RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 PRELID3AQ96N28 172 aa2.88□□□□□ -1.95
NUP54-206ENST00000508465 KIR2DL4Q99706 377 aa2.88□□□□□ -1.95
NUP54-206ENST00000508465 C20orf78Q9BR46 151 aa2.88□□□□□ -1.95
NUP54-206ENST00000508465 MYCBP2O75592 4640 aa2.88□□□□□ -1.95
NUP54-206ENST00000508465 ZNF25P17030 456 aaPredicted RBP2.87□□□□□ -1.95
NUP54-206ENST00000508465 ADCYAP1P18509 176 aa2.87□□□□□ -1.95
NUP54-206ENST00000508465 CNBPP62633 177 aaKnown RBP2.87□□□□□ -1.95
NUP54-206ENST00000508465 COX6A2Q02221 97 aa2.87□□□□□ -1.95
NUP54-206ENST00000508465 Q6ZUT4 128 aa2.87□□□□□ -1.95
NUP54-206ENST00000508465 COMMD7Q86VX2 200 aa2.87□□□□□ -1.95
NUP54-206ENST00000508465 ORMDL3Q8N138 153 aa2.87□□□□□ -1.95
NUP54-206ENST00000508465 PRAC1Q96KF2 57 aa2.87□□□□□ -1.95
NUP54-206ENST00000508465 SMIM2Q9BVW6 85 aa2.87□□□□□ -1.95
NUP54-206ENST00000508465 UBE2D4Q9Y2X8 147 aa2.87□□□□□ -1.95
NUP54-206ENST00000508465 FLG2Q5D862 2391 aaPredicted RBP2.87□□□□□ -1.95
NUP54-206ENST00000508465 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.86□□□□□ -1.95
NUP54-206ENST00000508465 IGHV1-58A0A0C4DH39 117 aa2.86□□□□□ -1.95
NUP54-206ENST00000508465 IGKV2-24A0A0C4DH68 120 aa2.86□□□□□ -1.95
NUP54-206ENST00000508465 A0A0J9YXV3 536 aa2.86□□□□□ -1.95
NUP54-206ENST00000508465 C1orf196B1AJZ1 125 aa2.86□□□□□ -1.95
NUP54-206ENST00000508465 COX7A2LO14548 114 aa2.86□□□□□ -1.95
NUP54-206ENST00000508465 PPBPP02775 128 aa2.86□□□□□ -1.95
NUP54-206ENST00000508465 RAB5AP20339 215 aa2.86□□□□□ -1.95
NUP54-206ENST00000508465 KRTAP10-4P60372 401 aaPredicted RBP2.86□□□□□ -1.95
NUP54-206ENST00000508465 RPL32P62910 135 aaKnown RBP2.86□□□□□ -1.95
NUP54-206ENST00000508465 ATP5L2Q7Z4Y8 100 aa2.86□□□□□ -1.95
NUP54-206ENST00000508465 IMMP2LQ96T52 175 aa2.86□□□□□ -1.95
NUP54-206ENST00000508465 IGLV4-69A0A075B6H9 119 aa2.85□□□□□ -1.95
NUP54-206ENST00000508465 GVQW2A0A096LPI5 108 aaPredicted RBP2.85□□□□□ -1.95
NUP54-206ENST00000508465 PHOX2AO14813 284 aa2.85□□□□□ -1.95
NUP54-206ENST00000508465 IFI27P40305 119 aaPredicted RBP2.85□□□□□ -1.95
NUP54-206ENST00000508465 HNRNPA3P51991 378 aaKnown RBP2.85□□□□□ -1.95
NUP54-206ENST00000508465 RPL37AP61513 92 aaKnown RBP2.85□□□□□ -1.95
NUP54-206ENST00000508465 UQCC3Q6UW78 93 aa2.85□□□□□ -1.95
NUP54-206ENST00000508465 Q8N8P6 123 aa2.85□□□□□ -1.95
NUP54-206ENST00000508465 TIMM21Q9BVV7 248 aa2.85□□□□□ -1.95
NUP54-206ENST00000508465 MAP1LC3AQ9H492 121 aa2.85□□□□□ -1.95
NUP54-206ENST00000508465 CHTOPQ9Y3Y2 248 aaKnown RBP2.85□□□□□ -1.95
NUP54-206ENST00000508465 CSDC2Q9Y534 153 aaKnown RBP2.85□□□□□ -1.95
NUP54-206ENST00000508465 IGLV4-3A0A075B6K6 122 aa2.84□□□□□ -1.95
NUP54-206ENST00000508465 A0A096LNI7 61 aa2.84□□□□□ -1.95
NUP54-206ENST00000508465 RPL13AP40429 203 aaKnown RBP2.84□□□□□ -1.95
NUP54-206ENST00000508465 SYCNQ0VAF6 134 aa2.84□□□□□ -1.95
NUP54-206ENST00000508465 SMAGPQ0VAQ4 97 aa2.84□□□□□ -1.95
NUP54-206ENST00000508465 FABP9Q0Z7S8 132 aa2.84□□□□□ -1.95
NUP54-206ENST00000508465 C10orf91Q5T1B1 145 aa2.84□□□□□ -1.95
NUP54-206ENST00000508465 Q6ZRU5 148 aa2.84□□□□□ -1.95
NUP54-206ENST00000508465 KRTAP5-5Q701N2 237 aaPredicted RBP2.84□□□□□ -1.95
NUP54-206ENST00000508465 SPACA4Q8TDM5 124 aa2.84□□□□□ -1.95
NUP54-206ENST00000508465 CARD19Q96LW7 228 aa2.84□□□□□ -1.95
NUP54-206ENST00000508465 SEC11CQ9BY50 192 aa2.84□□□□□ -1.95
NUP54-206ENST00000508465 SPANXA1Q9NS26 97 aa2.84□□□□□ -1.95
NUP54-206ENST00000508465 LRP1Q07954 4544 aaKnown RBP2.83□□□□□ -1.96
NUP54-206ENST00000508465 TGIF2-C20orf24A0A0A6YYL0 155 aa2.83□□□□□ -1.96
NUP54-206ENST00000508465 IGHV3OR16-9A0A0B4J2B5 98 aa2.83□□□□□ -1.96
NUP54-206ENST00000508465 A0A1W2PNN7 141 aa2.83□□□□□ -1.96
NUP54-206ENST00000508465 IGIPA6NJ69 53 aa2.83□□□□□ -1.96
NUP54-206ENST00000508465 A8MU10 97 aa2.83□□□□□ -1.96
NUP54-206ENST00000508465 S100PP25815 95 aa2.83□□□□□ -1.96
NUP54-206ENST00000508465 MRPS36P82909 103 aaKnown RBP2.83□□□□□ -1.96
NUP54-206ENST00000508465 SPAG11BQ08648 103 aa2.83□□□□□ -1.96
NUP54-206ENST00000508465 CIRBPQ14011 172 aaKnown RBP2.83□□□□□ -1.96
NUP54-206ENST00000508465 C6orf226Q5I0X4 101 aa2.83□□□□□ -1.96
NUP54-206ENST00000508465 LINC00242Q5T6M2 205 aa2.83□□□□□ -1.96
NUP54-206ENST00000508465 C2orf66Q6UXQ4 117 aa2.83□□□□□ -1.96
NUP54-206ENST00000508465 UNQ6190/PRO20217Q6UXQ8 127 aa2.83□□□□□ -1.96
NUP54-206ENST00000508465 ORAOV1Q8WV07 137 aa2.83□□□□□ -1.96
NUP54-206ENST00000508465 TMEM141Q96I45 108 aa2.83□□□□□ -1.96
NUP54-206ENST00000508465 CAMK2N2Q96S95 79 aa2.83□□□□□ -1.96
NUP54-206ENST00000508465 PLAC8Q9NZF1 115 aa2.83□□□□□ -1.96
NUP54-206ENST00000508465 PKHD1L1Q86WI1 4243 aa2.83□□□□□ -1.96
NUP54-206ENST00000508465 APOC3P02656 99 aa2.82□□□□□ -1.96
NUP54-206ENST00000508465 UBE2D1P51668 147 aa2.82□□□□□ -1.96
NUP54-206ENST00000508465 ORMDL2Q53FV1 153 aa2.82□□□□□ -1.96
NUP54-206ENST00000508465 C2orf82Q6UX34 121 aa2.82□□□□□ -1.96
NUP54-206ENST00000508465 LINC00173Q6ZV60 143 aa2.82□□□□□ -1.96
NUP54-206ENST00000508465 SLC7A5P1Q8MH63 180 aa2.82□□□□□ -1.96
NUP54-206ENST00000508465 LINC01561Q8N1V8 128 aa2.82□□□□□ -1.96
NUP54-206ENST00000508465 MTURNQ8N3F0 131 aa2.82□□□□□ -1.96
NUP54-206ENST00000508465 SCGB3A1Q96QR1 104 aa2.82□□□□□ -1.96
NUP54-206ENST00000508465 GNB1LQ9BYB4 327 aa2.82□□□□□ -1.96
NUP54-206ENST00000508465 NXT2Q9NPJ8 142 aaKnown RBP2.82□□□□□ -1.96
NUP54-206ENST00000508465 CYSLTR1Q9Y271 337 aa2.82□□□□□ -1.96
NUP54-206ENST00000508465 LAMTOR2Q9Y2Q5 125 aa2.82□□□□□ -1.96
NUP54-206ENST00000508465 CARHSP1Q9Y2V2 147 aaKnown RBP2.82□□□□□ -1.96
NUP54-206ENST00000508465 PYGO1Q9Y3Y4 419 aa2.82□□□□□ -1.96
NUP54-206ENST00000508465 FAT3Q8TDW7 4589 aa2.81□□□□□ -1.96
NUP54-206ENST00000508465 TRAV9-1A0A075B6T8 112 aa2.81□□□□□ -1.96
NUP54-206ENST00000508465 A0A087X002 238 aa2.81□□□□□ -1.96
NUP54-206ENST00000508465 LOC107984640A0A0U1RRK4 108 aa2.81□□□□□ -1.96
NUP54-206ENST00000508465 FAM168BA1KXE4 195 aa2.81□□□□□ -1.96
NUP54-206ENST00000508465 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.81□□□□□ -1.96
NUP54-206ENST00000508465 ATP5LO75964 103 aa2.81□□□□□ -1.96
NUP54-206ENST00000508465 APOMO95445 188 aa2.81□□□□□ -1.96
NUP54-206ENST00000508465 RPL18AQ02543 176 aaKnown RBP2.81□□□□□ -1.96
NUP54-206ENST00000508465 KIAA0087Q14695 138 aa2.81□□□□□ -1.96
NUP54-206ENST00000508465 RHEBQ15382 184 aa2.81□□□□□ -1.96
NUP54-206ENST00000508465 C9orf116Q5BN46 136 aaPredicted RBP2.81□□□□□ -1.96
NUP54-206ENST00000508465 Q6ZN92 141 aa2.81□□□□□ -1.96
NUP54-206ENST00000508465 TEX43Q6ZNM6 134 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms