RNA–Protein interactions for RNA: ENST00000511892.5

RNF4-217, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-217ENST00000511892 NMUP48645 174 aa3.83□□□□□ -1.8
RNF4-217ENST00000511892 RPL39P62891 51 aaKnown RBP3.83□□□□□ -1.8
RNF4-217ENST00000511892 SEC11AP67812 179 aa3.83□□□□□ -1.8
RNF4-217ENST00000511892 TAL2Q16559 108 aa3.83□□□□□ -1.8
RNF4-217ENST00000511892 Q5VSD8 79 aa3.83□□□□□ -1.8
RNF4-217ENST00000511892 AMELXQ99217 191 aa3.83□□□□□ -1.8
RNF4-217ENST00000511892 CHCHD7Q9BUK0 85 aa3.83□□□□□ -1.8
RNF4-217ENST00000511892 KLK12Q9UKR0 248 aa3.83□□□□□ -1.8
RNF4-217ENST00000511892 TRBV6-8A0A0A6YYG3 113 aa3.82□□□□□ -1.8
RNF4-217ENST00000511892 ZNF25P17030 456 aaPredicted RBP3.82□□□□□ -1.8
RNF4-217ENST00000511892 BVES-AS1Q5T3Y7 98 aa3.82□□□□□ -1.8
RNF4-217ENST00000511892 ENHOQ6UWT2 76 aa3.82□□□□□ -1.8
RNF4-217ENST00000511892 NTM-AS1Q6ZSK4 140 aa3.82□□□□□ -1.8
RNF4-217ENST00000511892 C2orf91Q6ZV80 131 aa3.82□□□□□ -1.8
RNF4-217ENST00000511892 FAM19A3Q7Z5A8 133 aa3.82□□□□□ -1.8
RNF4-217ENST00000511892 UBE2WQ96B02 151 aa3.82□□□□□ -1.8
RNF4-217ENST00000511892 PLEKHB2Q96CS7 222 aa3.82□□□□□ -1.8
RNF4-217ENST00000511892 UBE2D4Q9Y2X8 147 aa3.82□□□□□ -1.8
RNF4-217ENST00000511892 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.81□□□□□ -1.8
RNF4-217ENST00000511892 TRBV25-1A0A075B6N4 114 aa3.81□□□□□ -1.8
RNF4-217ENST00000511892 IGKV2D-24A0A075B6R9 120 aa3.81□□□□□ -1.8
RNF4-217ENST00000511892 MYMXA0A1B0GTQ4 84 aa3.81□□□□□ -1.8
RNF4-217ENST00000511892 TINCRA0A1B0GVN0 87 aa3.81□□□□□ -1.8
RNF4-217ENST00000511892 A6NDN8 102 aa3.81□□□□□ -1.8
RNF4-217ENST00000511892 TMEM262E9PQX1 116 aa3.81□□□□□ -1.8
RNF4-217ENST00000511892 INAFM2P0DMQ5 153 aa3.81□□□□□ -1.8
RNF4-217ENST00000511892 HINT1P49773 126 aaPredicted RBP3.81□□□□□ -1.8
RNF4-217ENST00000511892 LINC01620Q4KN68 170 aa3.81□□□□□ -1.8
RNF4-217ENST00000511892 MPV17L2Q567V2 206 aa3.81□□□□□ -1.8
RNF4-217ENST00000511892 DGAT2L7PQ6IED9 249 aa3.81□□□□□ -1.8
RNF4-217ENST00000511892 Q6ZSA8 131 aa3.81□□□□□ -1.8
RNF4-217ENST00000511892 PCP2Q8IVA1 136 aa3.81□□□□□ -1.8
RNF4-217ENST00000511892 ORAOV1Q8WV07 137 aa3.81□□□□□ -1.8
RNF4-217ENST00000511892 RMI2Q96E14 147 aa3.81□□□□□ -1.8
RNF4-217ENST00000511892 TMEM243Q9BU79 118 aa3.81□□□□□ -1.8
RNF4-217ENST00000511892 CHAC1Q9BUX1 264 aa3.81□□□□□ -1.8
RNF4-217ENST00000511892 COX11Q9Y6N1 276 aa3.81□□□□□ -1.8
RNF4-217ENST00000511892 IGKV2D-26A0A0A0MRZ7 120 aa3.8□□□□□ -1.8
RNF4-217ENST00000511892 TMEM223A0PJW6 202 aa3.8□□□□□ -1.8
RNF4-217ENST00000511892 H3BRM9 83 aa3.8□□□□□ -1.8
RNF4-217ENST00000511892 UBE2L6O14933 153 aa3.8□□□□□ -1.8
RNF4-217ENST00000511892 LEPROTO15243 131 aa3.8□□□□□ -1.8
RNF4-217ENST00000511892 ZNF22P17026 224 aaPredicted RBP3.8□□□□□ -1.8
RNF4-217ENST00000511892 HERVK_113P63121 156 aa3.8□□□□□ -1.8
RNF4-217ENST00000511892 GAGE6Q13070 117 aa3.8□□□□□ -1.8
RNF4-217ENST00000511892 BATFQ16520 125 aa3.8□□□□□ -1.8
RNF4-217ENST00000511892 TMEM170BQ5T4T1 132 aa3.8□□□□□ -1.8
RNF4-217ENST00000511892 OR5A1Q8NGJ0 315 aa3.8□□□□□ -1.8
RNF4-217ENST00000511892 TMEM101Q96IK0 257 aa3.8□□□□□ -1.8
RNF4-217ENST00000511892 CHCHD5Q9BSY4 110 aa3.8□□□□□ -1.8
RNF4-217ENST00000511892 TNXBP22105 4242 aa3.79□□□□□ -1.8
RNF4-217ENST00000511892 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.79□□□□□ -1.8
RNF4-217ENST00000511892 IGLV5-45A0A087WSX0 123 aa3.79□□□□□ -1.8
RNF4-217ENST00000511892 A0A1B0GV90 55 aa3.79□□□□□ -1.8
RNF4-217ENST00000511892 IGKV2-29A2NJV5 120 aaPredicted RBP3.79□□□□□ -1.8
RNF4-217ENST00000511892 ZNF815PA8K554 130 aa3.79□□□□□ -1.8
RNF4-217ENST00000511892 ANGP03950 147 aaKnown RBP3.79□□□□□ -1.8
RNF4-217ENST00000511892 LGALS3P17931 250 aaKnown RBP3.79□□□□□ -1.8
RNF4-217ENST00000511892 UBE2D1P51668 147 aa3.79□□□□□ -1.8
RNF4-217ENST00000511892 RBX1P62877 108 aa3.79□□□□□ -1.8
RNF4-217ENST00000511892 AMMECR1LQ6DCA0 310 aa3.79□□□□□ -1.8
RNF4-217ENST00000511892 KRTAP26-1Q6PEX3 210 aa3.79□□□□□ -1.8
RNF4-217ENST00000511892 FAM104AQ969W3 186 aa3.79□□□□□ -1.8
RNF4-217ENST00000511892 C1orf43Q9BWL3 253 aa3.79□□□□□ -1.8
RNF4-217ENST00000511892 GEMIN7Q9H840 131 aaKnown RBP3.79□□□□□ -1.8
RNF4-217ENST00000511892 SPANXB1Q9NS25 103 aaPredicted RBP3.79□□□□□ -1.8
RNF4-217ENST00000511892 PRR34Q9NV39 138 aa3.79□□□□□ -1.8
RNF4-217ENST00000511892 IGHV1-58A0A0C4DH39 117 aa3.78□□□□□ -1.8
RNF4-217ENST00000511892 A0A0J9YXV3 536 aa3.78□□□□□ -1.8
RNF4-217ENST00000511892 J3QQQ9 107 aa3.78□□□□□ -1.8
RNF4-217ENST00000511892 CCL25O15444 150 aa3.78□□□□□ -1.8
RNF4-217ENST00000511892 CRPP02741 224 aa3.78□□□□□ -1.8
RNF4-217ENST00000511892 MIAQ16674 131 aa3.78□□□□□ -1.8
RNF4-217ENST00000511892 CLPSL2Q6UWE3 100 aa3.78□□□□□ -1.8
RNF4-217ENST00000511892 Q6ZUT4 128 aa3.78□□□□□ -1.8
RNF4-217ENST00000511892 SCXQ7RTU7 201 aa3.78□□□□□ -1.8
RNF4-217ENST00000511892 LINC00269Q8N2A0 174 aa3.78□□□□□ -1.8
RNF4-217ENST00000511892 DEFB104AQ8WTQ1 72 aa3.78□□□□□ -1.8
RNF4-217ENST00000511892 OPRPNQ99935 248 aaPredicted RBP3.78□□□□□ -1.8
RNF4-217ENST00000511892 CDC42SE2Q9NRR3 84 aa3.78□□□□□ -1.8
RNF4-217ENST00000511892 TP73-AS1Q9UF72 201 aa3.78□□□□□ -1.8
RNF4-217ENST00000511892 IGLV4-60A0A075B6I1 120 aa3.77□□□□□ -1.81
RNF4-217ENST00000511892 A0A1B0GUV1 79 aa3.77□□□□□ -1.81
RNF4-217ENST00000511892 USP17L23D6RBM5 183 aa3.77□□□□□ -1.81
RNF4-217ENST00000511892 KRTAP10-4P60372 401 aaPredicted RBP3.77□□□□□ -1.81
RNF4-217ENST00000511892 SCGB1D4Q6XE38 83 aa3.77□□□□□ -1.81
RNF4-217ENST00000511892 Q6ZVH6 145 aa3.77□□□□□ -1.81
RNF4-217ENST00000511892 CEND1Q8N111 149 aa3.77□□□□□ -1.81
RNF4-217ENST00000511892 LINC00469Q8N7U9 141 aa3.77□□□□□ -1.81
RNF4-217ENST00000511892 HIST1H4GQ99525 98 aa3.77□□□□□ -1.81
RNF4-217ENST00000511892 IGLV10-54A0A075B6I4 117 aa3.76□□□□□ -1.81
RNF4-217ENST00000511892 IGLV5-39A0A0G2JS06 123 aa3.76□□□□□ -1.81
RNF4-217ENST00000511892 TMEM238C9JI98 176 aa3.76□□□□□ -1.81
RNF4-217ENST00000511892 TAX1BP3O14907 124 aa3.76□□□□□ -1.81
RNF4-217ENST00000511892 TIMM17BO60830 172 aa3.76□□□□□ -1.81
RNF4-217ENST00000511892 SMIM13P0DJ93 91 aa3.76□□□□□ -1.81
RNF4-217ENST00000511892 PTTG1IPP53801 180 aa3.76□□□□□ -1.81
RNF4-217ENST00000511892 REG3AQ06141 175 aa3.76□□□□□ -1.81
RNF4-217ENST00000511892 C14orf177Q52M58 125 aa3.76□□□□□ -1.81
RNF4-217ENST00000511892 SFTA2Q6UW10 78 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms