RNA–Protein interactions for RNA: ENST00000505944.5

NR1I3-221, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 865 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-221ENST00000505944 SMAGPQ0VAQ4 97 aa4.44□□□□□ -1.7
NR1I3-221ENST00000505944 LINC00469Q8N7U9 141 aa4.44□□□□□ -1.7
NR1I3-221ENST00000505944 IFI27L1Q96BM0 104 aa4.44□□□□□ -1.7
NR1I3-221ENST00000505944 C2orf88Q9BSF0 95 aa4.44□□□□□ -1.7
NR1I3-221ENST00000505944 CSDC2Q9Y534 153 aaKnown RBP4.44□□□□□ -1.7
NR1I3-221ENST00000505944 IGLV4-69A0A075B6H9 119 aa4.43□□□□□ -1.7
NR1I3-221ENST00000505944 TRAV8-4A0A0B4J246 113 aa4.43□□□□□ -1.7
NR1I3-221ENST00000505944 hDV102S1A0JD36 115 aa4.43□□□□□ -1.7
NR1I3-221ENST00000505944 COX7A2LO14548 114 aa4.43□□□□□ -1.7
NR1I3-221ENST00000505944 LEPROTL1O95214 131 aa4.43□□□□□ -1.7
NR1I3-221ENST00000505944 SPINK8P0C7L1 97 aa4.43□□□□□ -1.7
NR1I3-221ENST00000505944 MALP21145 153 aa4.43□□□□□ -1.7
NR1I3-221ENST00000505944 SNRPEP62304 92 aaKnown RBP4.43□□□□□ -1.7
NR1I3-221ENST00000505944 PMVKQ15126 192 aa4.43□□□□□ -1.7
NR1I3-221ENST00000505944 CD164L2Q6UWJ8 174 aa4.43□□□□□ -1.7
NR1I3-221ENST00000505944 CHAC1Q9BUX1 264 aa4.43□□□□□ -1.7
NR1I3-221ENST00000505944 CDKN2A-AS1Q9UH64 79 aa4.43□□□□□ -1.7
NR1I3-221ENST00000505944 C11orf86A6NJI1 115 aa4.42□□□□□ -1.7
NR1I3-221ENST00000505944 ATP5LO75964 103 aa4.42□□□□□ -1.7
NR1I3-221ENST00000505944 SLPIP03973 132 aa4.42□□□□□ -1.7
NR1I3-221ENST00000505944 KRTDAPP60985 99 aa4.42□□□□□ -1.7
NR1I3-221ENST00000505944 SCXQ7RTU7 201 aa4.42□□□□□ -1.7
NR1I3-221ENST00000505944 HIST3H2BBQ8N257 126 aa4.42□□□□□ -1.7
NR1I3-221ENST00000505944 ORAOV1Q8WV07 137 aa4.42□□□□□ -1.7
NR1I3-221ENST00000505944 GEMIN7Q9H840 131 aaKnown RBP4.42□□□□□ -1.7
NR1I3-221ENST00000505944 MRPL35Q9NZE8 188 aaKnown RBP4.42□□□□□ -1.7
NR1I3-221ENST00000505944 CHTOPQ9Y3Y2 248 aaKnown RBP4.42□□□□□ -1.7
NR1I3-221ENST00000505944 IGHV3OR16-9A0A0B4J2B5 98 aa4.41□□□□□ -1.7
NR1I3-221ENST00000505944 ZNF22P17026 224 aaPredicted RBP4.41□□□□□ -1.7
NR1I3-221ENST00000505944 G0S2P27469 103 aa4.41□□□□□ -1.7
NR1I3-221ENST00000505944 SPAG11BQ08648 103 aa4.41□□□□□ -1.7
NR1I3-221ENST00000505944 COA6Q5JTJ3 125 aaKnown RBP4.41□□□□□ -1.7
NR1I3-221ENST00000505944 LCE4AQ5TA78 99 aa4.41□□□□□ -1.7
NR1I3-221ENST00000505944 C2orf82Q6UX34 121 aa4.41□□□□□ -1.7
NR1I3-221ENST00000505944 TOMM7Q9P0U1 55 aa4.41□□□□□ -1.7
NR1I3-221ENST00000505944 RNF213Q63HN8 5207 aa4.41□□□□□ -1.7
NR1I3-221ENST00000505944 TINCRA0A1B0GVN0 87 aa4.4□□□□□ -1.71
NR1I3-221ENST00000505944 C9orf118A6NHY6 69 aa4.4□□□□□ -1.71
NR1I3-221ENST00000505944 S100A6P06703 90 aa4.4□□□□□ -1.71
NR1I3-221ENST00000505944 C3orf79P0CE67 100 aa4.4□□□□□ -1.71
NR1I3-221ENST00000505944 IGLC3P0DOY3 106 aa4.4□□□□□ -1.71
NR1I3-221ENST00000505944 KRTAP10-4P60372 401 aaPredicted RBP4.4□□□□□ -1.71
NR1I3-221ENST00000505944 C14orf177Q52M58 125 aa4.4□□□□□ -1.71
NR1I3-221ENST00000505944 PAPPA-AS1Q5QFB9 102 aa4.4□□□□□ -1.71
NR1I3-221ENST00000505944 TMEM170BQ5T4T1 132 aa4.4□□□□□ -1.71
NR1I3-221ENST00000505944 C10orf25Q5T742 122 aa4.4□□□□□ -1.71
NR1I3-221ENST00000505944 Q6ZRU5 148 aa4.4□□□□□ -1.71
NR1I3-221ENST00000505944 ATOH7Q8N100 152 aa4.4□□□□□ -1.71
NR1I3-221ENST00000505944 HIST1H2BLQ99880 126 aa4.4□□□□□ -1.71
NR1I3-221ENST00000505944 HSPB8Q9UJY1 196 aa4.4□□□□□ -1.71
NR1I3-221ENST00000505944 TNXBP22105 4242 aa4.39□□□□□ -1.71
NR1I3-221ENST00000505944 A0A087WZ39 114 aa4.39□□□□□ -1.71
NR1I3-221ENST00000505944 IGHV1-58A0A0C4DH39 117 aa4.39□□□□□ -1.71
NR1I3-221ENST00000505944 SMIM1B2RUZ4 78 aa4.39□□□□□ -1.71
NR1I3-221ENST00000505944 NPSP0C0P6 89 aa4.39□□□□□ -1.71
NR1I3-221ENST00000505944 RPL37AP61513 92 aaKnown RBP4.39□□□□□ -1.71
NR1I3-221ENST00000505944 C9orf116Q5BN46 136 aaPredicted RBP4.39□□□□□ -1.71
NR1I3-221ENST00000505944 MAP1LC3CQ9BXW4 147 aa4.39□□□□□ -1.71
NR1I3-221ENST00000505944 LRP2P98164 4655 aa4.39□□□□□ -1.71
NR1I3-221ENST00000505944 GVQW2A0A096LPI5 108 aaPredicted RBP4.38□□□□□ -1.71
NR1I3-221ENST00000505944 SYS1-DBNDD2H3BUS1 97 aa4.38□□□□□ -1.71
NR1I3-221ENST00000505944 PANO1I0J062 215 aa4.38□□□□□ -1.71
NR1I3-221ENST00000505944 CHTF8P0CG12 524 aa4.38□□□□□ -1.71
NR1I3-221ENST00000505944 S100A2P29034 98 aa4.38□□□□□ -1.71
NR1I3-221ENST00000505944 HERVK_113P63121 156 aa4.38□□□□□ -1.71
NR1I3-221ENST00000505944 UNQ6190/PRO20217Q6UXQ8 127 aa4.38□□□□□ -1.71
NR1I3-221ENST00000505944 CIRBP-AS1Q8TBR5 109 aa4.38□□□□□ -1.71
NR1I3-221ENST00000505944 PACRGQ96M98 296 aaPredicted RBP4.38□□□□□ -1.71
NR1I3-221ENST00000505944 TRAV12-1A0A0B4J245 112 aa4.37□□□□□ -1.71
NR1I3-221ENST00000505944 LINC01549A6NIU2 74 aa4.37□□□□□ -1.71
NR1I3-221ENST00000505944 F8VRH5 84 aa4.37□□□□□ -1.71
NR1I3-221ENST00000505944 TSPEAR-AS2P59090 65 aa4.37□□□□□ -1.71
NR1I3-221ENST00000505944 KIAA0087Q14695 138 aa4.37□□□□□ -1.71
NR1I3-221ENST00000505944 FAM19A3Q7Z5A8 133 aa4.37□□□□□ -1.71
NR1I3-221ENST00000505944 CARD19Q96LW7 228 aa4.37□□□□□ -1.71
NR1I3-221ENST00000505944 CAMK2N2Q96S95 79 aa4.37□□□□□ -1.71
NR1I3-221ENST00000505944 IGLV5-45A0A087WSX0 123 aa4.36□□□□□ -1.71
NR1I3-221ENST00000505944 IGKV2-24A0A0C4DH68 120 aa4.36□□□□□ -1.71
NR1I3-221ENST00000505944 C5orf52A6NGY3 159 aa4.36□□□□□ -1.71
NR1I3-221ENST00000505944 H3BRM9 83 aa4.36□□□□□ -1.71
NR1I3-221ENST00000505944 DPM2O94777 84 aa4.36□□□□□ -1.71
NR1I3-221ENST00000505944 APOMO95445 188 aa4.36□□□□□ -1.71
NR1I3-221ENST00000505944 IGKCP01834 107 aa4.36□□□□□ -1.71
NR1I3-221ENST00000505944 RPL18AQ02543 176 aaKnown RBP4.36□□□□□ -1.71
NR1I3-221ENST00000505944 SYCNQ0VAF6 134 aa4.36□□□□□ -1.71
NR1I3-221ENST00000505944 STPG4Q8N801 248 aa4.36□□□□□ -1.71
NR1I3-221ENST00000505944 OR10D4PQ8NGN7 298 aa4.36□□□□□ -1.71
NR1I3-221ENST00000505944 COX7B2Q8TF08 81 aa4.36□□□□□ -1.71
NR1I3-221ENST00000505944 ZNF625Q96I27 306 aaPredicted RBP4.36□□□□□ -1.71
NR1I3-221ENST00000505944 KRTAP4-2Q9BYR5 136 aa4.36□□□□□ -1.71
NR1I3-221ENST00000505944 C6orf48Q9UBA6 75 aa4.36□□□□□ -1.71
NR1I3-221ENST00000505944 IGLV5-39A0A0G2JS06 123 aa4.35□□□□□ -1.71
NR1I3-221ENST00000505944 A0A0U1RRA0 63 aa4.35□□□□□ -1.71
NR1I3-221ENST00000505944 TMEM223A0PJW6 202 aa4.35□□□□□ -1.71
NR1I3-221ENST00000505944 PRSS2P07478 247 aa4.35□□□□□ -1.71
NR1I3-221ENST00000505944 CNBPP62633 177 aaKnown RBP4.35□□□□□ -1.71
NR1I3-221ENST00000505944 SEC11AP67812 179 aa4.35□□□□□ -1.71
NR1I3-221ENST00000505944 GAGE2BQ13066 116 aa4.35□□□□□ -1.71
NR1I3-221ENST00000505944 C6orf226Q5I0X4 101 aa4.35□□□□□ -1.71
NR1I3-221ENST00000505944 LINC01545Q5VT33 79 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms