RNA–Protein interactions for RNA: ENST00000512143.1

PDGFRA-209, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 3

Gene PDGFRA, Length 580 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-209ENST00000512143 NDUFA12Q9UI09 145 aa6.58□□□□□ -1.36
PDGFRA-209ENST00000512143 ZNF815PA8K554 130 aa6.57□□□□□ -1.36
PDGFRA-209ENST00000512143 SPAG11BQ08648 103 aa6.57□□□□□ -1.36
PDGFRA-209ENST00000512143 CFAP161Q6P656 301 aa6.57□□□□□ -1.36
PDGFRA-209ENST00000512143 NTN5Q8WTR8 489 aaPredicted RBP6.57□□□□□ -1.36
PDGFRA-209ENST00000512143 TOMM7Q9P0U1 55 aa6.57□□□□□ -1.36
PDGFRA-209ENST00000512143 KMT2CQ8NEZ4 4911 aaKnown RBP6.57□□□□□ -1.36
PDGFRA-209ENST00000512143 A0A0J9YXY3 114 aa6.56□□□□□ -1.36
PDGFRA-209ENST00000512143 LRCOL1A6NCL2 159 aa6.56□□□□□ -1.36
PDGFRA-209ENST00000512143 USP17L23D6RBM5 183 aa6.56□□□□□ -1.36
PDGFRA-209ENST00000512143 C6orf226Q5I0X4 101 aa6.56□□□□□ -1.36
PDGFRA-209ENST00000512143 C6orf223Q8N319 242 aa6.56□□□□□ -1.36
PDGFRA-209ENST00000512143 HIGD1BQ9P298 99 aa6.56□□□□□ -1.36
PDGFRA-209ENST00000512143 RYR2Q92736 4967 aa6.55□□□□□ -1.36
PDGFRA-209ENST00000512143 LCE6AA0A183 80 aa6.55□□□□□ -1.36
PDGFRA-209ENST00000512143 PRSS2P07478 247 aa6.55□□□□□ -1.36
PDGFRA-209ENST00000512143 DDTP30046 118 aa6.55□□□□□ -1.36
PDGFRA-209ENST00000512143 CXCL5P42830 114 aa6.55□□□□□ -1.36
PDGFRA-209ENST00000512143 HERV-K104P63124 156 aa6.55□□□□□ -1.36
PDGFRA-209ENST00000512143 WFDC2Q14508 124 aa6.55□□□□□ -1.36
PDGFRA-209ENST00000512143 SFTA2Q6UW10 78 aa6.55□□□□□ -1.36
PDGFRA-209ENST00000512143 C2orf82Q6UX34 121 aa6.55□□□□□ -1.36
PDGFRA-209ENST00000512143 LINC00526Q96FQ7 95 aa6.55□□□□□ -1.36
PDGFRA-209ENST00000512143 C2orf48Q96LS8 159 aa6.55□□□□□ -1.36
PDGFRA-209ENST00000512143 FAT2Q9NYQ8 4349 aa6.54□□□□□ -1.36
PDGFRA-209ENST00000512143 FRAS1Q86XX4 4008 aa6.54□□□□□ -1.36
PDGFRA-209ENST00000512143 F8WDY8 70 aa6.54□□□□□ -1.36
PDGFRA-209ENST00000512143 SLPIP03973 132 aa6.54□□□□□ -1.36
PDGFRA-209ENST00000512143 HIGD2BQ4VC39 106 aa6.54□□□□□ -1.36
PDGFRA-209ENST00000512143 C10orf25Q5T742 122 aa6.54□□□□□ -1.36
PDGFRA-209ENST00000512143 LITAFQ99732 161 aa6.54□□□□□ -1.36
PDGFRA-209ENST00000512143 DNAH11Q96DT5 4516 aa6.54□□□□□ -1.36
PDGFRA-209ENST00000512143 ZNF561-AS1K7EIQ3 104 aa6.53□□□□□ -1.36
PDGFRA-209ENST00000512143 TIMM17BO60830 172 aa6.53□□□□□ -1.36
PDGFRA-209ENST00000512143 CKS1BP61024 79 aa6.53□□□□□ -1.36
PDGFRA-209ENST00000512143 C1orf134Q5TEV5 83 aa6.53□□□□□ -1.36
PDGFRA-209ENST00000512143 UNQ6190/PRO20217Q6UXQ8 127 aa6.53□□□□□ -1.36
PDGFRA-209ENST00000512143 LECT2O14960 151 aa6.52□□□□□ -1.37
PDGFRA-209ENST00000512143 PSCAO43653 123 aa6.52□□□□□ -1.37
PDGFRA-209ENST00000512143 HNRNPA3P51991 378 aaKnown RBP6.52□□□□□ -1.37
PDGFRA-209ENST00000512143 ADAMTSL4-AS1Q5T5F5 129 aa6.52□□□□□ -1.37
PDGFRA-209ENST00000512143 SCGB1D4Q6XE38 83 aa6.52□□□□□ -1.37
PDGFRA-209ENST00000512143 SPANXB1Q9NS25 103 aaPredicted RBP6.52□□□□□ -1.37
PDGFRA-209ENST00000512143 Q6ZRU5 148 aa6.51□□□□□ -1.37
PDGFRA-209ENST00000512143 CAMK2N2Q96S95 79 aa6.51□□□□□ -1.37
PDGFRA-209ENST00000512143 C6orf48Q9UBA6 75 aa6.51□□□□□ -1.37
PDGFRA-209ENST00000512143 A0A087WTM6 91 aa6.5□□□□□ -1.37
PDGFRA-209ENST00000512143 TRBV30A0A0K0K1B3 111 aa6.5□□□□□ -1.37
PDGFRA-209ENST00000512143 PCP4L1A6NKN8 68 aa6.5□□□□□ -1.37
PDGFRA-209ENST00000512143 LINC00587B1AMM8 73 aa6.5□□□□□ -1.37
PDGFRA-209ENST00000512143 RTL8CO15255 209 aa6.5□□□□□ -1.37
PDGFRA-209ENST00000512143 SMIM13P0DJ93 91 aa6.5□□□□□ -1.37
PDGFRA-209ENST00000512143 CNBPP62633 177 aaKnown RBP6.5□□□□□ -1.37
PDGFRA-209ENST00000512143 CTAG1AP78358 180 aa6.5□□□□□ -1.37
PDGFRA-209ENST00000512143 SYCNQ0VAF6 134 aa6.5□□□□□ -1.37
PDGFRA-209ENST00000512143 TAL2Q16559 108 aa6.5□□□□□ -1.37
PDGFRA-209ENST00000512143 RNF151Q2KHN1 245 aa6.5□□□□□ -1.37
PDGFRA-209ENST00000512143 C14orf177Q52M58 125 aa6.5□□□□□ -1.37
PDGFRA-209ENST00000512143 SPANXDQ9BXN6 97 aa6.5□□□□□ -1.37
PDGFRA-209ENST00000512143 SPANXCQ9NY87 97 aa6.5□□□□□ -1.37
PDGFRA-209ENST00000512143 ERG28Q9UKR5 140 aa6.5□□□□□ -1.37
PDGFRA-209ENST00000512143 TMEM238C9JI98 176 aa6.49□□□□□ -1.37
PDGFRA-209ENST00000512143 PTTG1IPP53801 180 aa6.49□□□□□ -1.37
PDGFRA-209ENST00000512143 CIRBPQ14011 172 aaKnown RBP6.49□□□□□ -1.37
PDGFRA-209ENST00000512143 COX17Q14061 63 aa6.49□□□□□ -1.37
PDGFRA-209ENST00000512143 C9orf116Q5BN46 136 aaPredicted RBP6.49□□□□□ -1.37
PDGFRA-209ENST00000512143 Q6ZVH6 145 aa6.49□□□□□ -1.37
PDGFRA-209ENST00000512143 HSD52Q0P140 79 aa6.48□□□□□ -1.37
PDGFRA-209ENST00000512143 MEIG1Q5JSS6 88 aa6.48□□□□□ -1.37
PDGFRA-209ENST00000512143 PPDPFQ9H3Y8 114 aa6.48□□□□□ -1.37
PDGFRA-209ENST00000512143 HECTD4Q9Y4D8 3996 aa6.48□□□□□ -1.37
PDGFRA-209ENST00000512143 RYR3Q15413 4870 aa6.47□□□□□ -1.37
PDGFRA-209ENST00000512143 DNAH5Q8TE73 4624 aa6.47□□□□□ -1.37
PDGFRA-209ENST00000512143 EIF4EBP3O60516 100 aaPredicted RBP6.47□□□□□ -1.37
PDGFRA-209ENST00000512143 TLX1NBP0CAT3 122 aa6.47□□□□□ -1.37
PDGFRA-209ENST00000512143 LINC00158P58513 81 aa6.47□□□□□ -1.37
PDGFRA-209ENST00000512143 LCE2AQ5TA79 106 aaPredicted RBP6.47□□□□□ -1.37
PDGFRA-209ENST00000512143 Q8N814 137 aa6.47□□□□□ -1.37
PDGFRA-209ENST00000512143 SVIPQ8NHG7 77 aa6.47□□□□□ -1.37
PDGFRA-209ENST00000512143 CARD19Q96LW7 228 aa6.47□□□□□ -1.37
PDGFRA-209ENST00000512143 PKD1P98161 4303 aa6.46□□□□□ -1.37
PDGFRA-209ENST00000512143 LOC107984156A0A0G2JMH3 177 aa6.46□□□□□ -1.38
PDGFRA-209ENST00000512143 A0A0U1RRA0 63 aa6.46□□□□□ -1.38
PDGFRA-209ENST00000512143 IFITM1P13164 125 aa6.46□□□□□ -1.38
PDGFRA-209ENST00000512143 PFN2P35080 140 aa6.46□□□□□ -1.38
PDGFRA-209ENST00000512143 TNP2Q05952 138 aa6.46□□□□□ -1.38
PDGFRA-209ENST00000512143 SRSF9Q13242 221 aaKnown RBP eCLIP6.46□□□□□ -1.38
PDGFRA-209ENST00000512143 BVES-AS1Q5T3Y7 98 aa6.46□□□□□ -1.38
PDGFRA-209ENST00000512143 SOSTDC1Q6X4U4 206 aa6.46□□□□□ -1.38
PDGFRA-209ENST00000512143 ARL17AQ8IVW1 177 aa6.46□□□□□ -1.38
PDGFRA-209ENST00000512143 CEND1Q8N111 149 aa6.46□□□□□ -1.38
PDGFRA-209ENST00000512143 MIR7-3HGQ8N6C7 128 aa6.46□□□□□ -1.38
PDGFRA-209ENST00000512143 DAND5Q8N907 189 aa6.46□□□□□ -1.38
PDGFRA-209ENST00000512143 HIST1H4GQ99525 98 aa6.46□□□□□ -1.38
PDGFRA-209ENST00000512143 NDUFC2-KCTD14E9PQ53 114 aa6.45□□□□□ -1.38
PDGFRA-209ENST00000512143 MUSTN1Q8IVN3 82 aa6.45□□□□□ -1.38
PDGFRA-209ENST00000512143 LINC00308Q8TCZ7 52 aa6.45□□□□□ -1.38
PDGFRA-209ENST00000512143 C9orf163Q8N9P6 203 aa6.44□□□□□ -1.38
PDGFRA-209ENST00000512143 SND1-IT1Q9HBX3 110 aa6.44□□□□□ -1.38
PDGFRA-209ENST00000512143 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms