RNA–Protein interactions for RNA: ENST00000514335.1

NIPBL-208, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-208ENST00000514335 C17orf58Q2M2W7 97 aa4.83□□□□□ -1.64
NIPBL-208ENST00000514335 C9orf47Q6ZRZ4 202 aa4.83□□□□□ -1.64
NIPBL-208ENST00000514335 OCR1Q9BZK8 76 aa4.83□□□□□ -1.64
NIPBL-208ENST00000514335 RPL37AP8A6NKH3 93 aa4.82□□□□□ -1.64
NIPBL-208ENST00000514335 Q8NDZ9 215 aa4.82□□□□□ -1.64
NIPBL-208ENST00000514335 KNL1Q8NG31 2342 aa4.82□□□□□ -1.64
NIPBL-208ENST00000514335 TRBV6-5A0A0K0K1A5 114 aa4.82□□□□□ -1.64
NIPBL-208ENST00000514335 A8MWP4 228 aa4.82□□□□□ -1.64
NIPBL-208ENST00000514335 HAMPP81172 84 aa4.82□□□□□ -1.64
NIPBL-208ENST00000514335 LUZP6Q538Z0 58 aa4.82□□□□□ -1.64
NIPBL-208ENST00000514335 Q6ZTI0 123 aa4.82□□□□□ -1.64
NIPBL-208ENST00000514335 C2orf66Q6UXQ4 117 aa4.81□□□□□ -1.64
NIPBL-208ENST00000514335 FAM104AQ969W3 186 aa4.81□□□□□ -1.64
NIPBL-208ENST00000514335 LAMA5O15230 3695 aa4.81□□□□□ -1.64
NIPBL-208ENST00000514335 IGHV3-48P01763 117 aa4.81□□□□□ -1.64
NIPBL-208ENST00000514335 TTTY12Q9BZ98 90 aa4.81□□□□□ -1.64
NIPBL-208ENST00000514335 NAV3Q8IVL0 2385 aa4.8□□□□□ -1.64
NIPBL-208ENST00000514335 TRBV10-1A0A0K0K1A3 114 aa4.8□□□□□ -1.64
NIPBL-208ENST00000514335 SPINK7P58062 85 aa4.8□□□□□ -1.64
NIPBL-208ENST00000514335 DEFB113Q30KQ7 82 aa4.8□□□□□ -1.64
NIPBL-208ENST00000514335 ITPR2Q14571 2701 aa4.8□□□□□ -1.64
NIPBL-208ENST00000514335 RTTNQ86VV8 2226 aa4.8□□□□□ -1.64
NIPBL-208ENST00000514335 IGHV1-3A0A0C4DH29 117 aa4.79□□□□□ -1.64
NIPBL-208ENST00000514335 SAA2P0DJI9 122 aaPredicted RBP4.79□□□□□ -1.64
NIPBL-208ENST00000514335 EIF4EBP1Q13541 118 aaPredicted RBP4.79□□□□□ -1.64
NIPBL-208ENST00000514335 LCE2CQ5TA81 110 aa4.79□□□□□ -1.64
NIPBL-208ENST00000514335 ZFP36P26651 326 aaKnown RBP4.79□□□□□ -1.64
NIPBL-208ENST00000514335 FLVCR1-AS1Q8TAF5 88 aa4.79□□□□□ -1.64
NIPBL-208ENST00000514335 SETD2Q9BYW2 2564 aaPredicted RBP4.79□□□□□ -1.64
NIPBL-208ENST00000514335 NBPF19A0A087WUL8 3843 aa4.79□□□□□ -1.64
NIPBL-208ENST00000514335 A0A087WYN8 130 aa4.79□□□□□ -1.64
NIPBL-208ENST00000514335 IGHV4-61A0A0C4DH41 118 aa4.79□□□□□ -1.64
NIPBL-208ENST00000514335 C17orf98A8MV24 154 aa4.79□□□□□ -1.64
NIPBL-208ENST00000514335 IGHV4-59P01825 116 aa4.79□□□□□ -1.64
NIPBL-208ENST00000514335 Q6ZQT0 140 aa4.79□□□□□ -1.64
NIPBL-208ENST00000514335 MRPL36Q9P0J6 103 aaKnown RBP4.79□□□□□ -1.64
NIPBL-208ENST00000514335 SPG11Q96JI7 2443 aa4.79□□□□□ -1.64
NIPBL-208ENST00000514335 WDFY3Q8IZQ1 3526 aa4.78□□□□□ -1.64
NIPBL-208ENST00000514335 A0A087X002 238 aa4.78□□□□□ -1.64
NIPBL-208ENST00000514335 SMIM2Q9BVW6 85 aa4.78□□□□□ -1.64
NIPBL-208ENST00000514335 CLPSP04118 112 aa4.78□□□□□ -1.64
NIPBL-208ENST00000514335 KRTAP1-3Q8IUG1 177 aa4.78□□□□□ -1.64
NIPBL-208ENST00000514335 FLNCQ14315 2725 aa4.78□□□□□ -1.64
NIPBL-208ENST00000514335 IGHV3OR16-8A0A075B7F1 116 aa4.77□□□□□ -1.65
NIPBL-208ENST00000514335 COX7A1P24310 79 aa4.77□□□□□ -1.65
NIPBL-208ENST00000514335 IGHV3-43A0A0B4J1X8 118 aa4.77□□□□□ -1.65
NIPBL-208ENST00000514335 IGLV1-44P01699 117 aa4.77□□□□□ -1.65
NIPBL-208ENST00000514335 EGFEM1PQ0D2K5 195 aa4.77□□□□□ -1.65
NIPBL-208ENST00000514335 C10orf113Q5VZT2 155 aa4.77□□□□□ -1.65
NIPBL-208ENST00000514335 IGHV4-28A0A0C4DH34 117 aa4.76□□□□□ -1.65
NIPBL-208ENST00000514335 IGHV3-35A0A0C4DH35 117 aa4.76□□□□□ -1.65
NIPBL-208ENST00000514335 IGKV1-17P01599 117 aa4.76□□□□□ -1.65
NIPBL-208ENST00000514335 Q8TAT8 98 aa4.76□□□□□ -1.65
NIPBL-208ENST00000514335 IGLV2-23P01705 113 aa4.76□□□□□ -1.65
NIPBL-208ENST00000514335 IGHV4-30-4P0DP06 118 aa4.75□□□□□ -1.65
NIPBL-208ENST00000514335 ORMDL1Q9P0S3 153 aa4.75□□□□□ -1.65
NIPBL-208ENST00000514335 IGKV2-29A2NJV5 120 aaPredicted RBP4.75□□□□□ -1.65
NIPBL-208ENST00000514335 PPP1R17O96001 155 aa4.75□□□□□ -1.65
NIPBL-208ENST00000514335 LAMA1P25391 3075 aa4.74□□□□□ -1.65
NIPBL-208ENST00000514335 TRBV6-1A0A0K0K1D8 114 aa4.74□□□□□ -1.65
NIPBL-208ENST00000514335 DNAJC9-AS1A6NH13 148 aa4.74□□□□□ -1.65
NIPBL-208ENST00000514335 IGLV3-1P01715 115 aa4.74□□□□□ -1.65
NIPBL-208ENST00000514335 ZCCHC13Q8WW36 166 aaKnown RBP4.74□□□□□ -1.65
NIPBL-208ENST00000514335 CNFNQ9BYD5 112 aa4.74□□□□□ -1.65
NIPBL-208ENST00000514335 STATHP02808 62 aa4.74□□□□□ -1.65
NIPBL-208ENST00000514335 SLPIP03973 132 aa4.74□□□□□ -1.65
NIPBL-208ENST00000514335 FAM27BQ5VT28 67 aa4.74□□□□□ -1.65
NIPBL-208ENST00000514335 TLN1Q9Y490 2541 aaKnown RBP4.74□□□□□ -1.65
NIPBL-208ENST00000514335 RELNP78509 3460 aa4.74□□□□□ -1.65
NIPBL-208ENST00000514335 LINC00208Q96KT6 92 aa4.73□□□□□ -1.65
NIPBL-208ENST00000514335 NF1P21359 2839 aa4.73□□□□□ -1.65
NIPBL-208ENST00000514335 DNHD1Q96M86 4753 aa4.73□□□□□ -1.65
NIPBL-208ENST00000514335 JMJD7-PLA2G4BH0Y9G9 81 aa4.73□□□□□ -1.65
NIPBL-208ENST00000514335 ATMQ13315 3056 aa4.73□□□□□ -1.65
NIPBL-208ENST00000514335 NDUFAF8A1L188 74 aa4.73□□□□□ -1.65
NIPBL-208ENST00000514335 NNATQ16517 81 aa4.73□□□□□ -1.65
NIPBL-208ENST00000514335 XAGE1AQ9HD64 81 aa4.73□□□□□ -1.65
NIPBL-208ENST00000514335 OTOGQ6ZRI0 2925 aa4.72□□□□□ -1.65
NIPBL-208ENST00000514335 IGLV5-45A0A087WSX0 123 aa4.72□□□□□ -1.65
NIPBL-208ENST00000514335 A0A1B0GW54 56 aa4.72□□□□□ -1.65
NIPBL-208ENST00000514335 LECT2O14960 151 aa4.72□□□□□ -1.65
NIPBL-208ENST00000514335 DHRS4-AS1Q9P1J3 65 aa4.72□□□□□ -1.65
NIPBL-208ENST00000514335 COL12A1Q99715 3063 aa4.72□□□□□ -1.65
NIPBL-208ENST00000514335 MGPP08493 103 aa4.72□□□□□ -1.65
NIPBL-208ENST00000514335 HIVEP1P15822 2718 aa4.72□□□□□ -1.65
NIPBL-208ENST00000514335 IGHV3-73A0A0B4J1V6 119 aa4.71□□□□□ -1.66
NIPBL-208ENST00000514335 LCE6AA0A183 80 aa4.71□□□□□ -1.66
NIPBL-208ENST00000514335 SPAG11BQ08648 103 aa4.71□□□□□ -1.66
NIPBL-208ENST00000514335 SPAG11AQ6PDA7 123 aa4.71□□□□□ -1.66
NIPBL-208ENST00000514335 C20orf166-AS1Q96NR2 134 aa4.71□□□□□ -1.66
NIPBL-208ENST00000514335 IGHV1-18A0A0C4DH31 117 aa4.71□□□□□ -1.66
NIPBL-208ENST00000514335 SRRM5B3KS81 715 aa4.71□□□□□ -1.66
NIPBL-208ENST00000514335 KRTAP4-16G5E9R7 235 aaPredicted RBP4.71□□□□□ -1.66
NIPBL-208ENST00000514335 M0R2N4 97 aa4.71□□□□□ -1.66
NIPBL-208ENST00000514335 IGHV1-46P01743 117 aa4.71□□□□□ -1.66
NIPBL-208ENST00000514335 LINC00308Q8TCZ7 52 aa4.71□□□□□ -1.66
NIPBL-208ENST00000514335 HIVEP3Q5T1R4 2406 aa4.71□□□□□ -1.66
NIPBL-208ENST00000514335 Q9BRP9 147 aa4.7□□□□□ -1.66
NIPBL-208ENST00000514335 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.7□□□□□ -1.66
NIPBL-208ENST00000514335 IGKV3D-11A0A0A0MRZ8 115 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms