RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 C12orf57Q99622 126 aa10.18□□□□□ -0.78
LMNA-222ENST00000508500 PLA2G2DQ9UNK4 145 aa10.18□□□□□ -0.78
LMNA-222ENST00000508500 UBE2D4Q9Y2X8 147 aa10.18□□□□□ -0.78
LMNA-222ENST00000508500 RPL39P62891 51 aaKnown RBP10.17□□□□□ -0.78
LMNA-222ENST00000508500 MRPS36P82909 103 aaKnown RBP10.17□□□□□ -0.78
LMNA-222ENST00000508500 SS18Q15532 418 aa10.17□□□□□ -0.78
LMNA-222ENST00000508500 RNASE13Q5GAN3 156 aaKnown RBP10.17□□□□□ -0.78
LMNA-222ENST00000508500 CD164L2Q6UWJ8 174 aa10.17□□□□□ -0.78
LMNA-222ENST00000508500 TEX43Q6ZNM6 134 aa10.17□□□□□ -0.78
LMNA-222ENST00000508500 Q6ZRU5 148 aa10.17□□□□□ -0.78
LMNA-222ENST00000508500 PMVKQ15126 192 aa10.16□□□□□ -0.78
LMNA-222ENST00000508500 STPG4Q8N801 248 aa10.16□□□□□ -0.78
LMNA-222ENST00000508500 FAM104AQ969W3 186 aa10.16□□□□□ -0.78
LMNA-222ENST00000508500 ODF1Q14990 250 aa10.14□□□□□ -0.79
LMNA-222ENST00000508500 CARD19Q96LW7 228 aa10.14□□□□□ -0.79
LMNA-222ENST00000508500 IGLV4-3A0A075B6K6 122 aa10.13□□□□□ -0.79
LMNA-222ENST00000508500 F8VRH5 84 aa10.13□□□□□ -0.79
LMNA-222ENST00000508500 PLNP26678 52 aa10.13□□□□□ -0.79
LMNA-222ENST00000508500 Q6ZUT4 128 aa10.13□□□□□ -0.79
LMNA-222ENST00000508500 AMELXQ99217 191 aa10.13□□□□□ -0.79
LMNA-222ENST00000508500 VCX2Q9H322 139 aa10.13□□□□□ -0.79
LMNA-222ENST00000508500 SYCNQ0VAF6 134 aa10.12□□□□□ -0.79
LMNA-222ENST00000508500 C7orf33Q8WU49 177 aa10.12□□□□□ -0.79
LMNA-222ENST00000508500 CST9LQ9H4G1 147 aa10.12□□□□□ -0.79
LMNA-222ENST00000508500 IGLV4-69A0A075B6H9 119 aa10.11□□□□□ -0.79
LMNA-222ENST00000508500 HSBP1L1C9JCN9 74 aa10.11□□□□□ -0.79
LMNA-222ENST00000508500 ZNF561-AS1K7EIQ3 104 aa10.11□□□□□ -0.79
LMNA-222ENST00000508500 DPM2O94777 84 aa10.11□□□□□ -0.79
LMNA-222ENST00000508500 PRR3P79522 188 aaKnown RBP10.11□□□□□ -0.79
LMNA-222ENST00000508500 C2orf88Q9BSF0 95 aa10.11□□□□□ -0.79
LMNA-222ENST00000508500 VAMP8Q9BV40 100 aa10.11□□□□□ -0.79
LMNA-222ENST00000508500 CHTOPQ9Y3Y2 248 aaKnown RBP10.11□□□□□ -0.79
LMNA-222ENST00000508500 TRAV13-1A0A0B4J241 112 aa10.1□□□□□ -0.79
LMNA-222ENST00000508500 H0Y8G0 127 aa10.1□□□□□ -0.79
LMNA-222ENST00000508500 IGKCP01834 107 aa10.1□□□□□ -0.79
LMNA-222ENST00000508500 C5orf38Q86SI9 138 aa10.1□□□□□ -0.79
LMNA-222ENST00000508500 COX7A2LO14548 114 aa10.09□□□□□ -0.79
LMNA-222ENST00000508500 SEC11AP67812 179 aa10.09□□□□□ -0.79
LMNA-222ENST00000508500 OPRPNQ99935 248 aaPredicted RBP10.09□□□□□ -0.79
LMNA-222ENST00000508500 PTTG1IPP53801 180 aa10.08□□□□□ -0.8
LMNA-222ENST00000508500 FAM19A3Q7Z5A8 133 aa10.08□□□□□ -0.8
LMNA-222ENST00000508500 MRPL35Q9NZE8 188 aaKnown RBP10.08□□□□□ -0.8
LMNA-222ENST00000508500 IGLC3P0DOY3 106 aa10.07□□□□□ -0.8
LMNA-222ENST00000508500 MALP21145 153 aa10.07□□□□□ -0.8
LMNA-222ENST00000508500 LINC00474Q9P2X8 69 aa10.07□□□□□ -0.8
LMNA-222ENST00000508500 A0A1W2PNN7 141 aa10.06□□□□□ -0.8
LMNA-222ENST00000508500 LOC107984640A0A0U1RRK4 108 aa10.05□□□□□ -0.8
LMNA-222ENST00000508500 TINCRA0A1B0GVN0 87 aa10.05□□□□□ -0.8
LMNA-222ENST00000508500 GAGE2BQ13066 116 aa10.05□□□□□ -0.8
LMNA-222ENST00000508500 C2orf48Q96LS8 159 aa10.05□□□□□ -0.8
LMNA-222ENST00000508500 CAMK2N2Q96S95 79 aa10.05□□□□□ -0.8
LMNA-222ENST00000508500 PKIGQ9Y2B9 76 aa10.05□□□□□ -0.8
LMNA-222ENST00000508500 IGHV3OR16-9A0A0B4J2B5 98 aa10.04□□□□□ -0.8
LMNA-222ENST00000508500 A0A0J9YXV3 536 aa10.04□□□□□ -0.8
LMNA-222ENST00000508500 TSTD3H0UI37 97 aa10.04□□□□□ -0.8
LMNA-222ENST00000508500 SRSF9Q13242 221 aaKnown RBP eCLIP10.04□□□□□ -0.8
LMNA-222ENST00000508500 SPATA45Q537H7 98 aa10.04□□□□□ -0.8
LMNA-222ENST00000508500 LINC01600Q96MT4 127 aa10.04□□□□□ -0.8
LMNA-222ENST00000508500 PMCHL2Q9BQD1 86 aa10.04□□□□□ -0.8
LMNA-222ENST00000508500 C11orf86A6NJI1 115 aa10.03□□□□□ -0.8
LMNA-222ENST00000508500 UBE2D1P51668 147 aa10.03□□□□□ -0.8
LMNA-222ENST00000508500 ATOH7Q8N100 152 aa10.03□□□□□ -0.8
LMNA-222ENST00000508500 PAM16Q9Y3D7 125 aa10.03□□□□□ -0.8
LMNA-222ENST00000508500 APOMO95445 188 aa10.02□□□□□ -0.81
LMNA-222ENST00000508500 HERVK_113P61574 105 aa10.02□□□□□ -0.81
LMNA-222ENST00000508500 HERVK_113P63121 156 aa10.02□□□□□ -0.81
LMNA-222ENST00000508500 SPAG11BQ08648 103 aa10.02□□□□□ -0.81
LMNA-222ENST00000508500 ZC2HC1BQ5TFG8 222 aa10.02□□□□□ -0.81
LMNA-222ENST00000508500 LRP2P98164 4655 aa10□□□□□ -0.81
LMNA-222ENST00000508500 IGLV5-45A0A087WSX0 123 aa10□□□□□ -0.81
LMNA-222ENST00000508500 C9orf116Q5BN46 136 aaPredicted RBP10□□□□□ -0.81
LMNA-222ENST00000508500 C10orf25Q5T742 122 aa10□□□□□ -0.81
LMNA-222ENST00000508500 SPINK6Q6UWN8 80 aa10□□□□□ -0.81
LMNA-222ENST00000508500 Q6ZRP5 223 aa10□□□□□ -0.81
LMNA-222ENST00000508500 ORAOV1Q8WV07 137 aa10□□□□□ -0.81
LMNA-222ENST00000508500 GEMIN7Q9H840 131 aaKnown RBP10□□□□□ -0.81
LMNA-222ENST00000508500 H3BRM9 83 aa9.99□□□□□ -0.81
LMNA-222ENST00000508500 KRTAP10-8P60410 259 aa9.99□□□□□ -0.81
LMNA-222ENST00000508500 RNF151Q2KHN1 245 aa9.99□□□□□ -0.81
LMNA-222ENST00000508500 E9PLD3 99 aa9.98□□□□□ -0.81
LMNA-222ENST00000508500 ZNF22P17026 224 aaPredicted RBP9.98□□□□□ -0.81
LMNA-222ENST00000508500 RPL18AQ02543 176 aaKnown RBP9.98□□□□□ -0.81
LMNA-222ENST00000508500 UQCR10Q9UDW1 63 aa9.98□□□□□ -0.81
LMNA-222ENST00000508500 DLEU1O43261 78 aa9.97□□□□□ -0.81
LMNA-222ENST00000508500 COX8AP10176 69 aa9.97□□□□□ -0.81
LMNA-222ENST00000508500 KIAA0087Q14695 138 aa9.97□□□□□ -0.81
LMNA-222ENST00000508500 ANKRD39Q53RE8 183 aa9.97□□□□□ -0.81
LMNA-222ENST00000508500 TMEM170BQ5T4T1 132 aa9.97□□□□□ -0.81
LMNA-222ENST00000508500 LINC00242Q5T6M2 205 aa9.97□□□□□ -0.81
LMNA-222ENST00000508500 UNQ6190/PRO20217Q6UXQ8 127 aa9.97□□□□□ -0.81
LMNA-222ENST00000508500 PHF5AQ7RTV0 110 aaKnown RBP9.97□□□□□ -0.81
LMNA-222ENST00000508500 MIEN1Q9BRT3 115 aa9.97□□□□□ -0.81
LMNA-222ENST00000508500 TMEM223A0PJW6 202 aa9.96□□□□□ -0.82
LMNA-222ENST00000508500 KRTAP11-1Q8IUC1 163 aa9.96□□□□□ -0.82
LMNA-222ENST00000508500 LINC01561Q8N1V8 128 aa9.96□□□□□ -0.82
LMNA-222ENST00000508500 C6orf48Q9UBA6 75 aa9.96□□□□□ -0.82
LMNA-222ENST00000508500 PSORS1C2Q9UIG4 136 aa9.96□□□□□ -0.82
LMNA-222ENST00000508500 A0A087WZ39 114 aa9.95□□□□□ -0.82
LMNA-222ENST00000508500 FAM168BA1KXE4 195 aa9.95□□□□□ -0.82
LMNA-222ENST00000508500 SLC25A34Q6PIV7 304 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms