Q8N100 152 aa7.76□□□□□ -1.17
PDLIM5-220ENST00000514830 LINC00526Q96FQ7 95 aa7.76□□□□□ -1.17
PDLIM5-220ENST00000514830 CARD19Q96LW7 228 aa7.76□□□□□ -1.17
PDLIM5-220ENST00000514830 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.75□□□□□ -1.17
PDLIM5-220ENST00000514830 LOC105371267A0A1B0GV96 52 aa7.75□□□□□ -1.17
PDLIM5-220ENST00000514830 HSBP1L1C9JCN9 74 aa7.75□□□□□ -1.17
PDLIM5-220ENST00000514830 TSPEAR-AS2P59090 65 aa7.75□□□□□ -1.17
PDLIM5-220ENST00000514830 KRTAP10-2P60368 255 aa7.75□□□□□ -1.17
PDLIM5-220ENST00000514830 C2orf82Q6UX34 121 aa7.75□□□□□ -1.17
PDLIM5-220ENST00000514830 UNQ6190/PRO20217Q6UXQ8 127 aa7.75□□□□□ -1.17
PDLIM5-220ENST00000514830 Q6ZRU5 148 aa7.75□□□□□ -1.17
PDLIM5-220ENST00000514830 PKIGQ9Y2B9 76 aa7.75□□□□□ -1.17
PDLIM5-220ENST00000514830 PCLOQ9Y6V0 5065 aa7.75□□□□□ -1.17
PDLIM5-220ENST00000514830 IGLV5-52A0A0A0MRZ9 124 aa7.74□□□□□ -1.17
PDLIM5-220ENST00000514830 TLX1NBP0CAT3 122 aa7.74□□□□□ -1.17
PDLIM5-220ENST00000514830 HERV-K104P63124 156 aa7.74□□□□□ -1.17
PDLIM5-220ENST00000514830 ANKRD39Q53RE8 183 aa7.74□□□□□ -1.17
PDLIM5-220ENST00000514830 C10orf25Q5T742 122 aa7.74□□□□□ -1.17
PDLIM5-220ENST00000514830 C6orf48Q9UBA6 75 aa7.74□□□□□ -1.17
PDLIM5-220ENST00000514830 NDUFA12Q9UI09 145 aa7.74□□□□□ -1.17
PDLIM5-220ENST00000514830 IGKV2D-26A0A0A0MRZ7 120 aa7.73□□□□□ -1.17
PDLIM5-220ENST00000514830 MYMXA0A1B0GTQ4 84 aa7.73□□□□□ -1.17
PDLIM5-220ENST00000514830 LGALS3P17931 250 aaKnown RBP7.73□□□□□ -1.17
PDLIM5-220ENST00000514830 RYR1P21817 5038 aa7.72□□□□□ -1.17
PDLIM5-220ENST00000514830 COX17Q14061 63 aa7.72□□□□□ -1.17
PDLIM5-220ENST00000514830 MAJINQ3KP22 176 aa7.72□□□□□ -1.17
PDLIM5-220ENST00000514830 SDIM1Q6ZPB5 146 aa7.72□□□□□ -1.17
PDLIM5-220ENST00000514830 LOC107984640A0A0U1RRK4 108 aa7.71□□□□□ -1.18
PDLIM5-220ENST00000514830 LINC00587B1AMM8 73 aa7.71□□□□□ -1.18
PDLIM5-220ENST00000514830 SMIM6P0DI80 62 aa7.71□□□□□ -1.18
PDLIM5-220ENST00000514830 NDUFC2-KCTD14E9PQ53 114 aa7.7□□□□□ -1.18
PDLIM5-220ENST00000514830 GCSHP23434 173 aa7.7□□□□□ -1.18
PDLIM5-220ENST00000514830 VAMP8Q9BV40 100 aa7.7□□□□□ -1.18
PDLIM5-220ENST00000514830 ERG28Q9UKR5 140 aa7.69□□□□□ -1.18
PDLIM5-220ENST00000514830 PKHD1P08F94 4074 aa7.69□□□□□ -1.18
PDLIM5-220ENST00000514830 KIAA1109Q2LD37 5005 aa7.69□□□□□ -1.18
PDLIM5-220ENST00000514830 DNAH5Q8TE73 4624 aa7.68□□□□□ -1.18
PDLIM5-220ENST00000514830 ZNF815PA8K554 130 aa7.68□□□□□ -1.18
PDLIM5-220ENST00000514830 C16orf90A8MZG2 172 aa7.68□□□□□ -1.18
PDLIM5-220ENST00000514830 DLEU1O43261 78 aa7.68□□□□□ -1.18
PDLIM5-220ENST00000514830 TIMM17BO60830 172 aa7.68□□□□□ -1.18
PDLIM5-220ENST00000514830 CIRBPQ14011 172 aaKnown RBP7.68□□□□□ -1.18
PDLIM5-220ENST00000514830 SPATA45Q537H7 98 aa7.68□□□□□ -1.18
PDLIM5-220ENST00000514830 A0A0J9YXY3 114 aa7.67□□□□□ -1.18
PDLIM5-220ENST00000514830 COX8AP10176 69 aa7.67□□□□□ -1.18
PDLIM5-220ENST00000514830 C9orf116Q5BN46 136 aaPredicted RBP7.67□□□□□ -1.18
PDLIM5-220ENST00000514830 Q6ZSA8 131 aa7.67□□□□□ -1.18
PDLIM5-220ENST00000514830 PCP2Q8IVA1 136 aa7.67□□□□□ -1.18
PDLIM5-220ENST00000514830 BOD1L2Q8IYS8 172 aa7.67□□□□□ -1.18
PDLIM5-220ENST00000514830 LINC00474Q9P2X8 69 aa7.67□□□□□ -1.18
PDLIM5-220ENST00000514830 PAM16Q9Y3D7 125 aa7.67□□□□□ -1.18
PDLIM5-220ENST00000514830 FUSP35637 526 aaKnown RBP eCLIP7.66□□□□□ -1.18
PDLIM5-220ENST00000514830 PTTG1IPP53801 180 aa7.66□□□□□ -1.18
PDLIM5-220ENST00000514830 S100A12P80511 92 aa7.66□□□□□ -1.18
PDLIM5-220ENST00000514830 Q6ZRP5 223 aa7.66□□□□□ -1.18
PDLIM5-220ENST00000514830 TTTY13Q9BZ97 58 aa7.66□□□□□ -1.18
PDLIM5-220ENST00000514830 KRTAP10-1P60331 282 aa7.65□□□□□ -1.18
PDLIM5-220ENST00000514830 LINC01620Q4KN68 170 aa7.65□□□□□ -1.18
PDLIM5-220ENST00000514830 A0A096LNI7 61 aa7.64□□□□□ -1.19
PDLIM5-220ENST00000514830 LOC107984156A0A0G2JMH3 177 aa7.64□□□□□ -1.19
PDLIM5-220ENST00000514830 EPM2AB3EWF7 344 aa7.64□□□□□ -1.19
PDLIM5-220ENST00000514830 SMIM13P0DJ93 91 aa7.64□□□□□ -1.19
PDLIM5-220ENST00000514830 MEIG1Q5JSS6 88 aa7.64□□□□□ -1.19
PDLIM5-220ENST00000514830 ARL17AQ8IVW1 177 aa7.64□□□□□ -1.19
PDLIM5-220ENST00000514830 SPACA4Q8TDM5 124 aa7.64□□□□□ -1.19
PDLIM5-220ENST00000514830 LITAFQ99732 161 aa7.64□□□□□ -1.19
PDLIM5-220ENST00000514830 PPDPFQ9H3Y8 114 aa7.64□□□□□ -1.19
PDLIM5-220ENST00000514830 PFN2P35080 140 aa7.63□□□□□ -1.19
PDLIM5-220ENST00000514830 LINC00158P58513 81 aa7.63□□□□□ -1.19
PDLIM5-220ENST00000514830 RPL18AQ02543 176 aaKnown RBP7.63□□□□□ -1.19
PDLIM5-220ENST00000514830 TMEM238C9JI98 176 aa7.62□□□□□ -1.19
PDLIM5-220ENST00000514830 SLC25A34Q6PIV7 304 aa7.62□□□□□ -1.19
PDLIM5-220ENST00000514830 SCGB1D4Q6XE38 83 aa7.62□□□□□ -1.19
PDLIM5-220ENST00000514830 Q6ZVH6 145 aa7.62□□□□□ -1.19
PDLIM5-220ENST00000514830 SPANXDQ9BXN6 97 aa7.62□□□□□ -1.19
PDLIM5-220ENST00000514830 SPANXCQ9NY87 97 aa7.62□□□□□ -1.19
PDLIM5-220ENST00000514830 PLA2G2DQ9UNK4 145 aa7.62□□□□□ -1.19
PDLIM5-220ENST00000514830 GAGE2BQ13066 116 aa7.61□□□□□ -1.19
PDLIM5-220ENST00000514830 C9orf129Q5T035 196 aaKnown RBP7.61□□□□□ -1.19
PDLIM5-220ENST00000514830 ADAMTSL4-AS1Q5T5F5 129 aa7.61□□□□□ -1.19
PDLIM5-220ENST00000514830 MIR7-3HGQ8N6C7 128 aa7.61□□□□□ -1.19
PDLIM5-220ENST00000514830 SND1-IT1Q9HBX3 110 aa7.61□□□□□ -1.19
PDLIM5-220ENST00000514830 SPANXB1Q9NS25 103 aaPredicted RBP7.61□□□□□ -1.19
PDLIM5-220ENST00000514830 HIGD1BQ9P298 99 aa7.61□□□□□ -1.19
PDLIM5-220ENST00000514830 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.61□□□□□ -1.19
PDLIM5-220ENST00000514830 DYNC1H1Q14204 4646 aaKnown RBP7.61□□□□□ -1.19
PDLIM5-220ENST00000514830 DNAH8Q96JB1 4490 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms