RNA–Protein interactions for RNA: ENST00000512526.1

SGCA-208, Transcript of sarcoglycan alpha, humanhuman

TSL 3

Gene SGCA, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-208ENST00000512526 C2orf82Q6UX34 121 aa10.05□□□□□ -0.8
SGCA-208ENST00000512526 CIRBP-AS1Q8TBR5 109 aa10.05□□□□□ -0.8
SGCA-208ENST00000512526 H3BRM9 83 aa10.04□□□□□ -0.8
SGCA-208ENST00000512526 CHTF8P0CG12 524 aa10.04□□□□□ -0.8
SGCA-208ENST00000512526 ODF1Q14990 250 aa10.04□□□□□ -0.8
SGCA-208ENST00000512526 TOMM7Q9P0U1 55 aa10.04□□□□□ -0.8
SGCA-208ENST00000512526 C6orf48Q9UBA6 75 aa10.04□□□□□ -0.8
SGCA-208ENST00000512526 IGLV5-39A0A0G2JS06 123 aa10.03□□□□□ -0.8
SGCA-208ENST00000512526 F8VRH5 84 aa10.03□□□□□ -0.8
SGCA-208ENST00000512526 PRSS2P07478 247 aa10.03□□□□□ -0.8
SGCA-208ENST00000512526 Q8N1X5 172 aa10.03□□□□□ -0.8
SGCA-208ENST00000512526 SPACA4Q8TDM5 124 aa10.03□□□□□ -0.8
SGCA-208ENST00000512526 A0A096LNI7 61 aa10.02□□□□□ -0.81
SGCA-208ENST00000512526 LOC107984640A0A0U1RRK4 108 aa10.02□□□□□ -0.81
SGCA-208ENST00000512526 SMR3BP02814 79 aaPredicted RBP10.02□□□□□ -0.81
SGCA-208ENST00000512526 PKIGQ9Y2B9 76 aa10.02□□□□□ -0.81
SGCA-208ENST00000512526 TRBV30A0A0K0K1B3 111 aa10.01□□□□□ -0.81
SGCA-208ENST00000512526 TLX1NBP0CAT3 122 aa10.01□□□□□ -0.81
SGCA-208ENST00000512526 CKS1BP61024 79 aa10.01□□□□□ -0.81
SGCA-208ENST00000512526 TMEM170BQ5T4T1 132 aa10.01□□□□□ -0.81
SGCA-208ENST00000512526 COX7B2Q8TF08 81 aa10.01□□□□□ -0.81
SGCA-208ENST00000512526 A0A087WYN8 130 aa10□□□□□ -0.81
SGCA-208ENST00000512526 IGKV2-24A0A0C4DH68 120 aa10□□□□□ -0.81
SGCA-208ENST00000512526 PTTG1IPP53801 180 aa10□□□□□ -0.81
SGCA-208ENST00000512526 KRTAP4-5Q9BYR2 181 aa10□□□□□ -0.81
SGCA-208ENST00000512526 LINC00474Q9P2X8 69 aa10□□□□□ -0.81
SGCA-208ENST00000512526 H0Y8G0 127 aa9.99□□□□□ -0.81
SGCA-208ENST00000512526 CXCL5P42830 114 aa9.99□□□□□ -0.81
SGCA-208ENST00000512526 GAGE2BQ13066 116 aa9.99□□□□□ -0.81
SGCA-208ENST00000512526 MAJINQ3KP22 176 aa9.99□□□□□ -0.81
SGCA-208ENST00000512526 DPH3Q96FX2 82 aa9.99□□□□□ -0.81
SGCA-208ENST00000512526 MAP1LC3CQ9BXW4 147 aa9.99□□□□□ -0.81
SGCA-208ENST00000512526 PLAC8Q9NZF1 115 aa9.99□□□□□ -0.81
SGCA-208ENST00000512526 TMEM223A0PJW6 202 aa9.98□□□□□ -0.81
SGCA-208ENST00000512526 C9orf116Q5BN46 136 aaPredicted RBP9.98□□□□□ -0.81
SGCA-208ENST00000512526 Q6ZRP5 223 aa9.98□□□□□ -0.81
SGCA-208ENST00000512526 EPM2AB3EWF7 344 aa9.97□□□□□ -0.81
SGCA-208ENST00000512526 SYS1-DBNDD2H3BUS1 97 aa9.96□□□□□ -0.82
SGCA-208ENST00000512526 STPG4Q8N801 248 aa9.96□□□□□ -0.82
SGCA-208ENST00000512526 PMCHL2Q9BQD1 86 aa9.96□□□□□ -0.82
SGCA-208ENST00000512526 VPS13BQ7Z7G8 4022 aa9.96□□□□□ -0.82
SGCA-208ENST00000512526 NDUFC2-KCTD14E9PQ53 114 aa9.95□□□□□ -0.82
SGCA-208ENST00000512526 PLNP26678 52 aa9.95□□□□□ -0.82
SGCA-208ENST00000512526 RPL18AQ02543 176 aaKnown RBP9.95□□□□□ -0.82
SGCA-208ENST00000512526 A0A1W2PNN7 141 aa9.94□□□□□ -0.82
SGCA-208ENST00000512526 DPM2O94777 84 aa9.94□□□□□ -0.82
SGCA-208ENST00000512526 FAM229AH3BQW9 127 aa9.93□□□□□ -0.82
SGCA-208ENST00000512526 IGKCP01834 107 aa9.93□□□□□ -0.82
SGCA-208ENST00000512526 C3orf79P0CE67 100 aa9.93□□□□□ -0.82
SGCA-208ENST00000512526 PET117Q6UWS5 81 aa9.93□□□□□ -0.82
SGCA-208ENST00000512526 LINC00528Q8N1L1 170 aa9.93□□□□□ -0.82
SGCA-208ENST00000512526 GAGE2EQ4V326 116 aa9.92□□□□□ -0.82
SGCA-208ENST00000512526 Q5VSD8 79 aa9.92□□□□□ -0.82
SGCA-208ENST00000512526 LINC01545Q5VT33 79 aa9.92□□□□□ -0.82
SGCA-208ENST00000512526 ZNF625Q96I27 306 aaPredicted RBP9.92□□□□□ -0.82
SGCA-208ENST00000512526 GAGE2DQ9UEU5 116 aa9.92□□□□□ -0.82
SGCA-208ENST00000512526 HIST3H2BBQ8N257 126 aa9.91□□□□□ -0.82
SGCA-208ENST00000512526 C9orf129Q5T035 196 aaKnown RBP9.9□□□□□ -0.82
SGCA-208ENST00000512526 KRTAP10-4P60372 401 aaPredicted RBP9.89□□□□□ -0.83
SGCA-208ENST00000512526 SFTA2Q6UW10 78 aa9.89□□□□□ -0.83
SGCA-208ENST00000512526 KRTDAPP60985 99 aa9.88□□□□□ -0.83
SGCA-208ENST00000512526 KRTAP7-1Q8IUC3 87 aa9.88□□□□□ -0.83
SGCA-208ENST00000512526 HIST1H2BLQ99880 126 aa9.88□□□□□ -0.83
SGCA-208ENST00000512526 FAM168BA1KXE4 195 aa9.87□□□□□ -0.83
SGCA-208ENST00000512526 LEPROTO15243 131 aa9.87□□□□□ -0.83
SGCA-208ENST00000512526 S100A6P06703 90 aa9.87□□□□□ -0.83
SGCA-208ENST00000512526 PLA2G1BP04054 148 aaKnown RBP9.86□□□□□ -0.83
SGCA-208ENST00000512526 TSPEAR-AS2P59090 65 aa9.86□□□□□ -0.83
SGCA-208ENST00000512526 COX17Q14061 63 aa9.86□□□□□ -0.83
SGCA-208ENST00000512526 HERC1Q15751 4861 aa9.86□□□□□ -0.83
SGCA-208ENST00000512526 PLEKHB2Q96CS7 222 aa9.86□□□□□ -0.83
SGCA-208ENST00000512526 XAGE1AQ9HD64 81 aa9.86□□□□□ -0.83
SGCA-208ENST00000512526 ERG28Q9UKR5 140 aa9.86□□□□□ -0.83
SGCA-208ENST00000512526 C5orf52A6NGY3 159 aa9.85□□□□□ -0.83
SGCA-208ENST00000512526 HERVK_113P61574 105 aa9.85□□□□□ -0.83
SGCA-208ENST00000512526 SNRPEP62304 92 aaKnown RBP9.85□□□□□ -0.83
SGCA-208ENST00000512526 E9PLD3 99 aa9.84□□□□□ -0.83
SGCA-208ENST00000512526 J3QQQ9 107 aa9.84□□□□□ -0.83
SGCA-208ENST00000512526 S100A2P29034 98 aa9.84□□□□□ -0.83
SGCA-208ENST00000512526 PFN2P35080 140 aa9.84□□□□□ -0.83
SGCA-208ENST00000512526 NDUFA12Q9UI09 145 aa9.84□□□□□ -0.83
SGCA-208ENST00000512526 RPL37AP61513 92 aaKnown RBP9.83□□□□□ -0.84
SGCA-208ENST00000512526 HERV-K104P63124 156 aa9.83□□□□□ -0.84
SGCA-208ENST00000512526 C7orf33Q8WU49 177 aa9.83□□□□□ -0.84
SGCA-208ENST00000512526 MYMXA0A1B0GTQ4 84 aa9.82□□□□□ -0.84
SGCA-208ENST00000512526 SERTAD4-AS1Q5TG53 156 aa9.82□□□□□ -0.84
SGCA-208ENST00000512526 PHF5AQ7RTV0 110 aaKnown RBP9.82□□□□□ -0.84
SGCA-208ENST00000512526 FAM19A5Q7Z5A7 132 aaPredicted RBP9.82□□□□□ -0.84
SGCA-208ENST00000512526 SND1-IT1Q9HBX3 110 aa9.81□□□□□ -0.84
SGCA-208ENST00000512526 PLA2G2DQ9UNK4 145 aa9.81□□□□□ -0.84
SGCA-208ENST00000512526 SRRM2Q9UQ35 2752 aaKnown RBP9.8□□□□□ -0.84
SGCA-208ENST00000512526 C20orf202A1L168 122 aa9.8□□□□□ -0.84
SGCA-208ENST00000512526 NMUP48645 174 aa9.8□□□□□ -0.84
SGCA-208ENST00000512526 LINC00158P58513 81 aa9.79□□□□□ -0.84
SGCA-208ENST00000512526 C22orf24Q9Y442 160 aa9.79□□□□□ -0.84
SGCA-208ENST00000512526 LINC00587B1AMM8 73 aa9.78□□□□□ -0.84
SGCA-208ENST00000512526 SMIM13P0DJ93 91 aa9.78□□□□□ -0.84
SGCA-208ENST00000512526 INAFM2P0DMQ5 153 aa9.78□□□□□ -0.84
SGCA-208ENST00000512526 LGALS3P17931 250 aaKnown RBP9.78□□□□□ -0.84
SGCA-208ENST00000512526 KRTAP11-1Q8IUC1 163 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms