RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 IFI27L1Q96BM0 104 aa10.74□□□□□ -0.69
SYNE4-207ENST00000505054 SMIM1B2RUZ4 78 aa10.73□□□□□ -0.69
SYNE4-207ENST00000505054 F8WDY8 70 aa10.73□□□□□ -0.69
SYNE4-207ENST00000505054 C10orf25Q5T742 122 aa10.73□□□□□ -0.69
SYNE4-207ENST00000505054 HMCN2Q8NDA2 5059 aa10.73□□□□□ -0.69
SYNE4-207ENST00000505054 UNQ6190/PRO20217Q6UXQ8 127 aa10.72□□□□□ -0.69
SYNE4-207ENST00000505054 SPACA4Q8TDM5 124 aa10.72□□□□□ -0.69
SYNE4-207ENST00000505054 PACRGQ96M98 296 aaPredicted RBP10.72□□□□□ -0.69
SYNE4-207ENST00000505054 MRPL35Q9NZE8 188 aaKnown RBP10.72□□□□□ -0.69
SYNE4-207ENST00000505054 A0A096LNI7 61 aa10.71□□□□□ -0.69
SYNE4-207ENST00000505054 NDUFA1O15239 70 aa10.71□□□□□ -0.69
SYNE4-207ENST00000505054 C2orf82Q6UX34 121 aa10.71□□□□□ -0.69
SYNE4-207ENST00000505054 TOMM7Q9P0U1 55 aa10.71□□□□□ -0.69
SYNE4-207ENST00000505054 TRAV12-1A0A0B4J245 112 aa10.7□□□□□ -0.7
SYNE4-207ENST00000505054 IGKV2-24A0A0C4DH68 120 aa10.7□□□□□ -0.7
SYNE4-207ENST00000505054 C11orf86A6NJI1 115 aa10.7□□□□□ -0.7
SYNE4-207ENST00000505054 LEPROTL1O95214 131 aa10.7□□□□□ -0.7
SYNE4-207ENST00000505054 SPINK8P0C7L1 97 aa10.7□□□□□ -0.7
SYNE4-207ENST00000505054 ZNF22P17026 224 aaPredicted RBP10.7□□□□□ -0.7
SYNE4-207ENST00000505054 RNF151Q2KHN1 245 aa10.7□□□□□ -0.7
SYNE4-207ENST00000505054 Q8IZM0 81 aa10.7□□□□□ -0.7
SYNE4-207ENST00000505054 C6orf48Q9UBA6 75 aa10.7□□□□□ -0.7
SYNE4-207ENST00000505054 CHTOPQ9Y3Y2 248 aaKnown RBP10.69□□□□□ -0.7
SYNE4-207ENST00000505054 LRP1Q07954 4544 aaKnown RBP10.68□□□□□ -0.7
SYNE4-207ENST00000505054 LOC107984640A0A0U1RRK4 108 aa10.68□□□□□ -0.7
SYNE4-207ENST00000505054 PRSS2P07478 247 aa10.68□□□□□ -0.7
SYNE4-207ENST00000505054 KRTAP10-4P60372 401 aaPredicted RBP10.68□□□□□ -0.7
SYNE4-207ENST00000505054 PKIGQ9Y2B9 76 aa10.68□□□□□ -0.7
SYNE4-207ENST00000505054 A0A087WYN8 130 aa10.67□□□□□ -0.7
SYNE4-207ENST00000505054 H3BRM9 83 aa10.67□□□□□ -0.7
SYNE4-207ENST00000505054 OXTP01178 125 aa10.67□□□□□ -0.7
SYNE4-207ENST00000505054 FABP4P15090 132 aa10.67□□□□□ -0.7
SYNE4-207ENST00000505054 MAJINQ3KP22 176 aa10.67□□□□□ -0.7
SYNE4-207ENST00000505054 PTTG1IPP53801 180 aa10.66□□□□□ -0.7
SYNE4-207ENST00000505054 C6orf226Q5I0X4 101 aa10.66□□□□□ -0.7
SYNE4-207ENST00000505054 COX7B2Q8TF08 81 aa10.66□□□□□ -0.7
SYNE4-207ENST00000505054 HSPB8Q9UJY1 196 aa10.66□□□□□ -0.7
SYNE4-207ENST00000505054 IGLV5-39A0A0G2JS06 123 aa10.65□□□□□ -0.7
SYNE4-207ENST00000505054 TRBV30A0A0K0K1B3 111 aa10.65□□□□□ -0.7
SYNE4-207ENST00000505054 F8VRH5 84 aa10.65□□□□□ -0.7
SYNE4-207ENST00000505054 CKS1BP61024 79 aa10.65□□□□□ -0.7
SYNE4-207ENST00000505054 RPL18AQ02543 176 aaKnown RBP10.65□□□□□ -0.7
SYNE4-207ENST00000505054 GAGE2BQ13066 116 aa10.65□□□□□ -0.7
SYNE4-207ENST00000505054 ODF1Q14990 250 aa10.65□□□□□ -0.7
SYNE4-207ENST00000505054 COA6Q5JTJ3 125 aaKnown RBP10.65□□□□□ -0.7
SYNE4-207ENST00000505054 PLAC8Q9NZF1 115 aa10.65□□□□□ -0.7
SYNE4-207ENST00000505054 FAT3Q8TDW7 4589 aa10.65□□□□□ -0.7
SYNE4-207ENST00000505054 H0Y8G0 127 aa10.64□□□□□ -0.71
SYNE4-207ENST00000505054 TLX1NBP0CAT3 122 aa10.64□□□□□ -0.71
SYNE4-207ENST00000505054 C9orf116Q5BN46 136 aaPredicted RBP10.64□□□□□ -0.71
SYNE4-207ENST00000505054 TMEM170BQ5T4T1 132 aa10.64□□□□□ -0.71
SYNE4-207ENST00000505054 DPH3Q96FX2 82 aa10.64□□□□□ -0.71
SYNE4-207ENST00000505054 LINC00474Q9P2X8 69 aa10.64□□□□□ -0.71
SYNE4-207ENST00000505054 CXCL5P42830 114 aa10.63□□□□□ -0.71
SYNE4-207ENST00000505054 STPG4Q8N801 248 aa10.63□□□□□ -0.71
SYNE4-207ENST00000505054 PLA2G2DQ9UNK4 145 aa10.63□□□□□ -0.71
SYNE4-207ENST00000505054 UBR4Q5T4S7 5183 aa10.62□□□□□ -0.71
SYNE4-207ENST00000505054 Q6ZRP5 223 aa10.62□□□□□ -0.71
SYNE4-207ENST00000505054 PKHD1L1Q86WI1 4243 aa10.62□□□□□ -0.71
SYNE4-207ENST00000505054 TMEM223A0PJW6 202 aa10.59□□□□□ -0.71
SYNE4-207ENST00000505054 NDUFC2-KCTD14E9PQ53 114 aa10.59□□□□□ -0.71
SYNE4-207ENST00000505054 PMCHL2Q9BQD1 86 aa10.59□□□□□ -0.71
SYNE4-207ENST00000505054 MAP1LC3CQ9BXW4 147 aa10.59□□□□□ -0.71
SYNE4-207ENST00000505054 A0A1W2PNN7 141 aa10.58□□□□□ -0.72
SYNE4-207ENST00000505054 GAGE2EQ4V326 116 aa10.58□□□□□ -0.72
SYNE4-207ENST00000505054 GAGE2DQ9UEU5 116 aa10.58□□□□□ -0.72
SYNE4-207ENST00000505054 SYS1-DBNDD2H3BUS1 97 aa10.56□□□□□ -0.72
SYNE4-207ENST00000505054 PLNP26678 52 aa10.56□□□□□ -0.72
SYNE4-207ENST00000505054 RPL37AP61513 92 aaKnown RBP10.56□□□□□ -0.72
SYNE4-207ENST00000505054 DPM2O94777 84 aa10.55□□□□□ -0.72
SYNE4-207ENST00000505054 FAM168BA1KXE4 195 aa10.54□□□□□ -0.72
SYNE4-207ENST00000505054 C9orf129Q5T035 196 aaKnown RBP10.54□□□□□ -0.72
SYNE4-207ENST00000505054 IGKCP01834 107 aa10.53□□□□□ -0.72
SYNE4-207ENST00000505054 KRTAP7-1Q8IUC3 87 aa10.53□□□□□ -0.72
SYNE4-207ENST00000505054 ZNF625Q96I27 306 aaPredicted RBP10.53□□□□□ -0.72
SYNE4-207ENST00000505054 C3orf79P0CE67 100 aa10.52□□□□□ -0.73
SYNE4-207ENST00000505054 XAGE1AQ9HD64 81 aa10.52□□□□□ -0.73
SYNE4-207ENST00000505054 LINC01545Q5VT33 79 aa10.51□□□□□ -0.73
SYNE4-207ENST00000505054 PET117Q6UWS5 81 aa10.51□□□□□ -0.73
SYNE4-207ENST00000505054 C7orf33Q8WU49 177 aa10.51□□□□□ -0.73
SYNE4-207ENST00000505054 HNRNPA3P51991 378 aaKnown RBP10.5□□□□□ -0.73
SYNE4-207ENST00000505054 TSPEAR-AS2P59090 65 aa10.5□□□□□ -0.73
SYNE4-207ENST00000505054 FAM19A5Q7Z5A7 132 aaPredicted RBP10.5□□□□□ -0.73
SYNE4-207ENST00000505054 SFTA2Q6UW10 78 aa10.49□□□□□ -0.73
SYNE4-207ENST00000505054 HIST3H2BBQ8N257 126 aa10.49□□□□□ -0.73
SYNE4-207ENST00000505054 ERG28Q9UKR5 140 aa10.49□□□□□ -0.73
SYNE4-207ENST00000505054 PFN2P35080 140 aa10.48□□□□□ -0.73
SYNE4-207ENST00000505054 KRTDAPP60985 99 aa10.48□□□□□ -0.73
SYNE4-207ENST00000505054 PHF5AQ7RTV0 110 aaKnown RBP10.48□□□□□ -0.73
SYNE4-207ENST00000505054 LEPROTO15243 131 aa10.47□□□□□ -0.73
SYNE4-207ENST00000505054 HERVK_113P61574 105 aa10.47□□□□□ -0.73
SYNE4-207ENST00000505054 PLEKHB2Q96CS7 222 aa10.46□□□□□ -0.73
SYNE4-207ENST00000505054 NDUFA12Q9UI09 145 aa10.46□□□□□ -0.73
SYNE4-207ENST00000505054 M0QXV9 152 aa10.45□□□□□ -0.74
SYNE4-207ENST00000505054 PRR3P79522 188 aaKnown RBP10.45□□□□□ -0.74
SYNE4-207ENST00000505054 COX17Q14061 63 aa10.45□□□□□ -0.74
SYNE4-207ENST00000505054 HIST1H2BLQ99880 126 aa10.45□□□□□ -0.74
SYNE4-207ENST00000505054 J3QQQ9 107 aa10.44□□□□□ -0.74
SYNE4-207ENST00000505054 S100A6P06703 90 aa10.44□□□□□ -0.74
SYNE4-207ENST00000505054 MT1HL1P0DM35 61 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms