RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 SCXQ7RTU7 201 aa8.24□□□□□ -1.09
COL6A6-203ENST00000511332 RYR1P21817 5038 aa8.23□□□□□ -1.09
COL6A6-203ENST00000511332 HAMPP81172 84 aa8.23□□□□□ -1.09
COL6A6-203ENST00000511332 SPACA4Q8TDM5 124 aa8.23□□□□□ -1.09
COL6A6-203ENST00000511332 COX7B2Q8TF08 81 aa8.23□□□□□ -1.09
COL6A6-203ENST00000511332 MAP1LC3CQ9BXW4 147 aa8.23□□□□□ -1.09
COL6A6-203ENST00000511332 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.23□□□□□ -1.09
COL6A6-203ENST00000511332 A0A096LNI7 61 aa8.22□□□□□ -1.09
COL6A6-203ENST00000511332 IGKV2-24A0A0C4DH68 120 aa8.22□□□□□ -1.09
COL6A6-203ENST00000511332 PLNP26678 52 aa8.22□□□□□ -1.09
COL6A6-203ENST00000511332 ODF1Q14990 250 aa8.22□□□□□ -1.09
COL6A6-203ENST00000511332 C2orf82Q6UX34 121 aa8.22□□□□□ -1.09
COL6A6-203ENST00000511332 UNQ6190/PRO20217Q6UXQ8 127 aa8.22□□□□□ -1.09
COL6A6-203ENST00000511332 C6orf48Q9UBA6 75 aa8.22□□□□□ -1.09
COL6A6-203ENST00000511332 IGLV5-39A0A0G2JS06 123 aa8.21□□□□□ -1.1
COL6A6-203ENST00000511332 CHTF8P0CG12 524 aa8.21□□□□□ -1.1
COL6A6-203ENST00000511332 RPL18AQ02543 176 aaKnown RBP8.21□□□□□ -1.1
COL6A6-203ENST00000511332 C10orf25Q5T742 122 aa8.21□□□□□ -1.1
COL6A6-203ENST00000511332 CIRBP-AS1Q8TBR5 109 aa8.21□□□□□ -1.1
COL6A6-203ENST00000511332 APOBP04114 4563 aaKnown RBP8.2□□□□□ -1.1
COL6A6-203ENST00000511332 PANO1I0J062 215 aa8.2□□□□□ -1.1
COL6A6-203ENST00000511332 TLX1NBP0CAT3 122 aa8.2□□□□□ -1.1
COL6A6-203ENST00000511332 PTTG1IPP53801 180 aa8.2□□□□□ -1.1
COL6A6-203ENST00000511332 MAJINQ3KP22 176 aa8.2□□□□□ -1.1
COL6A6-203ENST00000511332 Q8N1X5 172 aa8.2□□□□□ -1.1
COL6A6-203ENST00000511332 DPH3Q96FX2 82 aa8.2□□□□□ -1.1
COL6A6-203ENST00000511332 GAGE2BQ13066 116 aa8.19□□□□□ -1.1
COL6A6-203ENST00000511332 SFTA2Q6UW10 78 aa8.19□□□□□ -1.1
COL6A6-203ENST00000511332 TMEM223A0PJW6 202 aa8.18□□□□□ -1.1
COL6A6-203ENST00000511332 DPM2O94777 84 aa8.18□□□□□ -1.1
COL6A6-203ENST00000511332 HERC2O95714 4834 aa8.18□□□□□ -1.1
COL6A6-203ENST00000511332 A0A087WYN8 130 aa8.17□□□□□ -1.1
COL6A6-203ENST00000511332 NDUFC2-KCTD14E9PQ53 114 aa8.17□□□□□ -1.1
COL6A6-203ENST00000511332 SYS1-DBNDD2H3BUS1 97 aa8.17□□□□□ -1.1
COL6A6-203ENST00000511332 STPG4Q8N801 248 aa8.17□□□□□ -1.1
COL6A6-203ENST00000511332 PLAC8Q9NZF1 115 aa8.17□□□□□ -1.1
COL6A6-203ENST00000511332 HSPG2P98160 4391 aa8.16□□□□□ -1.1
COL6A6-203ENST00000511332 FAM229AH3BQW9 127 aa8.16□□□□□ -1.1
COL6A6-203ENST00000511332 IGKCP01834 107 aa8.16□□□□□ -1.1
COL6A6-203ENST00000511332 SMR3BP02814 79 aaPredicted RBP8.16□□□□□ -1.1
COL6A6-203ENST00000511332 S100A6P06703 90 aa8.16□□□□□ -1.1
COL6A6-203ENST00000511332 Q6ZRP5 223 aa8.16□□□□□ -1.1
COL6A6-203ENST00000511332 LINC00528Q8N1L1 170 aa8.16□□□□□ -1.1
COL6A6-203ENST00000511332 EPM2AB3EWF7 344 aa8.15□□□□□ -1.1
COL6A6-203ENST00000511332 HERVK_113P61574 105 aa8.15□□□□□ -1.1
COL6A6-203ENST00000511332 C9orf116Q5BN46 136 aaPredicted RBP8.15□□□□□ -1.1
COL6A6-203ENST00000511332 Q5VSD8 79 aa8.15□□□□□ -1.1
COL6A6-203ENST00000511332 PET117Q6UWS5 81 aa8.15□□□□□ -1.1
COL6A6-203ENST00000511332 PMCHL2Q9BQD1 86 aa8.15□□□□□ -1.1
COL6A6-203ENST00000511332 DNAH8Q96JB1 4490 aa8.15□□□□□ -1.1
COL6A6-203ENST00000511332 GAGE2EQ4V326 116 aa8.14□□□□□ -1.11
COL6A6-203ENST00000511332 GAGE2DQ9UEU5 116 aa8.14□□□□□ -1.11
COL6A6-203ENST00000511332 PLA2G1BP04054 148 aaKnown RBP8.13□□□□□ -1.11
COL6A6-203ENST00000511332 C3orf79P0CE67 100 aa8.13□□□□□ -1.11
COL6A6-203ENST00000511332 S100A2P29034 98 aa8.13□□□□□ -1.11
COL6A6-203ENST00000511332 KRTDAPP60985 99 aa8.13□□□□□ -1.11
COL6A6-203ENST00000511332 LINC01545Q5VT33 79 aa8.13□□□□□ -1.11
COL6A6-203ENST00000511332 C20orf202A1L168 122 aa8.12□□□□□ -1.11
COL6A6-203ENST00000511332 HIST3H2BBQ8N257 126 aa8.12□□□□□ -1.11
COL6A6-203ENST00000511332 C7orf33Q8WU49 177 aa8.12□□□□□ -1.11
COL6A6-203ENST00000511332 AKR1D1P51857 326 aa8.11□□□□□ -1.11
COL6A6-203ENST00000511332 PLEKHB2Q96CS7 222 aa8.11□□□□□ -1.11
COL6A6-203ENST00000511332 ZNF625Q96I27 306 aaPredicted RBP8.11□□□□□ -1.11
COL6A6-203ENST00000511332 LEPROTO15243 131 aa8.1□□□□□ -1.11
COL6A6-203ENST00000511332 COX17Q14061 63 aa8.1□□□□□ -1.11
COL6A6-203ENST00000511332 KRTAP17-1Q9BYP8 105 aa8.1□□□□□ -1.11
COL6A6-203ENST00000511332 ERG28Q9UKR5 140 aa8.1□□□□□ -1.11
COL6A6-203ENST00000511332 RPL37AP61513 92 aaKnown RBP8.09□□□□□ -1.11
COL6A6-203ENST00000511332 HERV-K104P63124 156 aa8.09□□□□□ -1.11
COL6A6-203ENST00000511332 HIST1H2BLQ99880 126 aa8.09□□□□□ -1.11
COL6A6-203ENST00000511332 MYMXA0A1B0GTQ4 84 aa8.08□□□□□ -1.12
COL6A6-203ENST00000511332 A0A1W2PNN7 141 aa8.08□□□□□ -1.12
COL6A6-203ENST00000511332 J3QQQ9 107 aa8.08□□□□□ -1.12
COL6A6-203ENST00000511332 PFN2P35080 140 aa8.08□□□□□ -1.12
COL6A6-203ENST00000511332 NMUP48645 174 aa8.08□□□□□ -1.12
COL6A6-203ENST00000511332 C9orf129Q5T035 196 aaKnown RBP8.08□□□□□ -1.12
COL6A6-203ENST00000511332 FAM19A5Q7Z5A7 132 aaPredicted RBP8.08□□□□□ -1.12
COL6A6-203ENST00000511332 NDUFA12Q9UI09 145 aa8.08□□□□□ -1.12
COL6A6-203ENST00000511332 FAM168BA1KXE4 195 aa8.07□□□□□ -1.12
COL6A6-203ENST00000511332 E9PLD3 99 aa8.07□□□□□ -1.12
COL6A6-203ENST00000511332 LGALS3P17931 250 aaKnown RBP8.07□□□□□ -1.12
COL6A6-203ENST00000511332 TSPEAR-AS2P59090 65 aa8.07□□□□□ -1.12
COL6A6-203ENST00000511332 SNRPEP62304 92 aaKnown RBP8.07□□□□□ -1.12
COL6A6-203ENST00000511332 KRTAP4-5Q9BYR2 181 aa8.07□□□□□ -1.12
COL6A6-203ENST00000511332 XAGE1AQ9HD64 81 aa8.07□□□□□ -1.12
COL6A6-203ENST00000511332 LINC00587B1AMM8 73 aa8.06□□□□□ -1.12
COL6A6-203ENST00000511332 M0QXV9 152 aa8.06□□□□□ -1.12
COL6A6-203ENST00000511332 MEIG1Q5JSS6 88 aa8.06□□□□□ -1.12
COL6A6-203ENST00000511332 C5orf52A6NGY3 159 aa8.05□□□□□ -1.12
COL6A6-203ENST00000511332 LCE2BO14633 110 aa8.05□□□□□ -1.12
COL6A6-203ENST00000511332 LINC00158P58513 81 aa8.04□□□□□ -1.12
COL6A6-203ENST00000511332 VPS13BQ7Z7G8 4022 aa8.04□□□□□ -1.12
COL6A6-203ENST00000511332 PRR3P79522 188 aaKnown RBP8.03□□□□□ -1.12
COL6A6-203ENST00000511332 PHF5AQ7RTV0 110 aaKnown RBP8.03□□□□□ -1.12
COL6A6-203ENST00000511332 SND1-IT1Q9HBX3 110 aa8.03□□□□□ -1.12
COL6A6-203ENST00000511332 PLA2G2DQ9UNK4 145 aa8.03□□□□□ -1.12
COL6A6-203ENST00000511332 SMIM13P0DJ93 91 aa8.02□□□□□ -1.13
COL6A6-203ENST00000511332 INAFM2P0DMQ5 153 aa8.02□□□□□ -1.13
COL6A6-203ENST00000511332 KRTAP10-4P60372 401 aaPredicted RBP8.02□□□□□ -1.13
COL6A6-203ENST00000511332 SERTAD4-AS1Q5TG53 156 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms