RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 SMIM1B2RUZ4 78 aa8.84□□□□□ -0.99
USP46-209ENST00000514536 PTTG1IPP53801 180 aa8.84□□□□□ -0.99
USP46-209ENST00000514536 CKS1BP61024 79 aa8.84□□□□□ -0.99
USP46-209ENST00000514536 Q8IZM0 81 aa8.84□□□□□ -0.99
USP46-209ENST00000514536 STPG4Q8N801 248 aa8.84□□□□□ -0.99
USP46-209ENST00000514536 LINC00474Q9P2X8 69 aa8.84□□□□□ -0.99
USP46-209ENST00000514536 SPINK8P0C7L1 97 aa8.83□□□□□ -1
USP46-209ENST00000514536 S100A1P23297 94 aa8.83□□□□□ -1
USP46-209ENST00000514536 RPL18AQ02543 176 aaKnown RBP8.83□□□□□ -1
USP46-209ENST00000514536 PLAC8Q9NZF1 115 aa8.83□□□□□ -1
USP46-209ENST00000514536 H3BRM9 83 aa8.82□□□□□ -1
USP46-209ENST00000514536 HIST1H2BKO60814 126 aa8.82□□□□□ -1
USP46-209ENST00000514536 HIST1H2BJP06899 126 aa8.82□□□□□ -1
USP46-209ENST00000514536 HIST1H2BOP23527 126 aa8.82□□□□□ -1
USP46-209ENST00000514536 HIST1H2BBP33778 126 aa8.82□□□□□ -1
USP46-209ENST00000514536 HIST1H2BDP58876 126 aa8.82□□□□□ -1
USP46-209ENST00000514536 HIST1H2BCP62807 126 aa8.82□□□□□ -1
USP46-209ENST00000514536 HIST2H2BEQ16778 126 aa8.82□□□□□ -1
USP46-209ENST00000514536 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.82□□□□□ -1
USP46-209ENST00000514536 HIST1H2BHQ93079 126 aa8.82□□□□□ -1
USP46-209ENST00000514536 HIST1H2BNQ99877 126 aa8.82□□□□□ -1
USP46-209ENST00000514536 HIST1H2BMQ99879 126 aa8.82□□□□□ -1
USP46-209ENST00000514536 CHTOPQ9Y3Y2 248 aaKnown RBP8.82□□□□□ -1
USP46-209ENST00000514536 TRBV30A0A0K0K1B3 111 aa8.82□□□□□ -1
USP46-209ENST00000514536 ATP6V1G1O75348 118 aa8.82□□□□□ -1
USP46-209ENST00000514536 PLA2G1BP04054 148 aaKnown RBP8.82□□□□□ -1
USP46-209ENST00000514536 ZNF22P17026 224 aaPredicted RBP8.82□□□□□ -1
USP46-209ENST00000514536 COX7B2Q8TF08 81 aa8.82□□□□□ -1
USP46-209ENST00000514536 TRAV12-1A0A0B4J245 112 aa8.81□□□□□ -1
USP46-209ENST00000514536 C11orf86A6NJI1 115 aa8.81□□□□□ -1
USP46-209ENST00000514536 LEPROTL1O95214 131 aa8.81□□□□□ -1
USP46-209ENST00000514536 C9orf116Q5BN46 136 aaPredicted RBP8.81□□□□□ -1
USP46-209ENST00000514536 FABP4P15090 132 aa8.8□□□□□ -1
USP46-209ENST00000514536 FAT1Q14517 4588 aa8.8□□□□□ -1
USP46-209ENST00000514536 TLX1NBP0CAT3 122 aa8.79□□□□□ -1
USP46-209ENST00000514536 INAFM2P0DMQ5 153 aa8.79□□□□□ -1
USP46-209ENST00000514536 GAGE2EQ4V326 116 aa8.79□□□□□ -1
USP46-209ENST00000514536 TMEM170BQ5T4T1 132 aa8.79□□□□□ -1
USP46-209ENST00000514536 Q6ZRP5 223 aa8.79□□□□□ -1
USP46-209ENST00000514536 GAGE2DQ9UEU5 116 aa8.79□□□□□ -1
USP46-209ENST00000514536 F8VRH5 84 aa8.78□□□□□ -1
USP46-209ENST00000514536 H0Y8G0 127 aa8.78□□□□□ -1
USP46-209ENST00000514536 CXCL5P42830 114 aa8.78□□□□□ -1
USP46-209ENST00000514536 A0A1W2PNN7 141 aa8.78□□□□□ -1
USP46-209ENST00000514536 RPL37AP61513 92 aaKnown RBP8.78□□□□□ -1
USP46-209ENST00000514536 HSPB8Q9UJY1 196 aa8.78□□□□□ -1
USP46-209ENST00000514536 IGLV5-39A0A0G2JS06 123 aa8.77□□□□□ -1.01
USP46-209ENST00000514536 NDUFC2-KCTD14E9PQ53 114 aa8.77□□□□□ -1.01
USP46-209ENST00000514536 KRTAP10-4P60372 401 aaPredicted RBP8.76□□□□□ -1.01
USP46-209ENST00000514536 C7orf33Q8WU49 177 aa8.76□□□□□ -1.01
USP46-209ENST00000514536 HERC1Q15751 4861 aa8.76□□□□□ -1.01
USP46-209ENST00000514536 ODF1Q14990 250 aa8.75□□□□□ -1.01
USP46-209ENST00000514536 TMEM223A0PJW6 202 aa8.73□□□□□ -1.01
USP46-209ENST00000514536 FAM168BA1KXE4 195 aa8.73□□□□□ -1.01
USP46-209ENST00000514536 VPS13BQ7Z7G8 4022 aa8.73□□□□□ -1.01
USP46-209ENST00000514536 SRRM2Q9UQ35 2752 aaKnown RBP8.73□□□□□ -1.01
USP46-209ENST00000514536 C9orf129Q5T035 196 aaKnown RBP8.72□□□□□ -1.01
USP46-209ENST00000514536 PMCHL2Q9BQD1 86 aa8.72□□□□□ -1.01
USP46-209ENST00000514536 MAP1LC3CQ9BXW4 147 aa8.72□□□□□ -1.01
USP46-209ENST00000514536 FAM19A5Q7Z5A7 132 aaPredicted RBP8.71□□□□□ -1.02
USP46-209ENST00000514536 XAGE1AQ9HD64 81 aa8.71□□□□□ -1.02
USP46-209ENST00000514536 COA6Q5JTJ3 125 aaKnown RBP8.7□□□□□ -1.02
USP46-209ENST00000514536 PHF5AQ7RTV0 110 aaKnown RBP8.7□□□□□ -1.02
USP46-209ENST00000514536 KRTAP7-1Q8IUC3 87 aa8.7□□□□□ -1.02
USP46-209ENST00000514536 PLNP26678 52 aa8.69□□□□□ -1.02
USP46-209ENST00000514536 ZNF625Q96I27 306 aaPredicted RBP8.69□□□□□ -1.02
USP46-209ENST00000514536 DPM2O94777 84 aa8.69□□□□□ -1.02
USP46-209ENST00000514536 PFN2P35080 140 aa8.69□□□□□ -1.02
USP46-209ENST00000514536 HNRNPA3P51991 378 aaKnown RBP8.69□□□□□ -1.02
USP46-209ENST00000514536 SYS1-DBNDD2H3BUS1 97 aa8.68□□□□□ -1.02
USP46-209ENST00000514536 IGKCP01834 107 aa8.67□□□□□ -1.02
USP46-209ENST00000514536 PRR3P79522 188 aaKnown RBP8.67□□□□□ -1.02
USP46-209ENST00000514536 ERG28Q9UKR5 140 aa8.67□□□□□ -1.02
USP46-209ENST00000514536 MYCBP2O75592 4640 aa8.67□□□□□ -1.02
USP46-209ENST00000514536 DMBT1Q9UGM3 2413 aaPredicted RBP8.67□□□□□ -1.02
USP46-209ENST00000514536 SERTAD4-AS1Q5TG53 156 aa8.66□□□□□ -1.02
USP46-209ENST00000514536 SFTA2Q6UW10 78 aa8.66□□□□□ -1.02
USP46-209ENST00000514536 FLG2Q5D862 2391 aaPredicted RBP8.66□□□□□ -1.02
USP46-209ENST00000514536 M0QXV9 152 aa8.65□□□□□ -1.02
USP46-209ENST00000514536 LEPROTO15243 131 aa8.64□□□□□ -1.03
USP46-209ENST00000514536 C3orf79P0CE67 100 aa8.64□□□□□ -1.03
USP46-209ENST00000514536 HERVK_113P61574 105 aa8.64□□□□□ -1.03
USP46-209ENST00000514536 COX17Q14061 63 aa8.64□□□□□ -1.03
USP46-209ENST00000514536 PET117Q6UWS5 81 aa8.64□□□□□ -1.03
USP46-209ENST00000514536 PSORS1C2Q9UIG4 136 aa8.64□□□□□ -1.03
USP46-209ENST00000514536 C22orf24Q9Y442 160 aa8.64□□□□□ -1.03
USP46-209ENST00000514536 LINC00158P58513 81 aa8.63□□□□□ -1.03
USP46-209ENST00000514536 LINC01545Q5VT33 79 aa8.63□□□□□ -1.03
USP46-209ENST00000514536 KRTAP11-1Q8IUC1 163 aa8.63□□□□□ -1.03
USP46-209ENST00000514536 PLEKHB2Q96CS7 222 aa8.63□□□□□ -1.03
USP46-209ENST00000514536 NDUFA12Q9UI09 145 aa8.63□□□□□ -1.03
USP46-209ENST00000514536 A0A0U1RRA0 63 aa8.62□□□□□ -1.03
USP46-209ENST00000514536 TSPEAR-AS2P59090 65 aa8.62□□□□□ -1.03
USP46-209ENST00000514536 KRTDAPP60985 99 aa8.62□□□□□ -1.03
USP46-209ENST00000514536 UBE2BP63146 152 aa8.62□□□□□ -1.03
USP46-209ENST00000514536 SND1-IT1Q9HBX3 110 aa8.62□□□□□ -1.03
USP46-209ENST00000514536 MYMXA0A1B0GTQ4 84 aa8.61□□□□□ -1.03
USP46-209ENST00000514536 PLA2G2DQ9UNK4 145 aa8.61□□□□□ -1.03
USP46-209ENST00000514536 J3QQQ9 107 aa8.61□□□□□ -1.03
USP46-209ENST00000514536 HERV-K104P63124 156 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms