RNA–Protein interactions for RNA: ENST00000505149.1

LINC01088-202, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 624 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-202ENST00000505149 ATP7AQ04656 1500 aa1.56□□□□□ -2.16
LINC01088-202ENST00000505149 PHRF1Q9P1Y6 1649 aaKnown RBP1.56□□□□□ -2.16
LINC01088-202ENST00000505149 HEATR5BQ9P2D3 2071 aa1.56□□□□□ -2.16
LINC01088-202ENST00000505149 PLCH1Q4KWH8 1693 aa1.56□□□□□ -2.16
LINC01088-202ENST00000505149 IGKV2-40A0A087WW87 121 aaPredicted RBP1.56□□□□□ -2.16
LINC01088-202ENST00000505149 LCE6AA0A183 80 aa1.56□□□□□ -2.16
LINC01088-202ENST00000505149 SPINK4O60575 86 aa1.56□□□□□ -2.16
LINC01088-202ENST00000505149 IGKV2D-40P01614 121 aaPredicted RBP1.56□□□□□ -2.16
LINC01088-202ENST00000505149 SPINK7P58062 85 aa1.56□□□□□ -2.16
LINC01088-202ENST00000505149 FXYD6P3P58550 94 aa1.56□□□□□ -2.16
LINC01088-202ENST00000505149 COX17Q14061 63 aa1.56□□□□□ -2.16
LINC01088-202ENST00000505149 DEFB134Q4QY38 66 aa1.56□□□□□ -2.16
LINC01088-202ENST00000505149 LINC00322Q6ZN03 302 aaPredicted RBP1.56□□□□□ -2.16
LINC01088-202ENST00000505149 SPRR4Q96PI1 79 aa1.56□□□□□ -2.16
LINC01088-202ENST00000505149 TMEM14CQ9P0S9 112 aa1.56□□□□□ -2.16
LINC01088-202ENST00000505149 TIMM8BQ9Y5J9 83 aaPredicted RBP1.56□□□□□ -2.16
LINC01088-202ENST00000505149 POLR1AO95602 1720 aaPredicted RBP1.56□□□□□ -2.16
LINC01088-202ENST00000505149 TSC2P49815 1807 aa1.56□□□□□ -2.16
LINC01088-202ENST00000505149 TJP1Q07157 1748 aa1.55□□□□□ -2.16
LINC01088-202ENST00000505149 NUP188Q5SRE5 1749 aa1.55□□□□□ -2.16
LINC01088-202ENST00000505149 LAMB2P55268 1798 aa1.55□□□□□ -2.16
LINC01088-202ENST00000505149 TRGV4A0A0C4DH28 118 aa1.55□□□□□ -2.16
LINC01088-202ENST00000505149 A0A0G2JQZ4 141 aa1.55□□□□□ -2.16
LINC01088-202ENST00000505149 A0A1W2PNN7 141 aa1.55□□□□□ -2.16
LINC01088-202ENST00000505149 HRES1P13985 223 aa1.55□□□□□ -2.16
LINC01088-202ENST00000505149 IL9P15248 144 aa1.55□□□□□ -2.16
LINC01088-202ENST00000505149 RPL37AP61513 92 aaKnown RBP1.55□□□□□ -2.16
LINC01088-202ENST00000505149 DEFB112Q30KQ8 113 aa1.55□□□□□ -2.16
LINC01088-202ENST00000505149 DEFB132Q7Z7B7 95 aa1.55□□□□□ -2.16
LINC01088-202ENST00000505149 MYO7BQ6PIF6 2116 aa1.55□□□□□ -2.16
LINC01088-202ENST00000505149 COL11A1P12107 1806 aaPredicted RBP1.54□□□□□ -2.16
LINC01088-202ENST00000505149 ZNF236Q9UL36 1845 aa1.54□□□□□ -2.16
LINC01088-202ENST00000505149 MYOFQ9NZM1 2061 aa1.54□□□□□ -2.16
LINC01088-202ENST00000505149 HEATR1Q9H583 2144 aaKnown RBP1.54□□□□□ -2.16
LINC01088-202ENST00000505149 NBDYA0A0U1RRE5 68 aa1.54□□□□□ -2.16
LINC01088-202ENST00000505149 IGKV2-29A2NJV5 120 aaPredicted RBP1.54□□□□□ -2.16
LINC01088-202ENST00000505149 I3L3M4 83 aa1.54□□□□□ -2.16
LINC01088-202ENST00000505149 M0R1W7 72 aa1.54□□□□□ -2.16
LINC01088-202ENST00000505149 ARL14EPLP0DKL9 152 aa1.54□□□□□ -2.16
LINC01088-202ENST00000505149 FXYD3Q14802 87 aa1.54□□□□□ -2.16
LINC01088-202ENST00000505149 ABCC8Q09428 1581 aa1.54□□□□□ -2.16
LINC01088-202ENST00000505149 MROH2BQ7Z745 1585 aa1.54□□□□□ -2.16
LINC01088-202ENST00000505149 NHSL1Q5SYE7 1610 aa1.54□□□□□ -2.16
LINC01088-202ENST00000505149 FAM208AQ9UK61 1670 aaKnown RBP1.54□□□□□ -2.16
LINC01088-202ENST00000505149 LAMA4Q16363 1823 aa1.54□□□□□ -2.16
LINC01088-202ENST00000505149 ARFGEF1Q9Y6D6 1849 aa1.54□□□□□ -2.16
LINC01088-202ENST00000505149 CPAMD8Q8IZJ3 1885 aa1.54□□□□□ -2.16
LINC01088-202ENST00000505149 MPDZO75970 2070 aa1.54□□□□□ -2.16
LINC01088-202ENST00000505149 NINQ8N4C6 2090 aa1.54□□□□□ -2.16
LINC01088-202ENST00000505149 KIAA0100Q14667 2235 aaKnown RBP1.54□□□□□ -2.16
LINC01088-202ENST00000505149 A0A087WTM6 91 aa1.53□□□□□ -2.16
LINC01088-202ENST00000505149 LINC01546A6NGU7 62 aa1.53□□□□□ -2.16
LINC01088-202ENST00000505149 IGIPA6NJ69 53 aa1.53□□□□□ -2.16
LINC01088-202ENST00000505149 SPTBP11277 2137 aa1.53□□□□□ -2.16
LINC01088-202ENST00000505149 COX6B1P14854 86 aa1.53□□□□□ -2.16
LINC01088-202ENST00000505149 PI4KAP42356 2102 aa1.53□□□□□ -2.16
LINC01088-202ENST00000505149 CLTCL1P53675 1640 aa1.53□□□□□ -2.16
LINC01088-202ENST00000505149 FXYD4P59646 89 aa1.53□□□□□ -2.16
LINC01088-202ENST00000505149 SHPRHQ149N8 1683 aa1.53□□□□□ -2.16
LINC01088-202ENST00000505149 C10orf55Q5SWW7 151 aa1.53□□□□□ -2.16
LINC01088-202ENST00000505149 C5orf56Q8N8D9 126 aa1.53□□□□□ -2.16
LINC01088-202ENST00000505149 GBF1Q92538 1859 aa1.53□□□□□ -2.16
LINC01088-202ENST00000505149 SPAG17Q6Q759 2223 aa1.52□□□□□ -2.17
LINC01088-202ENST00000505149 BAZ2BQ9UIF8 2168 aaKnown RBP1.52□□□□□ -2.17
LINC01088-202ENST00000505149 ZGRF1Q86YA3 2104 aa1.52□□□□□ -2.17
LINC01088-202ENST00000505149 PKD1L3Q7Z443 1732 aa1.52□□□□□ -2.17
LINC01088-202ENST00000505149 C3P01024 1663 aa1.52□□□□□ -2.17
LINC01088-202ENST00000505149 TRGV2A0A075B6R0 118 aa1.52□□□□□ -2.17
LINC01088-202ENST00000505149 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.52□□□□□ -2.17
LINC01088-202ENST00000505149 TRGV1A0A0A0MS02 117 aa1.52□□□□□ -2.17
LINC01088-202ENST00000505149 NDUFA4O00483 81 aa1.52□□□□□ -2.17
LINC01088-202ENST00000505149 TPRXLQ17RH7 258 aa1.52□□□□□ -2.17
LINC01088-202ENST00000505149 RICTORQ6R327 1708 aa1.52□□□□□ -2.17
LINC01088-202ENST00000505149 TULP4Q9NRJ4 1543 aa1.51□□□□□ -2.17
LINC01088-202ENST00000505149 A0A1B0GU69 56 aa1.51□□□□□ -2.17
LINC01088-202ENST00000505149 H0YGX0 51 aa1.51□□□□□ -2.17
LINC01088-202ENST00000505149 NDUFA3O95167 84 aa1.51□□□□□ -2.17
LINC01088-202ENST00000505149 IGLV6-57P01721 117 aa1.51□□□□□ -2.17
LINC01088-202ENST00000505149 ACYP2P14621 99 aa1.51□□□□□ -2.17
LINC01088-202ENST00000505149 HAMPP81172 84 aa1.51□□□□□ -2.17
LINC01088-202ENST00000505149 DEFB114Q30KQ6 69 aa1.51□□□□□ -2.17
LINC01088-202ENST00000505149 COA5Q86WW8 74 aa1.51□□□□□ -2.17
LINC01088-202ENST00000505149 ZNF625Q96I27 306 aaPredicted RBP1.51□□□□□ -2.17
LINC01088-202ENST00000505149 Q96NJ1 140 aa1.51□□□□□ -2.17
LINC01088-202ENST00000505149 UBR3Q6ZT12 1888 aa1.51□□□□□ -2.17
LINC01088-202ENST00000505149 NRXN2Q9P2S2 1712 aa1.51□□□□□ -2.17
LINC01088-202ENST00000505149 RREB1Q92766 1687 aa1.51□□□□□ -2.17
LINC01088-202ENST00000505149 MYO7AQ13402 2215 aa1.51□□□□□ -2.17
LINC01088-202ENST00000505149 PRRC2BQ5JSZ5 2229 aaKnown RBP1.51□□□□□ -2.17
LINC01088-202ENST00000505149 KIF21BO75037 1637 aa1.51□□□□□ -2.17
LINC01088-202ENST00000505149 SLIT1O75093 1534 aa1.5□□□□□ -2.17
LINC01088-202ENST00000505149 ANKRD36CQ5JPF3 1778 aa1.5□□□□□ -2.17
LINC01088-202ENST00000505149 INTS1Q8N201 2190 aaKnown RBP1.5□□□□□ -2.17
LINC01088-202ENST00000505149 LOC110117498A0A087WWA1 95 aa1.5□□□□□ -2.17
LINC01088-202ENST00000505149 LINC00959A0A1B0GUT2 108 aa1.5□□□□□ -2.17
LINC01088-202ENST00000505149 ETDCA0A1B0GVM5 59 aa1.5□□□□□ -2.17
LINC01088-202ENST00000505149 H3BRN7 92 aa1.5□□□□□ -2.17
LINC01088-202ENST00000505149 SPACA4Q8TDM5 124 aa1.5□□□□□ -2.17
LINC01088-202ENST00000505149 LINC00472Q9H8W2 130 aa1.5□□□□□ -2.17
LINC01088-202ENST00000505149 TMEM167BQ9NRX6 74 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms