RNA–Protein interactions for RNA: ENST00000504651.5

DDR1-253, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-253ENST00000504651 C9orf163Q8N9P6 203 aa9.04□□□□□ -0.96
DDR1-253ENST00000504651 HECTD4Q9Y4D8 3996 aa9.02□□□□□ -0.97
DDR1-253ENST00000504651 C10orf25Q5T742 122 aa9.02□□□□□ -0.97
DDR1-253ENST00000504651 UNQ6190/PRO20217Q6UXQ8 127 aa9.02□□□□□ -0.97
DDR1-253ENST00000504651 AKR1D1P51857 326 aa9.01□□□□□ -0.97
DDR1-253ENST00000504651 KRTAP10-1P60331 282 aa9.01□□□□□ -0.97
DDR1-253ENST00000504651 C6orf48Q9UBA6 75 aa9.01□□□□□ -0.97
DDR1-253ENST00000504651 PKIGQ9Y2B9 76 aa9.01□□□□□ -0.97
DDR1-253ENST00000504651 TRBV30A0A0K0K1B3 111 aa9□□□□□ -0.97
DDR1-253ENST00000504651 RNF151Q2KHN1 245 aa9□□□□□ -0.97
DDR1-253ENST00000504651 ATOH7Q8N100 152 aa9□□□□□ -0.97
DDR1-253ENST00000504651 LEPROTO15243 131 aa8.99□□□□□ -0.97
DDR1-253ENST00000504651 PLEKHB2Q96CS7 222 aa8.99□□□□□ -0.97
DDR1-253ENST00000504651 LOC107984640A0A0U1RRK4 108 aa8.98□□□□□ -0.97
DDR1-253ENST00000504651 SFTA2Q6UW10 78 aa8.98□□□□□ -0.97
DDR1-253ENST00000504651 E9PLD3 99 aa8.97□□□□□ -0.97
DDR1-253ENST00000504651 SCGB1D1O95968 90 aa8.97□□□□□ -0.97
DDR1-253ENST00000504651 LGALS3P17931 250 aaKnown RBP8.97□□□□□ -0.97
DDR1-253ENST00000504651 TSPEAR-AS2P59090 65 aa8.97□□□□□ -0.97
DDR1-253ENST00000504651 RPL18AQ02543 176 aaKnown RBP8.97□□□□□ -0.97
DDR1-253ENST00000504651 SDIM1Q6ZPB5 146 aa8.97□□□□□ -0.97
DDR1-253ENST00000504651 STPG4Q8N801 248 aa8.97□□□□□ -0.97
DDR1-253ENST00000504651 EPPK1P58107 5090 aaKnown RBP8.96□□□□□ -0.97
DDR1-253ENST00000504651 J3QQQ9 107 aa8.96□□□□□ -0.98
DDR1-253ENST00000504651 C9orf116Q5BN46 136 aaPredicted RBP8.96□□□□□ -0.98
DDR1-253ENST00000504651 DNAH5Q8TE73 4624 aa8.96□□□□□ -0.98
DDR1-253ENST00000504651 A0A096LNI7 61 aa8.95□□□□□ -0.98
DDR1-253ENST00000504651 IGKV2-24A0A0C4DH68 120 aa8.95□□□□□ -0.98
DDR1-253ENST00000504651 ZNF625Q96I27 306 aaPredicted RBP8.95□□□□□ -0.98
DDR1-253ENST00000504651 NDUFA12Q9UI09 145 aa8.95□□□□□ -0.98
DDR1-253ENST00000504651 TLX1NBP0CAT3 122 aa8.94□□□□□ -0.98
DDR1-253ENST00000504651 CHTF8P0CG12 524 aa8.94□□□□□ -0.98
DDR1-253ENST00000504651 GAGE2BQ13066 116 aa8.94□□□□□ -0.98
DDR1-253ENST00000504651 Q6ZSA8 131 aa8.94□□□□□ -0.98
DDR1-253ENST00000504651 MYMXA0A1B0GTQ4 84 aa8.93□□□□□ -0.98
DDR1-253ENST00000504651 HSBP1L1C9JCN9 74 aa8.93□□□□□ -0.98
DDR1-253ENST00000504651 NDUFC2-KCTD14E9PQ53 114 aa8.93□□□□□ -0.98
DDR1-253ENST00000504651 NMUP48645 174 aa8.93□□□□□ -0.98
DDR1-253ENST00000504651 PTTG1IPP53801 180 aa8.93□□□□□ -0.98
DDR1-253ENST00000504651 HERV-K104P63124 156 aa8.93□□□□□ -0.98
DDR1-253ENST00000504651 ANKRD39Q53RE8 183 aa8.93□□□□□ -0.98
DDR1-253ENST00000504651 FAM30AQ9NZY2 134 aa8.93□□□□□ -0.98
DDR1-253ENST00000504651 ERG28Q9UKR5 140 aa8.93□□□□□ -0.98
DDR1-253ENST00000504651 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.93□□□□□ -0.98
DDR1-253ENST00000504651 DYNC1H1Q14204 4646 aaKnown RBP8.93□□□□□ -0.98
DDR1-253ENST00000504651 IGKV2D-26A0A0A0MRZ7 120 aa8.92□□□□□ -0.98
DDR1-253ENST00000504651 MAJINQ3KP22 176 aa8.92□□□□□ -0.98
DDR1-253ENST00000504651 MEIG1Q5JSS6 88 aa8.92□□□□□ -0.98
DDR1-253ENST00000504651 Q6ZRP5 223 aa8.92□□□□□ -0.98
DDR1-253ENST00000504651 SPACA4Q8TDM5 124 aa8.92□□□□□ -0.98
DDR1-253ENST00000504651 PKHD1P08F94 4074 aa8.92□□□□□ -0.98
DDR1-253ENST00000504651 PANO1I0J062 215 aa8.91□□□□□ -0.98
DDR1-253ENST00000504651 PFN2P35080 140 aa8.91□□□□□ -0.98
DDR1-253ENST00000504651 JOSD1Q15040 202 aaPredicted RBP8.91□□□□□ -0.98
DDR1-253ENST00000504651 GAGE2EQ4V326 116 aa8.91□□□□□ -0.98
DDR1-253ENST00000504651 LINC00474Q9P2X8 69 aa8.91□□□□□ -0.98
DDR1-253ENST00000504651 GAGE2DQ9UEU5 116 aa8.91□□□□□ -0.98
DDR1-253ENST00000504651 HAMPP81172 84 aa8.9□□□□□ -0.98
DDR1-253ENST00000504651 CIRBPQ14011 172 aaKnown RBP8.9□□□□□ -0.98
DDR1-253ENST00000504651 ZNF815PA8K554 130 aa8.89□□□□□ -0.99
DDR1-253ENST00000504651 COX17Q14061 63 aa8.89□□□□□ -0.99
DDR1-253ENST00000504651 DPH3Q96FX2 82 aa8.89□□□□□ -0.99
DDR1-253ENST00000504651 A0A0U1RRA0 63 aa8.88□□□□□ -0.99
DDR1-253ENST00000504651 CDK2AP2O75956 126 aa8.88□□□□□ -0.99
DDR1-253ENST00000504651 LINC00158P58513 81 aa8.88□□□□□ -0.99
DDR1-253ENST00000504651 SCXQ7RTU7 201 aa8.88□□□□□ -0.99
DDR1-253ENST00000504651 TTTY13Q9BZ97 58 aa8.88□□□□□ -0.99
DDR1-253ENST00000504651 LINC00587B1AMM8 73 aa8.87□□□□□ -0.99
DDR1-253ENST00000504651 SMIM13P0DJ93 91 aa8.87□□□□□ -0.99
DDR1-253ENST00000504651 XGP55808 180 aa8.87□□□□□ -0.99
DDR1-253ENST00000504651 PYY3Q5JQD4 70 aa8.87□□□□□ -0.99
DDR1-253ENST00000504651 XAGE1AQ9HD64 81 aa8.87□□□□□ -0.99
DDR1-253ENST00000504651 LRP1BQ9NZR2 4599 aa8.87□□□□□ -0.99
DDR1-253ENST00000504651 A0A087WYN8 130 aa8.86□□□□□ -0.99
DDR1-253ENST00000504651 CIRBP-AS1Q8TBR5 109 aa8.86□□□□□ -0.99
DDR1-253ENST00000504651 VAMP8Q9BV40 100 aa8.86□□□□□ -0.99
DDR1-253ENST00000504651 A0A0J9YXY3 114 aa8.85□□□□□ -0.99
DDR1-253ENST00000504651 C9orf129Q5T035 196 aaKnown RBP8.85□□□□□ -0.99
DDR1-253ENST00000504651 FAM19A5Q7Z5A7 132 aaPredicted RBP8.84□□□□□ -0.99
DDR1-253ENST00000504651 PCP2Q8IVA1 136 aa8.84□□□□□ -0.99
DDR1-253ENST00000504651 MIR7-3HGQ8N6C7 128 aa8.84□□□□□ -0.99
DDR1-253ENST00000504651 BIRC6Q9NR09 4857 aa8.84□□□□□ -0.99
DDR1-253ENST00000504651 PLAC8Q9NZF1 115 aa8.84□□□□□ -0.99
DDR1-253ENST00000504651 PAM16Q9Y3D7 125 aa8.84□□□□□ -0.99
DDR1-253ENST00000504651 SPATA45Q537H7 98 aa8.83□□□□□ -1
DDR1-253ENST00000504651 SCGB1D4Q6XE38 83 aa8.83□□□□□ -1
DDR1-253ENST00000504651 SND1-IT1Q9HBX3 110 aa8.83□□□□□ -1
DDR1-253ENST00000504651 A0A1W2PNN7 141 aa8.82□□□□□ -1
DDR1-253ENST00000504651 FAM168BA1KXE4 195 aa8.82□□□□□ -1
DDR1-253ENST00000504651 DNAH8Q96JB1 4490 aa8.81□□□□□ -1
DDR1-253ENST00000504651 DAND5Q8N907 189 aa8.81□□□□□ -1
DDR1-253ENST00000504651 TIMM17BO60830 172 aa8.8□□□□□ -1
DDR1-253ENST00000504651 SERTAD4-AS1Q5TG53 156 aa8.8□□□□□ -1
DDR1-253ENST00000504651 APOBP04114 4563 aaKnown RBP8.8□□□□□ -1
DDR1-253ENST00000504651 TMEM238C9JI98 176 aa8.79□□□□□ -1
DDR1-253ENST00000504651 M0QXV9 152 aa8.79□□□□□ -1
DDR1-253ENST00000504651 COX8AP10176 69 aa8.79□□□□□ -1
DDR1-253ENST00000504651 MIEN1Q9BRT3 115 aa8.79□□□□□ -1
DDR1-253ENST00000504651 SMR3BP02814 79 aaPredicted RBP8.78□□□□□ -1
DDR1-253ENST00000504651 LITAFQ99732 161 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms