RNA–Protein interactions for RNA: ENST00000508715.5

PTPN20-220, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-220ENST00000508715 SYS1-DBNDD2H3BUS1 97 aa6.61□□□□□ -1.35
PTPN20-220ENST00000508715 C3orf79P0CE67 100 aa6.61□□□□□ -1.35
PTPN20-220ENST00000508715 Q8IZM0 81 aa6.61□□□□□ -1.35
PTPN20-220ENST00000508715 CARD19Q96LW7 228 aa6.61□□□□□ -1.35
PTPN20-220ENST00000508715 CAMK2N2Q96S95 79 aa6.61□□□□□ -1.35
PTPN20-220ENST00000508715 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.61□□□□□ -1.35
PTPN20-220ENST00000508715 TMEM223A0PJW6 202 aa6.6□□□□□ -1.35
PTPN20-220ENST00000508715 C5orf52A6NGY3 159 aa6.6□□□□□ -1.35
PTPN20-220ENST00000508715 CHTF8P0CG12 524 aa6.6□□□□□ -1.35
PTPN20-220ENST00000508715 SNRPEP62304 92 aaKnown RBP6.6□□□□□ -1.35
PTPN20-220ENST00000508715 LINC01545Q5VT33 79 aa6.6□□□□□ -1.35
PTPN20-220ENST00000508715 HIST1H2BLQ99880 126 aa6.6□□□□□ -1.35
PTPN20-220ENST00000508715 TOMM7Q9P0U1 55 aa6.6□□□□□ -1.35
PTPN20-220ENST00000508715 A0A096LNI7 61 aa6.59□□□□□ -1.35
PTPN20-220ENST00000508715 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.59□□□□□ -1.35
PTPN20-220ENST00000508715 CIRBPQ14011 172 aaKnown RBP6.59□□□□□ -1.35
PTPN20-220ENST00000508715 C9orf116Q5BN46 136 aaPredicted RBP6.59□□□□□ -1.35
PTPN20-220ENST00000508715 TMEM170BQ5T4T1 132 aa6.59□□□□□ -1.35
PTPN20-220ENST00000508715 COX7B2Q8TF08 81 aa6.59□□□□□ -1.35
PTPN20-220ENST00000508715 MAP1LC3CQ9BXW4 147 aa6.59□□□□□ -1.35
PTPN20-220ENST00000508715 F8WDY8 70 aa6.58□□□□□ -1.36
PTPN20-220ENST00000508715 H3BRM9 83 aa6.58□□□□□ -1.36
PTPN20-220ENST00000508715 NDUFA1O15239 70 aa6.58□□□□□ -1.36
PTPN20-220ENST00000508715 CDK2AP2O75956 126 aa6.58□□□□□ -1.36
PTPN20-220ENST00000508715 RNF151Q2KHN1 245 aa6.58□□□□□ -1.36
PTPN20-220ENST00000508715 DPM2O94777 84 aa6.57□□□□□ -1.36
PTPN20-220ENST00000508715 SMCPP49901 116 aaPredicted RBP6.57□□□□□ -1.36
PTPN20-220ENST00000508715 C6orf226Q5I0X4 101 aa6.57□□□□□ -1.36
PTPN20-220ENST00000508715 PET117Q6UWS5 81 aa6.57□□□□□ -1.36
PTPN20-220ENST00000508715 VPS13BQ7Z7G8 4022 aa6.57□□□□□ -1.36
PTPN20-220ENST00000508715 TRBV30A0A0K0K1B3 111 aa6.56□□□□□ -1.36
PTPN20-220ENST00000508715 IGKCP01834 107 aa6.56□□□□□ -1.36
PTPN20-220ENST00000508715 TSPEAR-AS2P59090 65 aa6.56□□□□□ -1.36
PTPN20-220ENST00000508715 KRTDAPP60985 99 aa6.56□□□□□ -1.36
PTPN20-220ENST00000508715 SCXQ7RTU7 201 aa6.56□□□□□ -1.36
PTPN20-220ENST00000508715 SPACA4Q8TDM5 124 aa6.56□□□□□ -1.36
PTPN20-220ENST00000508715 S100A6P06703 90 aa6.55□□□□□ -1.36
PTPN20-220ENST00000508715 PRSS2P07478 247 aa6.55□□□□□ -1.36
PTPN20-220ENST00000508715 TLX1NBP0CAT3 122 aa6.55□□□□□ -1.36
PTPN20-220ENST00000508715 PLNP26678 52 aa6.55□□□□□ -1.36
PTPN20-220ENST00000508715 LCE2CQ5TA81 110 aa6.55□□□□□ -1.36
PTPN20-220ENST00000508715 Q6ZRP5 223 aa6.55□□□□□ -1.36
PTPN20-220ENST00000508715 CIRBP-AS1Q8TBR5 109 aa6.55□□□□□ -1.36
PTPN20-220ENST00000508715 ZNF625Q96I27 306 aaPredicted RBP6.55□□□□□ -1.36
PTPN20-220ENST00000508715 IGKV2-24A0A0C4DH68 120 aa6.54□□□□□ -1.36
PTPN20-220ENST00000508715 LOC107984640A0A0U1RRK4 108 aa6.54□□□□□ -1.36
PTPN20-220ENST00000508715 PTTG1IPP53801 180 aa6.54□□□□□ -1.36
PTPN20-220ENST00000508715 CKS1BP61024 79 aa6.54□□□□□ -1.36
PTPN20-220ENST00000508715 KRTAP7-1Q8IUC3 87 aa6.54□□□□□ -1.36
PTPN20-220ENST00000508715 A0A087WYN8 130 aa6.53□□□□□ -1.36
PTPN20-220ENST00000508715 EPM2AB3EWF7 344 aa6.53□□□□□ -1.36
PTPN20-220ENST00000508715 CXCL5P42830 114 aa6.53□□□□□ -1.36
PTPN20-220ENST00000508715 GAGE2BQ13066 116 aa6.53□□□□□ -1.36
PTPN20-220ENST00000508715 STPG4Q8N801 248 aa6.53□□□□□ -1.36
PTPN20-220ENST00000508715 KRTAP4-5Q9BYR2 181 aa6.53□□□□□ -1.36
PTPN20-220ENST00000508715 IGKV2D-26A0A0A0MRZ7 120 aa6.52□□□□□ -1.37
PTPN20-220ENST00000508715 A0A1W2PNN7 141 aa6.52□□□□□ -1.37
PTPN20-220ENST00000508715 NDUFC2-KCTD14E9PQ53 114 aa6.52□□□□□ -1.37
PTPN20-220ENST00000508715 SMR3BP02814 79 aaPredicted RBP6.52□□□□□ -1.37
PTPN20-220ENST00000508715 S100A2P29034 98 aa6.52□□□□□ -1.37
PTPN20-220ENST00000508715 RPL18AQ02543 176 aaKnown RBP6.52□□□□□ -1.37
PTPN20-220ENST00000508715 C9orf129Q5T035 196 aaKnown RBP6.52□□□□□ -1.37
PTPN20-220ENST00000508715 PLAC8Q9NZF1 115 aa6.52□□□□□ -1.37
PTPN20-220ENST00000508715 FAM168BA1KXE4 195 aa6.51□□□□□ -1.37
PTPN20-220ENST00000508715 LEPROTO15243 131 aa6.51□□□□□ -1.37
PTPN20-220ENST00000508715 MAJINQ3KP22 176 aa6.51□□□□□ -1.37
PTPN20-220ENST00000508715 GAGE2EQ4V326 116 aa6.51□□□□□ -1.37
PTPN20-220ENST00000508715 ATOH7Q8N100 152 aa6.51□□□□□ -1.37
PTPN20-220ENST00000508715 GAGE2DQ9UEU5 116 aa6.51□□□□□ -1.37
PTPN20-220ENST00000508715 TMA7Q9Y2S6 64 aaKnown RBP6.51□□□□□ -1.37
PTPN20-220ENST00000508715 E9PLD3 99 aa6.5□□□□□ -1.37
PTPN20-220ENST00000508715 J3QQQ9 107 aa6.5□□□□□ -1.37
PTPN20-220ENST00000508715 ANKRD39Q53RE8 183 aa6.5□□□□□ -1.37
PTPN20-220ENST00000508715 PKHD1L1Q86WI1 4243 aa6.5□□□□□ -1.37
PTPN20-220ENST00000508715 KRTAP10-4P60372 401 aaPredicted RBP6.49□□□□□ -1.37
PTPN20-220ENST00000508715 PLEKHB2Q96CS7 222 aa6.49□□□□□ -1.37
PTPN20-220ENST00000508715 TTTY13Q9BZ97 58 aa6.49□□□□□ -1.37
PTPN20-220ENST00000508715 XAGE1AQ9HD64 81 aa6.49□□□□□ -1.37
PTPN20-220ENST00000508715 NDUFA12Q9UI09 145 aa6.49□□□□□ -1.37
PTPN20-220ENST00000508715 SRRM2Q9UQ35 2752 aaKnown RBP6.48□□□□□ -1.37
PTPN20-220ENST00000508715 Q8N1X5 172 aa6.48□□□□□ -1.37
PTPN20-220ENST00000508715 ERG28Q9UKR5 140 aa6.48□□□□□ -1.37
PTPN20-220ENST00000508715 ABCA13Q86UQ4 5058 aa6.48□□□□□ -1.37
PTPN20-220ENST00000508715 PFN2P35080 140 aa6.47□□□□□ -1.37
PTPN20-220ENST00000508715 HERVK_113P61574 105 aa6.47□□□□□ -1.37
PTPN20-220ENST00000508715 SERTAD4-AS1Q5TG53 156 aa6.47□□□□□ -1.37
PTPN20-220ENST00000508715 KRTAP11-1Q8IUC1 163 aa6.47□□□□□ -1.37
PTPN20-220ENST00000508715 Q8NDZ9 215 aa6.47□□□□□ -1.37
PTPN20-220ENST00000508715 FLG2Q5D862 2391 aaPredicted RBP6.47□□□□□ -1.37
PTPN20-220ENST00000508715 A0A0U1RRA0 63 aa6.46□□□□□ -1.38
PTPN20-220ENST00000508715 C20orf202A1L168 122 aa6.46□□□□□ -1.38
PTPN20-220ENST00000508715 SMIM13P0DJ93 91 aa6.46□□□□□ -1.38
PTPN20-220ENST00000508715 LINC00528Q8N1L1 170 aa6.46□□□□□ -1.38
PTPN20-220ENST00000508715 DPH3Q96FX2 82 aa6.46□□□□□ -1.38
PTPN20-220ENST00000508715 LINC00474Q9P2X8 69 aa6.46□□□□□ -1.38
PTPN20-220ENST00000508715 PKIGQ9Y2B9 76 aa6.46□□□□□ -1.38
PTPN20-220ENST00000508715 MYMXA0A1B0GTQ4 84 aa6.45□□□□□ -1.38
PTPN20-220ENST00000508715 LORP23490 312 aaPredicted RBP6.45□□□□□ -1.38
PTPN20-220ENST00000508715 SFTA2Q6UW10 78 aa6.45□□□□□ -1.38
PTPN20-220ENST00000508715 PHF5AQ7RTV0 110 aaKnown RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms