RNA–Protein interactions for RNA: ENST00000510129.5

UBE2D3-229, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-229ENST00000510129 HNRNPA3P51991 378 aaKnown RBP13.33□□□□□ -0.28
UBE2D3-229ENST00000510129 NDUFC2-KCTD14E9PQ53 114 aa13.32□□□□□ -0.28
UBE2D3-229ENST00000510129 LINC00469Q8N7U9 141 aa13.32□□□□□ -0.28
UBE2D3-229ENST00000510129 TOMM7Q9P0U1 55 aa13.32□□□□□ -0.28
UBE2D3-229ENST00000510129 A0A1W2PNN7 141 aa13.31□□□□□ -0.28
UBE2D3-229ENST00000510129 C2orf82Q6UX34 121 aa13.31□□□□□ -0.28
UBE2D3-229ENST00000510129 IGLV5-45A0A087WSX0 123 aa13.3□□□□□ -0.28
UBE2D3-229ENST00000510129 HBDP02042 147 aa13.3□□□□□ -0.28
UBE2D3-229ENST00000510129 PDZD11Q5EBL8 140 aa13.3□□□□□ -0.28
UBE2D3-229ENST00000510129 F8VRH5 84 aa13.28□□□□□ -0.28
UBE2D3-229ENST00000510129 H3BRM9 83 aa13.28□□□□□ -0.28
UBE2D3-229ENST00000510129 ATP5LO75964 103 aa13.28□□□□□ -0.28
UBE2D3-229ENST00000510129 GAGE2EQ4V326 116 aa13.28□□□□□ -0.28
UBE2D3-229ENST00000510129 GAGE2DQ9UEU5 116 aa13.28□□□□□ -0.28
UBE2D3-229ENST00000510129 MYCBP2O75592 4640 aa13.28□□□□□ -0.28
UBE2D3-229ENST00000510129 YPEL4Q96NS1 127 aa13.27□□□□□ -0.29
UBE2D3-229ENST00000510129 SMIM1B2RUZ4 78 aa13.26□□□□□ -0.29
UBE2D3-229ENST00000510129 SPINK6Q6UWN8 80 aa13.26□□□□□ -0.29
UBE2D3-229ENST00000510129 URB1-AS1Q96HZ7 61 aa13.25□□□□□ -0.29
UBE2D3-229ENST00000510129 A0A096LNJ9 63 aa13.24□□□□□ -0.29
UBE2D3-229ENST00000510129 COX7B2Q8TF08 81 aa13.24□□□□□ -0.29
UBE2D3-229ENST00000510129 CHCHD1Q96BP2 118 aaKnown RBP13.24□□□□□ -0.29
UBE2D3-229ENST00000510129 IGLC3P0DOY3 106 aa13.23□□□□□ -0.29
UBE2D3-229ENST00000510129 NDUFA6P56556 154 aa13.23□□□□□ -0.29
UBE2D3-229ENST00000510129 SERTAD4-AS1Q5TG53 156 aa13.21□□□□□ -0.29
UBE2D3-229ENST00000510129 REG3GQ6UW15 175 aa13.21□□□□□ -0.29
UBE2D3-229ENST00000510129 PHF5AQ7RTV0 110 aaKnown RBP13.21□□□□□ -0.29
UBE2D3-229ENST00000510129 FAM19A5Q7Z5A7 132 aaPredicted RBP13.21□□□□□ -0.29
UBE2D3-229ENST00000510129 ODF1Q14990 250 aa13.2□□□□□ -0.3
UBE2D3-229ENST00000510129 FAM168BA1KXE4 195 aa13.19□□□□□ -0.3
UBE2D3-229ENST00000510129 PMCHL1Q16048 86 aa13.19□□□□□ -0.3
UBE2D3-229ENST00000510129 CBLN2Q8IUK8 224 aa13.19□□□□□ -0.3
UBE2D3-229ENST00000510129 PSORS1C2Q9UIG4 136 aa13.19□□□□□ -0.3
UBE2D3-229ENST00000510129 M0QXV9 152 aa13.18□□□□□ -0.3
UBE2D3-229ENST00000510129 SPINK8P0C7L1 97 aa13.18□□□□□ -0.3
UBE2D3-229ENST00000510129 SRSF9Q13242 221 aaKnown RBP eCLIP13.18□□□□□ -0.3
UBE2D3-229ENST00000510129 C9orf129Q5T035 196 aaKnown RBP13.18□□□□□ -0.3
UBE2D3-229ENST00000510129 BAGE3Q86Y29 109 aa13.17□□□□□ -0.3
UBE2D3-229ENST00000510129 C1orf137Q5JT78 98 aa13.16□□□□□ -0.3
UBE2D3-229ENST00000510129 SFTA2Q6UW10 78 aa13.16□□□□□ -0.3
UBE2D3-229ENST00000510129 SLC7A5P1Q8MH63 180 aa13.15□□□□□ -0.3
UBE2D3-229ENST00000510129 LINC01600Q96MT4 127 aa13.15□□□□□ -0.3
UBE2D3-229ENST00000510129 IGLV5-39A0A0G2JS06 123 aa13.14□□□□□ -0.31
UBE2D3-229ENST00000510129 HSBP1O75506 76 aa13.14□□□□□ -0.31
UBE2D3-229ENST00000510129 ZNF22P17026 224 aaPredicted RBP13.14□□□□□ -0.31
UBE2D3-229ENST00000510129 UBE2BP63146 152 aa13.14□□□□□ -0.31
UBE2D3-229ENST00000510129 LBHQ53QV2 105 aaPredicted RBP13.13□□□□□ -0.31
UBE2D3-229ENST00000510129 TRAV12-1A0A0B4J245 112 aa13.12□□□□□ -0.31
UBE2D3-229ENST00000510129 IFI27L1Q96BM0 104 aa13.12□□□□□ -0.31
UBE2D3-229ENST00000510129 CHTOPQ9Y3Y2 248 aaKnown RBP13.12□□□□□ -0.31
UBE2D3-229ENST00000510129 HERC1Q15751 4861 aa13.12□□□□□ -0.31
UBE2D3-229ENST00000510129 TRGC2P03986 189 aa13.11□□□□□ -0.31
UBE2D3-229ENST00000510129 MT1HL1P0DM35 61 aa13.11□□□□□ -0.31
UBE2D3-229ENST00000510129 KRTAP7-1Q8IUC3 87 aa13.11□□□□□ -0.31
UBE2D3-229ENST00000510129 XAGE1AQ9HD64 81 aa13.11□□□□□ -0.31
UBE2D3-229ENST00000510129 TP73-AS1Q9UF72 201 aa13.11□□□□□ -0.31
UBE2D3-229ENST00000510129 IGLV7-43P04211 117 aa13.1□□□□□ -0.31
UBE2D3-229ENST00000510129 TMEM170BQ5T4T1 132 aa13.1□□□□□ -0.31
UBE2D3-229ENST00000510129 DIRC1Q969H9 104 aa13.09□□□□□ -0.31
UBE2D3-229ENST00000510129 C11orf86A6NJI1 115 aa13.08□□□□□ -0.32
UBE2D3-229ENST00000510129 COX17Q14061 63 aa13.08□□□□□ -0.32
UBE2D3-229ENST00000510129 PLA2G2DQ9UNK4 145 aa13.08□□□□□ -0.32
UBE2D3-229ENST00000510129 C22orf24Q9Y442 160 aa13.08□□□□□ -0.32
UBE2D3-229ENST00000510129 PKHD1L1Q86WI1 4243 aa13.07□□□□□ -0.32
UBE2D3-229ENST00000510129 NUPR1O60356 82 aa13.05□□□□□ -0.32
UBE2D3-229ENST00000510129 MRPL55Q7Z7F7 128 aaKnown RBP13.05□□□□□ -0.32
UBE2D3-229ENST00000510129 LRP1Q07954 4544 aaKnown RBP13.04□□□□□ -0.32
UBE2D3-229ENST00000510129 COLCA2A8K830 154 aa13.03□□□□□ -0.32
UBE2D3-229ENST00000510129 ERG28Q9UKR5 140 aa13.03□□□□□ -0.32
UBE2D3-229ENST00000510129 LEPROTL1O95214 131 aa13.02□□□□□ -0.33
UBE2D3-229ENST00000510129 KRTAP11-1Q8IUC1 163 aa13.02□□□□□ -0.33
UBE2D3-229ENST00000510129 FAM19A2Q8N3H0 131 aa13.02□□□□□ -0.33
UBE2D3-229ENST00000510129 HSPB8Q9UJY1 196 aa13.02□□□□□ -0.33
UBE2D3-229ENST00000510129 SERF1AO75920 110 aa13.01□□□□□ -0.33
UBE2D3-229ENST00000510129 PFN2P35080 140 aa13.01□□□□□ -0.33
UBE2D3-229ENST00000510129 NKAPP1Q8N9T2 125 aa13.01□□□□□ -0.33
UBE2D3-229ENST00000510129 FAT3Q8TDW7 4589 aa13.01□□□□□ -0.33
UBE2D3-229ENST00000510129 IGLV5-37A0A075B6J1 123 aa13□□□□□ -0.33
UBE2D3-229ENST00000510129 TMEM223A0PJW6 202 aa13□□□□□ -0.33
UBE2D3-229ENST00000510129 H0Y9J4 135 aa13□□□□□ -0.33
UBE2D3-229ENST00000510129 ZNF625Q96I27 306 aaPredicted RBP12.98□□□□□ -0.33
UBE2D3-229ENST00000510129 KRTAP10-8P60410 259 aa12.97□□□□□ -0.33
UBE2D3-229ENST00000510129 RPL24P83731 157 aaKnown RBP12.97□□□□□ -0.33
UBE2D3-229ENST00000510129 LINC00587B1AMM8 73 aa12.96□□□□□ -0.33
UBE2D3-229ENST00000510129 PLNP26678 52 aa12.96□□□□□ -0.33
UBE2D3-229ENST00000510129 SND1-IT1Q9HBX3 110 aa12.96□□□□□ -0.33
UBE2D3-229ENST00000510129 ZNF861PO60384 105 aa12.95□□□□□ -0.34
UBE2D3-229ENST00000510129 LINC00167Q96N53 147 aa12.95□□□□□ -0.34
UBE2D3-229ENST00000510129 LINC00310P59036 64 aa12.94□□□□□ -0.34
UBE2D3-229ENST00000510129 HERV-K104P63124 156 aa12.94□□□□□ -0.34
UBE2D3-229ENST00000510129 H0Y8G0 127 aa12.93□□□□□ -0.34
UBE2D3-229ENST00000510129 BCE1O60756 84 aa12.93□□□□□ -0.34
UBE2D3-229ENST00000510129 RPL28P46779 137 aaKnown RBP12.93□□□□□ -0.34
UBE2D3-229ENST00000510129 LINC00158P58513 81 aa12.92□□□□□ -0.34
UBE2D3-229ENST00000510129 RPL37AP8A6NKH3 93 aa12.91□□□□□ -0.34
UBE2D3-229ENST00000510129 ATP6V1G1O75348 118 aa12.91□□□□□ -0.34
UBE2D3-229ENST00000510129 IGLV1-50A0A075B6I6 118 aa12.9□□□□□ -0.34
UBE2D3-229ENST00000510129 FABP4P15090 132 aa12.9□□□□□ -0.34
UBE2D3-229ENST00000510129 MAP1LC3CQ9BXW4 147 aa12.9□□□□□ -0.34
UBE2D3-229ENST00000510129 MYMXA0A1B0GTQ4 84 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms