RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 IFI27L1Q96BM0 104 aa11.54□□□□□ -0.56
NPHP4-210ENST00000506941 TOMM7Q9P0U1 55 aa11.54□□□□□ -0.56
NPHP4-210ENST00000506941 C6orf48Q9UBA6 75 aa11.54□□□□□ -0.56
NPHP4-210ENST00000506941 A0A087WYN8 130 aa11.53□□□□□ -0.56
NPHP4-210ENST00000506941 LOC107984640A0A0U1RRK4 108 aa11.53□□□□□ -0.56
NPHP4-210ENST00000506941 Q8IZM0 81 aa11.53□□□□□ -0.56
NPHP4-210ENST00000506941 LINC00528Q8N1L1 170 aa11.53□□□□□ -0.56
NPHP4-210ENST00000506941 PACRGQ96M98 296 aaPredicted RBP11.53□□□□□ -0.56
NPHP4-210ENST00000506941 SPINK8P0C7L1 97 aa11.52□□□□□ -0.57
NPHP4-210ENST00000506941 MAJINQ3KP22 176 aa11.52□□□□□ -0.57
NPHP4-210ENST00000506941 C11orf86A6NJI1 115 aa11.51□□□□□ -0.57
NPHP4-210ENST00000506941 ZNF22P17026 224 aaPredicted RBP11.51□□□□□ -0.57
NPHP4-210ENST00000506941 PTTG1IPP53801 180 aa11.51□□□□□ -0.57
NPHP4-210ENST00000506941 PKIGQ9Y2B9 76 aa11.51□□□□□ -0.57
NPHP4-210ENST00000506941 TRAV12-1A0A0B4J245 112 aa11.5□□□□□ -0.57
NPHP4-210ENST00000506941 PRSS2P07478 247 aa11.5□□□□□ -0.57
NPHP4-210ENST00000506941 GAGE2BQ13066 116 aa11.5□□□□□ -0.57
NPHP4-210ENST00000506941 DPH3Q96FX2 82 aa11.5□□□□□ -0.57
NPHP4-210ENST00000506941 PLAC8Q9NZF1 115 aa11.5□□□□□ -0.57
NPHP4-210ENST00000506941 CHTOPQ9Y3Y2 248 aaKnown RBP11.5□□□□□ -0.57
NPHP4-210ENST00000506941 FAM229AH3BQW9 127 aa11.49□□□□□ -0.57
NPHP4-210ENST00000506941 LEPROTL1O95214 131 aa11.49□□□□□ -0.57
NPHP4-210ENST00000506941 RPL18AQ02543 176 aaKnown RBP11.49□□□□□ -0.57
NPHP4-210ENST00000506941 C6orf226Q5I0X4 101 aa11.49□□□□□ -0.57
NPHP4-210ENST00000506941 TRBV30A0A0K0K1B3 111 aa11.48□□□□□ -0.57
NPHP4-210ENST00000506941 H3BRM9 83 aa11.48□□□□□ -0.57
NPHP4-210ENST00000506941 C9orf116Q5BN46 136 aaPredicted RBP11.48□□□□□ -0.57
NPHP4-210ENST00000506941 STPG4Q8N801 248 aa11.48□□□□□ -0.57
NPHP4-210ENST00000506941 COX7B2Q8TF08 81 aa11.48□□□□□ -0.57
NPHP4-210ENST00000506941 LINC00474Q9P2X8 69 aa11.48□□□□□ -0.57
NPHP4-210ENST00000506941 PKHD1L1Q86WI1 4243 aa11.47□□□□□ -0.57
NPHP4-210ENST00000506941 IGLV5-39A0A0G2JS06 123 aa11.47□□□□□ -0.57
NPHP4-210ENST00000506941 TLX1NBP0CAT3 122 aa11.47□□□□□ -0.57
NPHP4-210ENST00000506941 CKS1BP61024 79 aa11.47□□□□□ -0.57
NPHP4-210ENST00000506941 FABP4P15090 132 aa11.46□□□□□ -0.57
NPHP4-210ENST00000506941 Q6ZRP5 223 aa11.46□□□□□ -0.57
NPHP4-210ENST00000506941 F8VRH5 84 aa11.45□□□□□ -0.58
NPHP4-210ENST00000506941 H0Y8G0 127 aa11.45□□□□□ -0.58
NPHP4-210ENST00000506941 KRTAP10-4P60372 401 aaPredicted RBP11.45□□□□□ -0.58
NPHP4-210ENST00000506941 ODF1Q14990 250 aa11.45□□□□□ -0.58
NPHP4-210ENST00000506941 TMEM170BQ5T4T1 132 aa11.44□□□□□ -0.58
NPHP4-210ENST00000506941 HSPB8Q9UJY1 196 aa11.44□□□□□ -0.58
NPHP4-210ENST00000506941 CXCL5P42830 114 aa11.43□□□□□ -0.58
NPHP4-210ENST00000506941 A0A1W2PNN7 141 aa11.42□□□□□ -0.58
NPHP4-210ENST00000506941 NDUFC2-KCTD14E9PQ53 114 aa11.42□□□□□ -0.58
NPHP4-210ENST00000506941 PLA2G1BP04054 148 aaKnown RBP11.42□□□□□ -0.58
NPHP4-210ENST00000506941 GAGE2EQ4V326 116 aa11.41□□□□□ -0.58
NPHP4-210ENST00000506941 COA6Q5JTJ3 125 aaKnown RBP11.41□□□□□ -0.58
NPHP4-210ENST00000506941 GAGE2DQ9UEU5 116 aa11.41□□□□□ -0.58
NPHP4-210ENST00000506941 TMEM223A0PJW6 202 aa11.4□□□□□ -0.58
NPHP4-210ENST00000506941 FAM168BA1KXE4 195 aa11.39□□□□□ -0.59
NPHP4-210ENST00000506941 RPL37AP61513 92 aaKnown RBP11.39□□□□□ -0.59
NPHP4-210ENST00000506941 C9orf129Q5T035 196 aaKnown RBP11.38□□□□□ -0.59
NPHP4-210ENST00000506941 PMCHL2Q9BQD1 86 aa11.38□□□□□ -0.59
NPHP4-210ENST00000506941 MYCBP2O75592 4640 aa11.38□□□□□ -0.59
NPHP4-210ENST00000506941 FLG2Q5D862 2391 aaPredicted RBP11.38□□□□□ -0.59
NPHP4-210ENST00000506941 INAFM2P0DMQ5 153 aa11.37□□□□□ -0.59
NPHP4-210ENST00000506941 KRTAP7-1Q8IUC3 87 aa11.36□□□□□ -0.59
NPHP4-210ENST00000506941 MAP1LC3CQ9BXW4 147 aa11.36□□□□□ -0.59
NPHP4-210ENST00000506941 C7orf33Q8WU49 177 aa11.35□□□□□ -0.59
NPHP4-210ENST00000506941 DPM2O94777 84 aa11.34□□□□□ -0.59
NPHP4-210ENST00000506941 PLNP26678 52 aa11.34□□□□□ -0.59
NPHP4-210ENST00000506941 ZNF625Q96I27 306 aaPredicted RBP11.34□□□□□ -0.59
NPHP4-210ENST00000506941 SYS1-DBNDD2H3BUS1 97 aa11.33□□□□□ -0.6
NPHP4-210ENST00000506941 FAM19A5Q7Z5A7 132 aaPredicted RBP11.33□□□□□ -0.6
NPHP4-210ENST00000506941 XAGE1AQ9HD64 81 aa11.33□□□□□ -0.6
NPHP4-210ENST00000506941 IGKCP01834 107 aa11.32□□□□□ -0.6
NPHP4-210ENST00000506941 HNRNPA3P51991 378 aaKnown RBP11.32□□□□□ -0.6
NPHP4-210ENST00000506941 PHF5AQ7RTV0 110 aaKnown RBP11.32□□□□□ -0.6
NPHP4-210ENST00000506941 PRR3P79522 188 aaKnown RBP11.3□□□□□ -0.6
NPHP4-210ENST00000506941 SERTAD4-AS1Q5TG53 156 aa11.3□□□□□ -0.6
NPHP4-210ENST00000506941 C3orf79P0CE67 100 aa11.29□□□□□ -0.6
NPHP4-210ENST00000506941 PFN2P35080 140 aa11.29□□□□□ -0.6
NPHP4-210ENST00000506941 TSPEAR-AS2P59090 65 aa11.29□□□□□ -0.6
NPHP4-210ENST00000506941 ERG28Q9UKR5 140 aa11.29□□□□□ -0.6
NPHP4-210ENST00000506941 FAT3Q8TDW7 4589 aa11.28□□□□□ -0.6
NPHP4-210ENST00000506941 LINC01545Q5VT33 79 aa11.28□□□□□ -0.6
NPHP4-210ENST00000506941 SFTA2Q6UW10 78 aa11.28□□□□□ -0.6
NPHP4-210ENST00000506941 LRP1Q07954 4544 aaKnown RBP11.28□□□□□ -0.6
NPHP4-210ENST00000506941 M0QXV9 152 aa11.27□□□□□ -0.61
NPHP4-210ENST00000506941 PET117Q6UWS5 81 aa11.27□□□□□ -0.61
NPHP4-210ENST00000506941 KRTAP11-1Q8IUC1 163 aa11.27□□□□□ -0.61
NPHP4-210ENST00000506941 LEPROTO15243 131 aa11.26□□□□□ -0.61
NPHP4-210ENST00000506941 KRTDAPP60985 99 aa11.25□□□□□ -0.61
NPHP4-210ENST00000506941 COX17Q14061 63 aa11.25□□□□□ -0.61
NPHP4-210ENST00000506941 NDUFA12Q9UI09 145 aa11.25□□□□□ -0.61
NPHP4-210ENST00000506941 HERVK_113P61574 105 aa11.24□□□□□ -0.61
NPHP4-210ENST00000506941 HIST3H2BBQ8N257 126 aa11.24□□□□□ -0.61
NPHP4-210ENST00000506941 PLEKHB2Q96CS7 222 aa11.24□□□□□ -0.61
NPHP4-210ENST00000506941 PSORS1C2Q9UIG4 136 aa11.24□□□□□ -0.61
NPHP4-210ENST00000506941 J3QQQ9 107 aa11.23□□□□□ -0.61
NPHP4-210ENST00000506941 SND1-IT1Q9HBX3 110 aa11.23□□□□□ -0.61
NPHP4-210ENST00000506941 C22orf24Q9Y442 160 aa11.23□□□□□ -0.61
NPHP4-210ENST00000506941 PLA2G2DQ9UNK4 145 aa11.22□□□□□ -0.61
NPHP4-210ENST00000506941 A0A0U1RRA0 63 aa11.21□□□□□ -0.61
NPHP4-210ENST00000506941 HERV-K104P63124 156 aa11.21□□□□□ -0.61
NPHP4-210ENST00000506941 MYMXA0A1B0GTQ4 84 aa11.2□□□□□ -0.62
NPHP4-210ENST00000506941 E9PLD3 99 aa11.2□□□□□ -0.62
NPHP4-210ENST00000506941 SMIM13P0DJ93 91 aa11.2□□□□□ -0.62
NPHP4-210ENST00000506941 LINC00158P58513 81 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms