RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 CDKN2A-AS1Q9UH64 79 aa5.49□□□□□ -1.53
PDGFC-205ENST00000506880 A0A0J9YXV3 536 aa5.48□□□□□ -1.53
PDGFC-205ENST00000506880 LOC107984640A0A0U1RRK4 108 aa5.48□□□□□ -1.53
PDGFC-205ENST00000506880 C20orf202A1L168 122 aa5.48□□□□□ -1.53
PDGFC-205ENST00000506880 SMIM1B2RUZ4 78 aa5.48□□□□□ -1.53
PDGFC-205ENST00000506880 DPM2O94777 84 aa5.48□□□□□ -1.53
PDGFC-205ENST00000506880 CKS1BP61024 79 aa5.48□□□□□ -1.53
PDGFC-205ENST00000506880 HERVK_113P61574 105 aa5.48□□□□□ -1.53
PDGFC-205ENST00000506880 COX6A2Q02221 97 aa5.48□□□□□ -1.53
PDGFC-205ENST00000506880 KIAA0087Q14695 138 aa5.48□□□□□ -1.53
PDGFC-205ENST00000506880 C6orf226Q5I0X4 101 aa5.48□□□□□ -1.53
PDGFC-205ENST00000506880 SDIM1Q6ZPB5 146 aa5.48□□□□□ -1.53
PDGFC-205ENST00000506880 FAM19A2Q8N3H0 131 aa5.48□□□□□ -1.53
PDGFC-205ENST00000506880 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.47□□□□□ -1.53
PDGFC-205ENST00000506880 LECT2O14960 151 aa5.47□□□□□ -1.53
PDGFC-205ENST00000506880 ZNF22P17026 224 aaPredicted RBP5.47□□□□□ -1.53
PDGFC-205ENST00000506880 NMUP48645 174 aa5.47□□□□□ -1.53
PDGFC-205ENST00000506880 NDUFA6P56556 154 aa5.47□□□□□ -1.53
PDGFC-205ENST00000506880 HERV-K104P63124 156 aa5.47□□□□□ -1.53
PDGFC-205ENST00000506880 PMCHL1Q16048 86 aa5.47□□□□□ -1.53
PDGFC-205ENST00000506880 DNAH11Q96DT5 4516 aa5.47□□□□□ -1.53
PDGFC-205ENST00000506880 EPM2AB3EWF7 344 aa5.46□□□□□ -1.54
PDGFC-205ENST00000506880 SYS1-DBNDD2H3BUS1 97 aa5.46□□□□□ -1.54
PDGFC-205ENST00000506880 S100A2P29034 98 aa5.46□□□□□ -1.54
PDGFC-205ENST00000506880 LINC01545Q5VT33 79 aa5.46□□□□□ -1.54
PDGFC-205ENST00000506880 COX7B2Q8TF08 81 aa5.46□□□□□ -1.54
PDGFC-205ENST00000506880 PLEKHB2Q96CS7 222 aa5.46□□□□□ -1.54
PDGFC-205ENST00000506880 TMEM223A0PJW6 202 aa5.45□□□□□ -1.54
PDGFC-205ENST00000506880 NDUFC2-KCTD14E9PQ53 114 aa5.45□□□□□ -1.54
PDGFC-205ENST00000506880 NUPR1O60356 82 aa5.45□□□□□ -1.54
PDGFC-205ENST00000506880 IGKCP01834 107 aa5.45□□□□□ -1.54
PDGFC-205ENST00000506880 HIGD2BQ4VC39 106 aa5.45□□□□□ -1.54
PDGFC-205ENST00000506880 TMEM170BQ5T4T1 132 aa5.45□□□□□ -1.54
PDGFC-205ENST00000506880 KRTAP4-9Q9BYQ8 210 aa5.45□□□□□ -1.54
PDGFC-205ENST00000506880 SLPIP03973 132 aa5.44□□□□□ -1.54
PDGFC-205ENST00000506880 FABP4P15090 132 aa5.44□□□□□ -1.54
PDGFC-205ENST00000506880 KRTAP10-1P60331 282 aa5.44□□□□□ -1.54
PDGFC-205ENST00000506880 KRTAP5-3Q6L8H2 238 aa5.44□□□□□ -1.54
PDGFC-205ENST00000506880 Q6ZRU5 148 aa5.44□□□□□ -1.54
PDGFC-205ENST00000506880 PLAC8Q9NZF1 115 aa5.44□□□□□ -1.54
PDGFC-205ENST00000506880 PTTG1IPP53801 180 aa5.43□□□□□ -1.54
PDGFC-205ENST00000506880 ZC2HC1BQ5TFG8 222 aa5.43□□□□□ -1.54
PDGFC-205ENST00000506880 HIST3H2BBQ8N257 126 aa5.43□□□□□ -1.54
PDGFC-205ENST00000506880 SPACA4Q8TDM5 124 aa5.43□□□□□ -1.54
PDGFC-205ENST00000506880 MYMXA0A1B0GTQ4 84 aa5.42□□□□□ -1.54
PDGFC-205ENST00000506880 C5orf52A6NGY3 159 aa5.42□□□□□ -1.54
PDGFC-205ENST00000506880 E9PLD3 99 aa5.42□□□□□ -1.54
PDGFC-205ENST00000506880 LEPROTO15243 131 aa5.42□□□□□ -1.54
PDGFC-205ENST00000506880 PLA2G2DQ9UNK4 145 aa5.42□□□□□ -1.54
PDGFC-205ENST00000506880 LRP1BQ9NZR2 4599 aa5.41□□□□□ -1.54
PDGFC-205ENST00000506880 SPINK8P0C7L1 97 aa5.41□□□□□ -1.54
PDGFC-205ENST00000506880 C3orf79P0CE67 100 aa5.41□□□□□ -1.54
PDGFC-205ENST00000506880 UNQ6190/PRO20217Q6UXQ8 127 aa5.41□□□□□ -1.54
PDGFC-205ENST00000506880 KRTAP19-1Q8IUB9 90 aa5.41□□□□□ -1.54
PDGFC-205ENST00000506880 ZNF625Q96I27 306 aaPredicted RBP5.41□□□□□ -1.54
PDGFC-205ENST00000506880 HIST1H2BLQ99880 126 aa5.41□□□□□ -1.54
PDGFC-205ENST00000506880 PPDPFQ9H3Y8 114 aa5.41□□□□□ -1.54
PDGFC-205ENST00000506880 TOMM7Q9P0U1 55 aa5.41□□□□□ -1.54
PDGFC-205ENST00000506880 C6orf48Q9UBA6 75 aa5.41□□□□□ -1.54
PDGFC-205ENST00000506880 TP73-AS1Q9UF72 201 aa5.41□□□□□ -1.54
PDGFC-205ENST00000506880 DNAH5Q8TE73 4624 aa5.41□□□□□ -1.54
PDGFC-205ENST00000506880 XGP55808 180 aa5.4□□□□□ -1.54
PDGFC-205ENST00000506880 COPS9Q8WXC6 57 aa5.4□□□□□ -1.54
PDGFC-205ENST00000506880 DYNC1H1Q14204 4646 aaKnown RBP5.4□□□□□ -1.55
PDGFC-205ENST00000506880 PCLOQ9Y6V0 5065 aa5.39□□□□□ -1.55
PDGFC-205ENST00000506880 FAM229AH3BQW9 127 aa5.39□□□□□ -1.55
PDGFC-205ENST00000506880 J3QQQ9 107 aa5.39□□□□□ -1.55
PDGFC-205ENST00000506880 TIMM17BO60830 172 aa5.39□□□□□ -1.55
PDGFC-205ENST00000506880 PLA2G1BP04054 148 aaKnown RBP5.39□□□□□ -1.55
PDGFC-205ENST00000506880 Q8N1X5 172 aa5.39□□□□□ -1.55
PDGFC-205ENST00000506880 C7orf33Q8WU49 177 aa5.39□□□□□ -1.55
PDGFC-205ENST00000506880 NDUFA12Q9UI09 145 aa5.39□□□□□ -1.55
PDGFC-205ENST00000506880 A0A096LNI7 61 aa5.38□□□□□ -1.55
PDGFC-205ENST00000506880 LOC107984156A0A0G2JMH3 177 aa5.38□□□□□ -1.55
PDGFC-205ENST00000506880 HSBP1L1C9JCN9 74 aa5.38□□□□□ -1.55
PDGFC-205ENST00000506880 LGALS3P17931 250 aaKnown RBP5.38□□□□□ -1.55
PDGFC-205ENST00000506880 KRTDAPP60985 99 aa5.38□□□□□ -1.55
PDGFC-205ENST00000506880 RPL18AQ02543 176 aaKnown RBP5.38□□□□□ -1.55
PDGFC-205ENST00000506880 LBHQ53QV2 105 aaPredicted RBP5.38□□□□□ -1.55
PDGFC-205ENST00000506880 C2orf82Q6UX34 121 aa5.38□□□□□ -1.55
PDGFC-205ENST00000506880 Q6ZVH6 145 aa5.38□□□□□ -1.55
PDGFC-205ENST00000506880 SCXQ7RTU7 201 aa5.38□□□□□ -1.55
PDGFC-205ENST00000506880 ARL17AQ8IVW1 177 aa5.38□□□□□ -1.55
PDGFC-205ENST00000506880 CIRBP-AS1Q8TBR5 109 aa5.38□□□□□ -1.55
PDGFC-205ENST00000506880 KRTAP9-8Q9BYQ0 159 aa5.38□□□□□ -1.55
PDGFC-205ENST00000506880 ERG28Q9UKR5 140 aa5.38□□□□□ -1.55
PDGFC-205ENST00000506880 IGLV5-37A0A075B6J1 123 aa5.37□□□□□ -1.55
PDGFC-205ENST00000506880 A0A087WYN8 130 aa5.37□□□□□ -1.55
PDGFC-205ENST00000506880 A0A0J9YXY3 114 aa5.37□□□□□ -1.55
PDGFC-205ENST00000506880 H0Y8G0 127 aa5.37□□□□□ -1.55
PDGFC-205ENST00000506880 RPL24P83731 157 aaKnown RBP5.37□□□□□ -1.55
PDGFC-205ENST00000506880 MAJINQ3KP22 176 aa5.37□□□□□ -1.55
PDGFC-205ENST00000506880 C10orf25Q5T742 122 aa5.37□□□□□ -1.55
PDGFC-205ENST00000506880 Q6ZRP5 223 aa5.37□□□□□ -1.55
PDGFC-205ENST00000506880 LINC00526Q96FQ7 95 aa5.37□□□□□ -1.55
PDGFC-205ENST00000506880 DPH3Q96FX2 82 aa5.37□□□□□ -1.55
PDGFC-205ENST00000506880 CBY1Q9Y3M2 126 aa5.37□□□□□ -1.55
PDGFC-205ENST00000506880 IGKV2D-26A0A0A0MRZ7 120 aa5.36□□□□□ -1.55
PDGFC-205ENST00000506880 GAGE2BQ13066 116 aa5.36□□□□□ -1.55
PDGFC-205ENST00000506880 STPG4Q8N801 248 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms