RNA–Protein interactions for RNA: ENST00000504386.1

SKP2-203, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5

Gene SKP2, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-203ENST00000504386 LINC00526Q96FQ7 95 aa4.97□□□□□ -1.61
SKP2-203ENST00000504386 CDKN2A-AS1Q9UH64 79 aa4.97□□□□□ -1.61
SKP2-203ENST00000504386 KIAA1109Q2LD37 5005 aa4.97□□□□□ -1.61
SKP2-203ENST00000504386 A0A096LNI7 61 aa4.96□□□□□ -1.62
SKP2-203ENST00000504386 TRAV12-1A0A0B4J245 112 aa4.96□□□□□ -1.62
SKP2-203ENST00000504386 NDUFC2-KCTD14E9PQ53 114 aa4.96□□□□□ -1.62
SKP2-203ENST00000504386 TRGC2P03986 189 aa4.96□□□□□ -1.62
SKP2-203ENST00000504386 IGLC3P0DOY3 106 aa4.96□□□□□ -1.62
SKP2-203ENST00000504386 IFI27L1Q96BM0 104 aa4.96□□□□□ -1.62
SKP2-203ENST00000504386 HSPB8Q9UJY1 196 aa4.96□□□□□ -1.62
SKP2-203ENST00000504386 DNAH11Q96DT5 4516 aa4.96□□□□□ -1.62
SKP2-203ENST00000504386 COLCA2A8K830 154 aa4.95□□□□□ -1.62
SKP2-203ENST00000504386 SMIM1B2RUZ4 78 aa4.95□□□□□ -1.62
SKP2-203ENST00000504386 CHTF8P0CG12 524 aa4.95□□□□□ -1.62
SKP2-203ENST00000504386 KIAA0087Q14695 138 aa4.95□□□□□ -1.62
SKP2-203ENST00000504386 UNQ6190/PRO20217Q6UXQ8 127 aa4.95□□□□□ -1.62
SKP2-203ENST00000504386 COX7B2Q8TF08 81 aa4.95□□□□□ -1.62
SKP2-203ENST00000504386 URB1-AS1Q96HZ7 61 aa4.95□□□□□ -1.62
SKP2-203ENST00000504386 CHTOPQ9Y3Y2 248 aaKnown RBP4.95□□□□□ -1.62
SKP2-203ENST00000504386 FAT2Q9NYQ8 4349 aa4.95□□□□□ -1.62
SKP2-203ENST00000504386 A0A096LNJ9 63 aa4.94□□□□□ -1.62
SKP2-203ENST00000504386 LEPROTL1O95214 131 aa4.94□□□□□ -1.62
SKP2-203ENST00000504386 S100A1P23297 94 aa4.94□□□□□ -1.62
SKP2-203ENST00000504386 ODF1Q14990 250 aa4.94□□□□□ -1.62
SKP2-203ENST00000504386 PMCHL1Q16048 86 aa4.94□□□□□ -1.62
SKP2-203ENST00000504386 ZC2HC1BQ5TFG8 222 aa4.94□□□□□ -1.62
SKP2-203ENST00000504386 C6orf48Q9UBA6 75 aa4.94□□□□□ -1.62
SKP2-203ENST00000504386 DNAH2Q9P225 4427 aa4.94□□□□□ -1.62
SKP2-203ENST00000504386 LINC00587B1AMM8 73 aa4.93□□□□□ -1.62
SKP2-203ENST00000504386 PANO1I0J062 215 aa4.93□□□□□ -1.62
SKP2-203ENST00000504386 SERF1AO75920 110 aa4.93□□□□□ -1.62
SKP2-203ENST00000504386 PLNP26678 52 aa4.93□□□□□ -1.62
SKP2-203ENST00000504386 C9orf116Q5BN46 136 aaPredicted RBP4.93□□□□□ -1.62
SKP2-203ENST00000504386 TMEM170BQ5T4T1 132 aa4.93□□□□□ -1.62
SKP2-203ENST00000504386 C2orf82Q6UX34 121 aa4.93□□□□□ -1.62
SKP2-203ENST00000504386 Q6ZRP5 223 aa4.93□□□□□ -1.62
SKP2-203ENST00000504386 SPINK8P0C7L1 97 aa4.92□□□□□ -1.62
SKP2-203ENST00000504386 ZNF22P17026 224 aaPredicted RBP4.92□□□□□ -1.62
SKP2-203ENST00000504386 COX17Q14061 63 aa4.92□□□□□ -1.62
SKP2-203ENST00000504386 GAGE2EQ4V326 116 aa4.92□□□□□ -1.62
SKP2-203ENST00000504386 C10orf25Q5T742 122 aa4.92□□□□□ -1.62
SKP2-203ENST00000504386 KRTAP4-5Q9BYR2 181 aa4.92□□□□□ -1.62
SKP2-203ENST00000504386 GAGE2DQ9UEU5 116 aa4.92□□□□□ -1.62
SKP2-203ENST00000504386 HERC2O95714 4834 aa4.92□□□□□ -1.62
SKP2-203ENST00000504386 PKHD1P08F94 4074 aa4.92□□□□□ -1.62
SKP2-203ENST00000504386 PKD1P98161 4303 aa4.91□□□□□ -1.62
SKP2-203ENST00000504386 IGLV5-39A0A0G2JS06 123 aa4.91□□□□□ -1.62
SKP2-203ENST00000504386 AKR1D1P51857 326 aa4.91□□□□□ -1.62
SKP2-203ENST00000504386 HERVK_113P61574 105 aa4.91□□□□□ -1.62
SKP2-203ENST00000504386 LBHQ53QV2 105 aaPredicted RBP4.91□□□□□ -1.62
SKP2-203ENST00000504386 MAP1LC3CQ9BXW4 147 aa4.91□□□□□ -1.62
SKP2-203ENST00000504386 RYR1P21817 5038 aa4.9□□□□□ -1.62
SKP2-203ENST00000504386 C11orf86A6NJI1 115 aa4.9□□□□□ -1.63
SKP2-203ENST00000504386 OXTP01178 125 aa4.9□□□□□ -1.63
SKP2-203ENST00000504386 PRR3P79522 188 aaKnown RBP4.9□□□□□ -1.63
SKP2-203ENST00000504386 FAM19A2Q8N3H0 131 aa4.9□□□□□ -1.63
SKP2-203ENST00000504386 M0QXV9 152 aa4.89□□□□□ -1.63
SKP2-203ENST00000504386 HIST1H2BKO60814 126 aa4.89□□□□□ -1.63
SKP2-203ENST00000504386 ATP6V1G1O75348 118 aa4.89□□□□□ -1.63
SKP2-203ENST00000504386 HIST1H2BJP06899 126 aa4.89□□□□□ -1.63
SKP2-203ENST00000504386 HIST1H2BOP23527 126 aa4.89□□□□□ -1.63
SKP2-203ENST00000504386 HIST1H2BBP33778 126 aa4.89□□□□□ -1.63
SKP2-203ENST00000504386 HIST1H2BDP58876 126 aa4.89□□□□□ -1.63
SKP2-203ENST00000504386 HIST1H2BCP62807 126 aa4.89□□□□□ -1.63
SKP2-203ENST00000504386 HERV-K104P63124 156 aa4.89□□□□□ -1.63
SKP2-203ENST00000504386 UBE2BP63146 152 aa4.89□□□□□ -1.63
SKP2-203ENST00000504386 HIST2H2BEQ16778 126 aa4.89□□□□□ -1.63
SKP2-203ENST00000504386 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.89□□□□□ -1.63
SKP2-203ENST00000504386 HIST1H2BHQ93079 126 aa4.89□□□□□ -1.63
SKP2-203ENST00000504386 HIST1H2BNQ99877 126 aa4.89□□□□□ -1.63
SKP2-203ENST00000504386 HIST1H2BMQ99879 126 aa4.89□□□□□ -1.63
SKP2-203ENST00000504386 TP73-AS1Q9UF72 201 aa4.89□□□□□ -1.63
SKP2-203ENST00000504386 A0A1W2PNN7 141 aa4.88□□□□□ -1.63
SKP2-203ENST00000504386 TMEM223A0PJW6 202 aa4.88□□□□□ -1.63
SKP2-203ENST00000504386 H0Y8G0 127 aa4.88□□□□□ -1.63
SKP2-203ENST00000504386 DPM2O94777 84 aa4.88□□□□□ -1.63
SKP2-203ENST00000504386 RPL24P83731 157 aaKnown RBP4.88□□□□□ -1.63
SKP2-203ENST00000504386 REG3GQ6UW15 175 aa4.88□□□□□ -1.63
SKP2-203ENST00000504386 SPINK6Q6UWN8 80 aa4.88□□□□□ -1.63
SKP2-203ENST00000504386 FAM19A5Q7Z5A7 132 aaPredicted RBP4.88□□□□□ -1.63
SKP2-203ENST00000504386 NKAPP1Q8N9T2 125 aa4.88□□□□□ -1.63
SKP2-203ENST00000504386 PLEKHB2Q96CS7 222 aa4.88□□□□□ -1.63
SKP2-203ENST00000504386 ERG28Q9UKR5 140 aa4.88□□□□□ -1.63
SKP2-203ENST00000504386 DYNC1H1Q14204 4646 aaKnown RBP4.87□□□□□ -1.63
SKP2-203ENST00000504386 MYMXA0A1B0GTQ4 84 aa4.87□□□□□ -1.63
SKP2-203ENST00000504386 C20orf202A1L168 122 aa4.87□□□□□ -1.63
SKP2-203ENST00000504386 KRTAP29-1A8MX34 341 aaPredicted RBP4.87□□□□□ -1.63
SKP2-203ENST00000504386 SCO1O75880 301 aa4.87□□□□□ -1.63
SKP2-203ENST00000504386 FABP4P15090 132 aa4.87□□□□□ -1.63
SKP2-203ENST00000504386 NMUP48645 174 aa4.87□□□□□ -1.63
SKP2-203ENST00000504386 KRTAP10-4P60372 401 aaPredicted RBP4.87□□□□□ -1.63
SKP2-203ENST00000504386 KRTAP17-1Q9BYP8 105 aa4.87□□□□□ -1.63
SKP2-203ENST00000504386 PLA2G2DQ9UNK4 145 aa4.87□□□□□ -1.63
SKP2-203ENST00000504386 LRP1BQ9NZR2 4599 aa4.86□□□□□ -1.63
SKP2-203ENST00000504386 DNAH5Q8TE73 4624 aa4.86□□□□□ -1.63
SKP2-203ENST00000504386 NUPR1O60356 82 aa4.86□□□□□ -1.63
SKP2-203ENST00000504386 IGKCP01834 107 aa4.86□□□□□ -1.63
SKP2-203ENST00000504386 COA6Q5JTJ3 125 aaKnown RBP4.86□□□□□ -1.63
SKP2-203ENST00000504386 C9orf129Q5T035 196 aaKnown RBP4.86□□□□□ -1.63
SKP2-203ENST00000504386 LEPROTO15243 131 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms