RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 CAMK2N2Q96S95 79 aa5.54□□□□□ -1.52
PDLIM5-213ENST00000509357 C2orf88Q9BSF0 95 aa5.54□□□□□ -1.52
PDLIM5-213ENST00000509357 LINC00474Q9P2X8 69 aa5.54□□□□□ -1.52
PDLIM5-213ENST00000509357 SPAG11BQ08648 103 aa5.53□□□□□ -1.52
PDLIM5-213ENST00000509357 GAGE2BQ13066 116 aa5.53□□□□□ -1.52
PDLIM5-213ENST00000509357 ODF1Q14990 250 aa5.53□□□□□ -1.52
PDLIM5-213ENST00000509357 PLAC8Q9NZF1 115 aa5.53□□□□□ -1.52
PDLIM5-213ENST00000509357 C6orf48Q9UBA6 75 aa5.53□□□□□ -1.52
PDLIM5-213ENST00000509357 LRP1Q07954 4544 aaKnown RBP5.52□□□□□ -1.53
PDLIM5-213ENST00000509357 FAT3Q8TDW7 4589 aa5.52□□□□□ -1.53
PDLIM5-213ENST00000509357 A0A096LNI7 61 aa5.52□□□□□ -1.53
PDLIM5-213ENST00000509357 KRTAP29-1A8MX34 341 aaPredicted RBP5.52□□□□□ -1.53
PDLIM5-213ENST00000509357 ATP5LO75964 103 aa5.52□□□□□ -1.53
PDLIM5-213ENST00000509357 SPINK8P0C7L1 97 aa5.52□□□□□ -1.53
PDLIM5-213ENST00000509357 FABP4P15090 132 aa5.52□□□□□ -1.53
PDLIM5-213ENST00000509357 G0S2P27469 103 aa5.52□□□□□ -1.53
PDLIM5-213ENST00000509357 NDUFA6P56556 154 aa5.52□□□□□ -1.53
PDLIM5-213ENST00000509357 KRTAP10-4P60372 401 aaPredicted RBP5.52□□□□□ -1.53
PDLIM5-213ENST00000509357 UNQ6190/PRO20217Q6UXQ8 127 aa5.52□□□□□ -1.53
PDLIM5-213ENST00000509357 PMCHL2Q9BQD1 86 aa5.52□□□□□ -1.53
PDLIM5-213ENST00000509357 MRPL35Q9NZE8 188 aaKnown RBP5.52□□□□□ -1.53
PDLIM5-213ENST00000509357 TRAV12-1A0A0B4J245 112 aa5.51□□□□□ -1.53
PDLIM5-213ENST00000509357 IGLV5-39A0A0G2JS06 123 aa5.51□□□□□ -1.53
PDLIM5-213ENST00000509357 LOC107984640A0A0U1RRK4 108 aa5.51□□□□□ -1.53
PDLIM5-213ENST00000509357 LINC01549A6NIU2 74 aa5.51□□□□□ -1.53
PDLIM5-213ENST00000509357 LEPROTL1O95214 131 aa5.51□□□□□ -1.53
PDLIM5-213ENST00000509357 HERVK_113P63121 156 aa5.51□□□□□ -1.53
PDLIM5-213ENST00000509357 C9orf116Q5BN46 136 aaPredicted RBP5.51□□□□□ -1.53
PDLIM5-213ENST00000509357 KRTAP7-1Q8IUC3 87 aa5.51□□□□□ -1.53
PDLIM5-213ENST00000509357 LINC01561Q8N1V8 128 aa5.51□□□□□ -1.53
PDLIM5-213ENST00000509357 LINC00469Q8N7U9 141 aa5.51□□□□□ -1.53
PDLIM5-213ENST00000509357 OR10D4PQ8NGN7 298 aa5.51□□□□□ -1.53
PDLIM5-213ENST00000509357 OXTP01178 125 aa5.5□□□□□ -1.53
PDLIM5-213ENST00000509357 RPL18AQ02543 176 aaKnown RBP5.5□□□□□ -1.53
PDLIM5-213ENST00000509357 PAPPA-AS1Q5QFB9 102 aa5.5□□□□□ -1.53
PDLIM5-213ENST00000509357 C2orf48Q96LS8 159 aa5.5□□□□□ -1.53
PDLIM5-213ENST00000509357 CHTOPQ9Y3Y2 248 aaKnown RBP5.5□□□□□ -1.53
PDLIM5-213ENST00000509357 F8VRH5 84 aa5.49□□□□□ -1.53
PDLIM5-213ENST00000509357 H0Y8G0 127 aa5.49□□□□□ -1.53
PDLIM5-213ENST00000509357 HNRNPA3P51991 378 aaKnown RBP5.49□□□□□ -1.53
PDLIM5-213ENST00000509357 PTTG1IPP53801 180 aa5.49□□□□□ -1.53
PDLIM5-213ENST00000509357 TSPEAR-AS2P59090 65 aa5.49□□□□□ -1.53
PDLIM5-213ENST00000509357 GEMIN7Q9H840 131 aaKnown RBP5.49□□□□□ -1.53
PDLIM5-213ENST00000509357 TMEM223A0PJW6 202 aa5.48□□□□□ -1.53
PDLIM5-213ENST00000509357 NDUFA1O15239 70 aa5.48□□□□□ -1.53
PDLIM5-213ENST00000509357 C3orf79P0CE67 100 aa5.48□□□□□ -1.53
PDLIM5-213ENST00000509357 Q6ZRP5 223 aa5.48□□□□□ -1.53
PDLIM5-213ENST00000509357 Q8IZM0 81 aa5.48□□□□□ -1.53
PDLIM5-213ENST00000509357 HIST3H2BBQ8N257 126 aa5.48□□□□□ -1.53
PDLIM5-213ENST00000509357 TOMM7Q9P0U1 55 aa5.48□□□□□ -1.53
PDLIM5-213ENST00000509357 A0A1W2PNN7 141 aa5.47□□□□□ -1.53
PDLIM5-213ENST00000509357 FAM168BA1KXE4 195 aa5.47□□□□□ -1.53
PDLIM5-213ENST00000509357 F8WDY8 70 aa5.47□□□□□ -1.53
PDLIM5-213ENST00000509357 PRSS2P07478 247 aa5.47□□□□□ -1.53
PDLIM5-213ENST00000509357 SEC11AP67812 179 aa5.47□□□□□ -1.53
PDLIM5-213ENST00000509357 COX7B2Q8TF08 81 aa5.47□□□□□ -1.53
PDLIM5-213ENST00000509357 SYS1-DBNDD2H3BUS1 97 aa5.46□□□□□ -1.54
PDLIM5-213ENST00000509357 PRR3P79522 188 aaKnown RBP5.46□□□□□ -1.54
PDLIM5-213ENST00000509357 RNF151Q2KHN1 245 aa5.46□□□□□ -1.54
PDLIM5-213ENST00000509357 C9orf129Q5T035 196 aaKnown RBP5.46□□□□□ -1.54
PDLIM5-213ENST00000509357 TMEM170BQ5T4T1 132 aa5.46□□□□□ -1.54
PDLIM5-213ENST00000509357 LINC01545Q5VT33 79 aa5.46□□□□□ -1.54
PDLIM5-213ENST00000509357 KRTAP11-1Q8IUC1 163 aa5.46□□□□□ -1.54
PDLIM5-213ENST00000509357 HSPB8Q9UJY1 196 aa5.46□□□□□ -1.54
PDLIM5-213ENST00000509357 TLX1NBP0CAT3 122 aa5.45□□□□□ -1.54
PDLIM5-213ENST00000509357 GAGE2EQ4V326 116 aa5.45□□□□□ -1.54
PDLIM5-213ENST00000509357 Q8NDZ9 215 aa5.45□□□□□ -1.54
PDLIM5-213ENST00000509357 ZNF625Q96I27 306 aaPredicted RBP5.45□□□□□ -1.54
PDLIM5-213ENST00000509357 PACRGQ96M98 296 aaPredicted RBP5.45□□□□□ -1.54
PDLIM5-213ENST00000509357 HIST1H2BLQ99880 126 aa5.45□□□□□ -1.54
PDLIM5-213ENST00000509357 GAGE2DQ9UEU5 116 aa5.45□□□□□ -1.54
PDLIM5-213ENST00000509357 C5orf52A6NGY3 159 aa5.44□□□□□ -1.54
PDLIM5-213ENST00000509357 CKS1BP61024 79 aa5.44□□□□□ -1.54
PDLIM5-213ENST00000509357 SNRPEP62304 92 aaKnown RBP5.44□□□□□ -1.54
PDLIM5-213ENST00000509357 C6orf226Q5I0X4 101 aa5.44□□□□□ -1.54
PDLIM5-213ENST00000509357 SERTAD4-AS1Q5TG53 156 aa5.44□□□□□ -1.54
PDLIM5-213ENST00000509357 IGKV2D-26A0A0A0MRZ7 120 aa5.43□□□□□ -1.54
PDLIM5-213ENST00000509357 TRBV30A0A0K0K1B3 111 aa5.43□□□□□ -1.54
PDLIM5-213ENST00000509357 MAP1LC3CQ9BXW4 147 aa5.43□□□□□ -1.54
PDLIM5-213ENST00000509357 H3BRM9 83 aa5.42□□□□□ -1.54
PDLIM5-213ENST00000509357 DPM2O94777 84 aa5.42□□□□□ -1.54
PDLIM5-213ENST00000509357 IGKCP01834 107 aa5.42□□□□□ -1.54
PDLIM5-213ENST00000509357 PHF5AQ7RTV0 110 aaKnown RBP5.42□□□□□ -1.54
PDLIM5-213ENST00000509357 FAM19A5Q7Z5A7 132 aaPredicted RBP5.42□□□□□ -1.54
PDLIM5-213ENST00000509357 TTTY13Q9BZ97 58 aa5.42□□□□□ -1.54
PDLIM5-213ENST00000509357 HMCN2Q8NDA2 5059 aa5.42□□□□□ -1.54
PDLIM5-213ENST00000509357 TNXBP22105 4242 aa5.42□□□□□ -1.54
PDLIM5-213ENST00000509357 NDUFC2-KCTD14E9PQ53 114 aa5.41□□□□□ -1.54
PDLIM5-213ENST00000509357 KRTDAPP60985 99 aa5.41□□□□□ -1.54
PDLIM5-213ENST00000509357 REG3GQ6UW15 175 aa5.41□□□□□ -1.54
PDLIM5-213ENST00000509357 SPINK6Q6UWN8 80 aa5.41□□□□□ -1.54
PDLIM5-213ENST00000509357 PET117Q6UWS5 81 aa5.41□□□□□ -1.54
PDLIM5-213ENST00000509357 ATOH7Q8N100 152 aa5.41□□□□□ -1.54
PDLIM5-213ENST00000509357 XAGE1AQ9HD64 81 aa5.41□□□□□ -1.54
PDLIM5-213ENST00000509357 PLNP26678 52 aa5.4□□□□□ -1.54
PDLIM5-213ENST00000509357 CXCL5P42830 114 aa5.4□□□□□ -1.54
PDLIM5-213ENST00000509357 UBE2BP63146 152 aa5.4□□□□□ -1.54
PDLIM5-213ENST00000509357 ANKRD39Q53RE8 183 aa5.4□□□□□ -1.54
PDLIM5-213ENST00000509357 C1orf137Q5JT78 98 aa5.4□□□□□ -1.54
PDLIM5-213ENST00000509357 PSORS1C2Q9UIG4 136 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms