RNA–Protein interactions for RNA: ENST00000513664.1

PDGFC-209, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-209ENST00000513664 TLX1NBP0CAT3 122 aa6.07□□□□□ -1.44
PDGFC-209ENST00000513664 ODF1Q14990 250 aa6.07□□□□□ -1.44
PDGFC-209ENST00000513664 UNQ6190/PRO20217Q6UXQ8 127 aa6.07□□□□□ -1.44
PDGFC-209ENST00000513664 SCXQ7RTU7 201 aa6.07□□□□□ -1.44
PDGFC-209ENST00000513664 COX7B2Q8TF08 81 aa6.07□□□□□ -1.44
PDGFC-209ENST00000513664 IGLV5-39A0A0G2JS06 123 aa6.06□□□□□ -1.44
PDGFC-209ENST00000513664 SPACA4Q8TDM5 124 aa6.06□□□□□ -1.44
PDGFC-209ENST00000513664 C6orf48Q9UBA6 75 aa6.06□□□□□ -1.44
PDGFC-209ENST00000513664 FAM229AH3BQW9 127 aa6.05□□□□□ -1.44
PDGFC-209ENST00000513664 DPM2O94777 84 aa6.05□□□□□ -1.44
PDGFC-209ENST00000513664 S100A6P06703 90 aa6.05□□□□□ -1.44
PDGFC-209ENST00000513664 PTTG1IPP53801 180 aa6.05□□□□□ -1.44
PDGFC-209ENST00000513664 C10orf25Q5T742 122 aa6.05□□□□□ -1.44
PDGFC-209ENST00000513664 Q8N1X5 172 aa6.05□□□□□ -1.44
PDGFC-209ENST00000513664 CIRBP-AS1Q8TBR5 109 aa6.05□□□□□ -1.44
PDGFC-209ENST00000513664 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.05□□□□□ -1.44
PDGFC-209ENST00000513664 APOBP04114 4563 aaKnown RBP6.04□□□□□ -1.44
PDGFC-209ENST00000513664 A0A096LNI7 61 aa6.04□□□□□ -1.44
PDGFC-209ENST00000513664 IGKV2-24A0A0C4DH68 120 aa6.04□□□□□ -1.44
PDGFC-209ENST00000513664 TMEM223A0PJW6 202 aa6.04□□□□□ -1.44
PDGFC-209ENST00000513664 NDUFC2-KCTD14E9PQ53 114 aa6.04□□□□□ -1.44
PDGFC-209ENST00000513664 SYS1-DBNDD2H3BUS1 97 aa6.04□□□□□ -1.44
PDGFC-209ENST00000513664 AKR1D1P51857 326 aa6.04□□□□□ -1.44
PDGFC-209ENST00000513664 RPL18AQ02543 176 aaKnown RBP6.04□□□□□ -1.44
PDGFC-209ENST00000513664 GAGE2BQ13066 116 aa6.04□□□□□ -1.44
PDGFC-209ENST00000513664 MAJINQ3KP22 176 aa6.04□□□□□ -1.44
PDGFC-209ENST00000513664 C2orf82Q6UX34 121 aa6.04□□□□□ -1.44
PDGFC-209ENST00000513664 HSPG2P98160 4391 aa6.04□□□□□ -1.44
PDGFC-209ENST00000513664 A0A087WYN8 130 aa6.03□□□□□ -1.44
PDGFC-209ENST00000513664 IGKCP01834 107 aa6.03□□□□□ -1.44
PDGFC-209ENST00000513664 CHTF8P0CG12 524 aa6.03□□□□□ -1.44
PDGFC-209ENST00000513664 HERVK_113P61574 105 aa6.03□□□□□ -1.44
PDGFC-209ENST00000513664 PET117Q6UWS5 81 aa6.03□□□□□ -1.44
PDGFC-209ENST00000513664 STPG4Q8N801 248 aa6.03□□□□□ -1.44
PDGFC-209ENST00000513664 PLAC8Q9NZF1 115 aa6.03□□□□□ -1.44
PDGFC-209ENST00000513664 KIAA1109Q2LD37 5005 aa6.03□□□□□ -1.44
PDGFC-209ENST00000513664 C20orf202A1L168 122 aa6.02□□□□□ -1.45
PDGFC-209ENST00000513664 EPM2AB3EWF7 344 aa6.02□□□□□ -1.45
PDGFC-209ENST00000513664 PANO1I0J062 215 aa6.02□□□□□ -1.45
PDGFC-209ENST00000513664 S100A2P29034 98 aa6.02□□□□□ -1.45
PDGFC-209ENST00000513664 Q6ZRP5 223 aa6.02□□□□□ -1.45
PDGFC-209ENST00000513664 DNAH8Q96JB1 4490 aa6.02□□□□□ -1.45
PDGFC-209ENST00000513664 PLA2G1BP04054 148 aaKnown RBP6.01□□□□□ -1.45
PDGFC-209ENST00000513664 HAMPP81172 84 aa6.01□□□□□ -1.45
PDGFC-209ENST00000513664 COX17Q14061 63 aa6.01□□□□□ -1.45
PDGFC-209ENST00000513664 LINC01545Q5VT33 79 aa6.01□□□□□ -1.45
PDGFC-209ENST00000513664 C7orf33Q8WU49 177 aa6.01□□□□□ -1.45
PDGFC-209ENST00000513664 LINC00587B1AMM8 73 aa6□□□□□ -1.45
PDGFC-209ENST00000513664 SMR3BP02814 79 aaPredicted RBP6□□□□□ -1.45
PDGFC-209ENST00000513664 C3orf79P0CE67 100 aa6□□□□□ -1.45
PDGFC-209ENST00000513664 KRTDAPP60985 99 aa6□□□□□ -1.45
PDGFC-209ENST00000513664 HERV-K104P63124 156 aa6□□□□□ -1.45
PDGFC-209ENST00000513664 C9orf116Q5BN46 136 aaPredicted RBP6□□□□□ -1.45
PDGFC-209ENST00000513664 LINC00528Q8N1L1 170 aa6□□□□□ -1.45
PDGFC-209ENST00000513664 PLEKHB2Q96CS7 222 aa6□□□□□ -1.45
PDGFC-209ENST00000513664 RYR1P21817 5038 aa5.99□□□□□ -1.45
PDGFC-209ENST00000513664 LEPROTO15243 131 aa5.99□□□□□ -1.45
PDGFC-209ENST00000513664 NMUP48645 174 aa5.99□□□□□ -1.45
PDGFC-209ENST00000513664 GAGE2EQ4V326 116 aa5.99□□□□□ -1.45
PDGFC-209ENST00000513664 Q5VSD8 79 aa5.99□□□□□ -1.45
PDGFC-209ENST00000513664 HIST3H2BBQ8N257 126 aa5.99□□□□□ -1.45
PDGFC-209ENST00000513664 ZNF625Q96I27 306 aaPredicted RBP5.99□□□□□ -1.45
PDGFC-209ENST00000513664 PMCHL2Q9BQD1 86 aa5.99□□□□□ -1.45
PDGFC-209ENST00000513664 GAGE2DQ9UEU5 116 aa5.99□□□□□ -1.45
PDGFC-209ENST00000513664 MYMXA0A1B0GTQ4 84 aa5.98□□□□□ -1.45
PDGFC-209ENST00000513664 KRTAP17-1Q9BYP8 105 aa5.98□□□□□ -1.45
PDGFC-209ENST00000513664 ERG28Q9UKR5 140 aa5.98□□□□□ -1.45
PDGFC-209ENST00000513664 HERC2O95714 4834 aa5.97□□□□□ -1.45
PDGFC-209ENST00000513664 E9PLD3 99 aa5.97□□□□□ -1.45
PDGFC-209ENST00000513664 J3QQQ9 107 aa5.97□□□□□ -1.45
PDGFC-209ENST00000513664 LGALS3P17931 250 aaKnown RBP5.97□□□□□ -1.45
PDGFC-209ENST00000513664 HIST1H2BLQ99880 126 aa5.97□□□□□ -1.45
PDGFC-209ENST00000513664 NDUFA12Q9UI09 145 aa5.97□□□□□ -1.45
PDGFC-209ENST00000513664 SRRM2Q9UQ35 2752 aaKnown RBP5.96□□□□□ -1.45
PDGFC-209ENST00000513664 A0A1W2PNN7 141 aa5.96□□□□□ -1.46
PDGFC-209ENST00000513664 C5orf52A6NGY3 159 aa5.96□□□□□ -1.46
PDGFC-209ENST00000513664 PFN2P35080 140 aa5.96□□□□□ -1.46
PDGFC-209ENST00000513664 RPL37AP61513 92 aaKnown RBP5.96□□□□□ -1.46
PDGFC-209ENST00000513664 SNRPEP62304 92 aaKnown RBP5.96□□□□□ -1.46
PDGFC-209ENST00000513664 C9orf129Q5T035 196 aaKnown RBP5.95□□□□□ -1.46
PDGFC-209ENST00000513664 XAGE1AQ9HD64 81 aa5.95□□□□□ -1.46
PDGFC-209ENST00000513664 PLA2G2DQ9UNK4 145 aa5.95□□□□□ -1.46
PDGFC-209ENST00000513664 LINC00158P58513 81 aa5.94□□□□□ -1.46
PDGFC-209ENST00000513664 LBHQ53QV2 105 aaPredicted RBP5.94□□□□□ -1.46
PDGFC-209ENST00000513664 MEIG1Q5JSS6 88 aa5.94□□□□□ -1.46
PDGFC-209ENST00000513664 FAM19A5Q7Z5A7 132 aaPredicted RBP5.94□□□□□ -1.46
PDGFC-209ENST00000513664 TP73-AS1Q9UF72 201 aa5.94□□□□□ -1.46
PDGFC-209ENST00000513664 TMA7Q9Y2S6 64 aaKnown RBP5.94□□□□□ -1.46
PDGFC-209ENST00000513664 FAM168BA1KXE4 195 aa5.93□□□□□ -1.46
PDGFC-209ENST00000513664 M0QXV9 152 aa5.93□□□□□ -1.46
PDGFC-209ENST00000513664 RPL24P83731 157 aaKnown RBP5.93□□□□□ -1.46
PDGFC-209ENST00000513664 SND1-IT1Q9HBX3 110 aa5.93□□□□□ -1.46
PDGFC-209ENST00000513664 VPS13BQ7Z7G8 4022 aa5.93□□□□□ -1.46
PDGFC-209ENST00000513664 TSPEAR-AS2P59090 65 aa5.92□□□□□ -1.46
PDGFC-209ENST00000513664 IGLV5-37A0A075B6J1 123 aa5.91□□□□□ -1.46
PDGFC-209ENST00000513664 HSBP1L1C9JCN9 74 aa5.91□□□□□ -1.46
PDGFC-209ENST00000513664 SMIM13P0DJ93 91 aa5.91□□□□□ -1.46
PDGFC-209ENST00000513664 INAFM2P0DMQ5 153 aa5.91□□□□□ -1.46
PDGFC-209ENST00000513664 UBE2BP63146 152 aa5.91□□□□□ -1.46
PDGFC-209ENST00000513664 PHF5AQ7RTV0 110 aaKnown RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms