RNA–Protein interactions for RNA: ENST00000507046.5

DDR1-259, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-259ENST00000507046 C6orf48Q9UBA6 75 aa12.59□□□□□ -0.39
DDR1-259ENST00000507046 SMIM1B2RUZ4 78 aa12.58□□□□□ -0.4
DDR1-259ENST00000507046 C2orf82Q6UX34 121 aa12.58□□□□□ -0.4
DDR1-259ENST00000507046 ABCA13Q86UQ4 5058 aa12.58□□□□□ -0.4
DDR1-259ENST00000507046 RPL37AP61513 92 aaKnown RBP12.57□□□□□ -0.4
DDR1-259ENST00000507046 SERF1AO75920 110 aa12.56□□□□□ -0.4
DDR1-259ENST00000507046 TLX1NBP0CAT3 122 aa12.56□□□□□ -0.4
DDR1-259ENST00000507046 CXCL5P42830 114 aa12.56□□□□□ -0.4
DDR1-259ENST00000507046 FAM19A2Q8N3H0 131 aa12.56□□□□□ -0.4
DDR1-259ENST00000507046 IFI27L1Q96BM0 104 aa12.56□□□□□ -0.4
DDR1-259ENST00000507046 PCLOQ9Y6V0 5065 aa12.56□□□□□ -0.4
DDR1-259ENST00000507046 SPINK8P0C7L1 97 aa12.55□□□□□ -0.4
DDR1-259ENST00000507046 C7orf33Q8WU49 177 aa12.55□□□□□ -0.4
DDR1-259ENST00000507046 COX7B2Q8TF08 81 aa12.54□□□□□ -0.4
DDR1-259ENST00000507046 VPS13BQ7Z7G8 4022 aa12.53□□□□□ -0.4
DDR1-259ENST00000507046 CHTOPQ9Y3Y2 248 aaKnown RBP12.53□□□□□ -0.4
DDR1-259ENST00000507046 TRAV12-1A0A0B4J245 112 aa12.52□□□□□ -0.41
DDR1-259ENST00000507046 F8VRH5 84 aa12.52□□□□□ -0.41
DDR1-259ENST00000507046 ZNF22P17026 224 aaPredicted RBP12.52□□□□□ -0.41
DDR1-259ENST00000507046 LINC00310P59036 64 aa12.52□□□□□ -0.41
DDR1-259ENST00000507046 NDUFC2-KCTD14E9PQ53 114 aa12.51□□□□□ -0.41
DDR1-259ENST00000507046 LEPROTL1O95214 131 aa12.51□□□□□ -0.41
DDR1-259ENST00000507046 Q6ZRP5 223 aa12.51□□□□□ -0.41
DDR1-259ENST00000507046 C11orf86A6NJI1 115 aa12.5□□□□□ -0.41
DDR1-259ENST00000507046 GAGE2EQ4V326 116 aa12.5□□□□□ -0.41
DDR1-259ENST00000507046 GAGE2DQ9UEU5 116 aa12.5□□□□□ -0.41
DDR1-259ENST00000507046 KRTAP10-4P60372 401 aaPredicted RBP12.49□□□□□ -0.41
DDR1-259ENST00000507046 C9orf116Q5BN46 136 aaPredicted RBP12.49□□□□□ -0.41
DDR1-259ENST00000507046 TMEM170BQ5T4T1 132 aa12.49□□□□□ -0.41
DDR1-259ENST00000507046 HSPB8Q9UJY1 196 aa12.48□□□□□ -0.41
DDR1-259ENST00000507046 IGLV5-39A0A0G2JS06 123 aa12.47□□□□□ -0.41
DDR1-259ENST00000507046 HIST1H2BKO60814 126 aa12.47□□□□□ -0.41
DDR1-259ENST00000507046 HIST1H2BJP06899 126 aa12.47□□□□□ -0.41
DDR1-259ENST00000507046 S100A1P23297 94 aa12.47□□□□□ -0.41
DDR1-259ENST00000507046 HIST1H2BOP23527 126 aa12.47□□□□□ -0.41
DDR1-259ENST00000507046 HIST1H2BBP33778 126 aa12.47□□□□□ -0.41
DDR1-259ENST00000507046 HIST1H2BDP58876 126 aa12.47□□□□□ -0.41
DDR1-259ENST00000507046 HIST1H2BCP62807 126 aa12.47□□□□□ -0.41
DDR1-259ENST00000507046 HIST2H2BEQ16778 126 aa12.47□□□□□ -0.41
DDR1-259ENST00000507046 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.47□□□□□ -0.41
DDR1-259ENST00000507046 HIST1H2BHQ93079 126 aa12.47□□□□□ -0.41
DDR1-259ENST00000507046 HIST1H2BNQ99877 126 aa12.47□□□□□ -0.41
DDR1-259ENST00000507046 HIST1H2BMQ99879 126 aa12.47□□□□□ -0.41
DDR1-259ENST00000507046 A0A1W2PNN7 141 aa12.46□□□□□ -0.41
DDR1-259ENST00000507046 H0Y8G0 127 aa12.46□□□□□ -0.41
DDR1-259ENST00000507046 NUPR1O60356 82 aa12.46□□□□□ -0.41
DDR1-259ENST00000507046 SRRM2Q9UQ35 2752 aaKnown RBP12.45□□□□□ -0.42
DDR1-259ENST00000507046 FABP4P15090 132 aa12.43□□□□□ -0.42
DDR1-259ENST00000507046 ATP6V1G1O75348 118 aa12.42□□□□□ -0.42
DDR1-259ENST00000507046 ODF1Q14990 250 aa12.42□□□□□ -0.42
DDR1-259ENST00000507046 FAM19A5Q7Z5A7 132 aaPredicted RBP12.42□□□□□ -0.42
DDR1-259ENST00000507046 FAM168BA1KXE4 195 aa12.41□□□□□ -0.42
DDR1-259ENST00000507046 SFTA2Q6UW10 78 aa12.41□□□□□ -0.42
DDR1-259ENST00000507046 TMEM223A0PJW6 202 aa12.4□□□□□ -0.42
DDR1-259ENST00000507046 PRR3P79522 188 aaKnown RBP12.4□□□□□ -0.42
DDR1-259ENST00000507046 C9orf129Q5T035 196 aaKnown RBP12.4□□□□□ -0.42
DDR1-259ENST00000507046 MAP1LC3CQ9BXW4 147 aa12.39□□□□□ -0.43
DDR1-259ENST00000507046 PLNP26678 52 aa12.38□□□□□ -0.43
DDR1-259ENST00000507046 PHF5AQ7RTV0 110 aaKnown RBP12.38□□□□□ -0.43
DDR1-259ENST00000507046 XAGE1AQ9HD64 81 aa12.38□□□□□ -0.43
DDR1-259ENST00000507046 M0QXV9 152 aa12.37□□□□□ -0.43
DDR1-259ENST00000507046 HNRNPA3P51991 378 aaKnown RBP12.36□□□□□ -0.43
DDR1-259ENST00000507046 FLG2Q5D862 2391 aaPredicted RBP12.35□□□□□ -0.43
DDR1-259ENST00000507046 DPM2O94777 84 aa12.34□□□□□ -0.43
DDR1-259ENST00000507046 ERG28Q9UKR5 140 aa12.34□□□□□ -0.43
DDR1-259ENST00000507046 PFN2P35080 140 aa12.33□□□□□ -0.44
DDR1-259ENST00000507046 COA6Q5JTJ3 125 aaKnown RBP12.33□□□□□ -0.44
DDR1-259ENST00000507046 KRTAP7-1Q8IUC3 87 aa12.33□□□□□ -0.44
DDR1-259ENST00000507046 IGKCP01834 107 aa12.32□□□□□ -0.44
DDR1-259ENST00000507046 UBE2BP63146 152 aa12.32□□□□□ -0.44
DDR1-259ENST00000507046 COX17Q14061 63 aa12.32□□□□□ -0.44
DDR1-259ENST00000507046 ZNF625Q96I27 306 aaPredicted RBP12.32□□□□□ -0.44
DDR1-259ENST00000507046 PMCHL2Q9BQD1 86 aa12.32□□□□□ -0.44
DDR1-259ENST00000507046 HERVK_113P61574 105 aa12.31□□□□□ -0.44
DDR1-259ENST00000507046 SERTAD4-AS1Q5TG53 156 aa12.31□□□□□ -0.44
DDR1-259ENST00000507046 PSORS1C2Q9UIG4 136 aa12.31□□□□□ -0.44
DDR1-259ENST00000507046 SYS1-DBNDD2H3BUS1 97 aa12.29□□□□□ -0.44
DDR1-259ENST00000507046 KRTAP29-1A8MX34 341 aaPredicted RBP12.28□□□□□ -0.44
DDR1-259ENST00000507046 J3QL48 77 aa12.28□□□□□ -0.44
DDR1-259ENST00000507046 LBHQ53QV2 105 aaPredicted RBP12.28□□□□□ -0.44
DDR1-259ENST00000507046 C1orf137Q5JT78 98 aa12.28□□□□□ -0.44
DDR1-259ENST00000507046 C22orf24Q9Y442 160 aa12.28□□□□□ -0.44
DDR1-259ENST00000507046 MYCBP2O75592 4640 aa12.28□□□□□ -0.44
DDR1-259ENST00000507046 LEPROTO15243 131 aa12.27□□□□□ -0.45
DDR1-259ENST00000507046 OXTP01178 125 aa12.27□□□□□ -0.45
DDR1-259ENST00000507046 HERV-K104P63124 156 aa12.27□□□□□ -0.45
DDR1-259ENST00000507046 PLEKHB2Q96CS7 222 aa12.27□□□□□ -0.45
DDR1-259ENST00000507046 TP73-AS1Q9UF72 201 aa12.27□□□□□ -0.45
DDR1-259ENST00000507046 NDUFA12Q9UI09 145 aa12.27□□□□□ -0.45
DDR1-259ENST00000507046 PLA2G2DQ9UNK4 145 aa12.27□□□□□ -0.45
DDR1-259ENST00000507046 PET117Q6UWS5 81 aa12.26□□□□□ -0.45
DDR1-259ENST00000507046 PKHD1L1Q86WI1 4243 aa12.26□□□□□ -0.45
DDR1-259ENST00000507046 MYMXA0A1B0GTQ4 84 aa12.25□□□□□ -0.45
DDR1-259ENST00000507046 LINC00158P58513 81 aa12.25□□□□□ -0.45
DDR1-259ENST00000507046 MEIG1Q5JSS6 88 aa12.25□□□□□ -0.45
DDR1-259ENST00000507046 SPINK6Q6UWN8 80 aa12.25□□□□□ -0.45
DDR1-259ENST00000507046 MRPL55Q7Z7F7 128 aaKnown RBP12.25□□□□□ -0.45
DDR1-259ENST00000507046 NKAPP1Q8N9T2 125 aa12.25□□□□□ -0.45
DDR1-259ENST00000507046 SND1-IT1Q9HBX3 110 aa12.25□□□□□ -0.45
DDR1-259ENST00000507046 LINC00587B1AMM8 73 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms