RNA–Protein interactions for RNA: ENST00000504274.1

COPS4-203, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2

Gene COPS4, Length 457 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-203ENST00000504274 CUX1P39880 1505 aa1.29□□□□□ -2.2
COPS4-203ENST00000504274 ABCC2Q92887 1545 aa1.29□□□□□ -2.2
COPS4-203ENST00000504274 INO80Q9ULG1 1556 aaPredicted RBP1.29□□□□□ -2.2
COPS4-203ENST00000504274 PARP4Q9UKK3 1724 aaKnown RBP1.29□□□□□ -2.2
COPS4-203ENST00000504274 PDCD5O14737 125 aa1.28□□□□□ -2.2
COPS4-203ENST00000504274 ANGP03950 147 aaKnown RBP1.28□□□□□ -2.2
COPS4-203ENST00000504274 THOC2Q8NI27 1593 aaKnown RBP1.28□□□□□ -2.2
COPS4-203ENST00000504274 LRRC37A2A6NM11 1700 aa1.28□□□□□ -2.2
COPS4-203ENST00000504274 ABCC1P33527 1531 aa1.27□□□□□ -2.21
COPS4-203ENST00000504274 C1orf167Q5SNV9 1468 aa1.27□□□□□ -2.21
COPS4-203ENST00000504274 SMIM31A0A1B0GVY4 71 aa1.27□□□□□ -2.21
COPS4-203ENST00000504274 SPINT3P49223 89 aa1.27□□□□□ -2.21
COPS4-203ENST00000504274 RPL37P61927 97 aaKnown RBP1.27□□□□□ -2.21
COPS4-203ENST00000504274 DEFA5Q01523 94 aa1.27□□□□□ -2.21
COPS4-203ENST00000504274 LINC00575Q6W349 94 aa1.27□□□□□ -2.21
COPS4-203ENST00000504274 PIK3C2BO00750 1634 aa1.26□□□□□ -2.21
COPS4-203ENST00000504274 ZDBF2Q9HCK1 2354 aa1.26□□□□□ -2.21
COPS4-203ENST00000504274 MYMXA0A1B0GTQ4 84 aa1.26□□□□□ -2.21
COPS4-203ENST00000504274 NCR3O14931 201 aa1.26□□□□□ -2.21
COPS4-203ENST00000504274 DEFB121Q5J5C9 76 aa1.26□□□□□ -2.21
COPS4-203ENST00000504274 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.26□□□□□ -2.21
COPS4-203ENST00000504274 XRN1Q8IZH2 1706 aaKnown RBP1.26□□□□□ -2.21
COPS4-203ENST00000504274 CD163L1Q9NR16 1453 aa1.25□□□□□ -2.21
COPS4-203ENST00000504274 CNTRLQ7Z7A1 2325 aa1.25□□□□□ -2.21
COPS4-203ENST00000504274 K7EIL1 84 aa1.25□□□□□ -2.21
COPS4-203ENST00000504274 Q6ZRX8 168 aa1.25□□□□□ -2.21
COPS4-203ENST00000504274 LINC00846Q9NV44 126 aa1.25□□□□□ -2.21
COPS4-203ENST00000504274 UBE2D4Q9Y2X8 147 aa1.25□□□□□ -2.21
COPS4-203ENST00000504274 WIZO95785 1651 aa1.25□□□□□ -2.21
COPS4-203ENST00000504274 SETBP1Q9Y6X0 1596 aa1.25□□□□□ -2.21
COPS4-203ENST00000504274 TIAM2Q8IVF5 1701 aa1.24□□□□□ -2.21
COPS4-203ENST00000504274 A0A1B0GWA3 101 aa1.24□□□□□ -2.21
COPS4-203ENST00000504274 KANTRA0A1W2PQU2 76 aa1.24□□□□□ -2.21
COPS4-203ENST00000504274 MGPP08493 103 aa1.24□□□□□ -2.21
COPS4-203ENST00000504274 SPATA8Q6RVD6 105 aa1.24□□□□□ -2.21
COPS4-203ENST00000504274 HEPN1Q6WQI6 88 aa1.24□□□□□ -2.21
COPS4-203ENST00000504274 USP32Q8NFA0 1604 aa1.24□□□□□ -2.21
COPS4-203ENST00000504274 SLIT1O75093 1534 aa1.24□□□□□ -2.21
COPS4-203ENST00000504274 ATP7BP35670 1465 aa1.24□□□□□ -2.21
COPS4-203ENST00000504274 COL14A1Q05707 1796 aaKnown RBP1.24□□□□□ -2.21
COPS4-203ENST00000504274 BCORQ6W2J9 1755 aa1.24□□□□□ -2.21
COPS4-203ENST00000504274 LRP6O75581 1613 aa1.23□□□□□ -2.21
COPS4-203ENST00000504274 ABCA9Q8IUA7 1624 aa1.23□□□□□ -2.21
COPS4-203ENST00000504274 ACYP1P07311 99 aa1.23□□□□□ -2.21
COPS4-203ENST00000504274 C10orf113Q5VZT2 155 aa1.23□□□□□ -2.21
COPS4-203ENST00000504274 DEFB107AQ8IZN7 70 aa1.23□□□□□ -2.21
COPS4-203ENST00000504274 POLR1AO95602 1720 aaPredicted RBP1.23□□□□□ -2.21
COPS4-203ENST00000504274 LEPROTL1O95214 131 aa1.22□□□□□ -2.21
COPS4-203ENST00000504274 HMGN3Q15651 99 aa1.22□□□□□ -2.21
COPS4-203ENST00000504274 SMIM11BQ8TCY0 68 aa1.22□□□□□ -2.21
COPS4-203ENST00000504274 SAMD9Q5K651 1589 aa1.21□□□□□ -2.22
COPS4-203ENST00000504274 ASXL1Q8IXJ9 1541 aa1.21□□□□□ -2.22
COPS4-203ENST00000504274 UBR3Q6ZT12 1888 aa1.21□□□□□ -2.22
COPS4-203ENST00000504274 KIF1AQ12756 1690 aa1.21□□□□□ -2.22
COPS4-203ENST00000504274 PLCH1Q4KWH8 1693 aa1.21□□□□□ -2.22
COPS4-203ENST00000504274 TRBV7-4A0A0J9YYF1 115 aa1.21□□□□□ -2.22
COPS4-203ENST00000504274 D6R8Y8 96 aa1.21□□□□□ -2.22
COPS4-203ENST00000504274 SMIM11AP58511 58 aa1.21□□□□□ -2.22
COPS4-203ENST00000504274 COX17Q14061 63 aa1.21□□□□□ -2.22
COPS4-203ENST00000504274 PLGLAQ15195 96 aa1.21□□□□□ -2.22
COPS4-203ENST00000504274 MUSTN1Q8IVN3 82 aa1.21□□□□□ -2.22
COPS4-203ENST00000504274 PAPPAQ13219 1627 aa1.21□□□□□ -2.22
COPS4-203ENST00000504274 COL6A6A6NMZ7 2263 aa1.2□□□□□ -2.22
COPS4-203ENST00000504274 DOT1LQ8TEK3 1739 aa1.2□□□□□ -2.22
COPS4-203ENST00000504274 CICQ96RK0 1608 aaPredicted RBP1.2□□□□□ -2.22
COPS4-203ENST00000504274 Q6JHZ5 121 aa1.2□□□□□ -2.22
COPS4-203ENST00000504274 TMEM263Q8WUH6 116 aaKnown RBP1.2□□□□□ -2.22
COPS4-203ENST00000504274 SMIM4Q8WVI0 70 aa1.2□□□□□ -2.22
COPS4-203ENST00000504274 CDC42BPGQ6DT37 1551 aa1.2□□□□□ -2.22
COPS4-203ENST00000504274 KNTC1P50748 2209 aa1.2□□□□□ -2.22
COPS4-203ENST00000504274 ASXL3Q9C0F0 2248 aa1.19□□□□□ -2.22
COPS4-203ENST00000504274 CEBPZOSA8MTT3 80 aa1.19□□□□□ -2.22
COPS4-203ENST00000504274 C6orf201Q7Z4U5 140 aa1.19□□□□□ -2.22
COPS4-203ENST00000504274 CFAP43Q8NDM7 1665 aa1.19□□□□□ -2.22
COPS4-203ENST00000504274 EFCAB5A4FU69 1503 aa1.19□□□□□ -2.22
COPS4-203ENST00000504274 DUOX2Q9NRD8 1548 aa1.19□□□□□ -2.22
COPS4-203ENST00000504274 QSER1Q2KHR3 1735 aa1.18□□□□□ -2.22
COPS4-203ENST00000504274 H0Y9P7 68 aa1.18□□□□□ -2.22
COPS4-203ENST00000504274 S100A3P33764 101 aa1.18□□□□□ -2.22
COPS4-203ENST00000504274 SPINK13Q1W4C9 94 aa1.18□□□□□ -2.22
COPS4-203ENST00000504274 C10orf95Q9H7T3 257 aa1.18□□□□□ -2.22
COPS4-203ENST00000504274 CCDC180Q9P1Z9 1646 aa1.18□□□□□ -2.22
COPS4-203ENST00000504274 EIF2AK4Q9P2K8 1649 aaKnown RBP1.18□□□□□ -2.22
COPS4-203ENST00000504274 ROS1P08922 2347 aa1.17□□□□□ -2.22
COPS4-203ENST00000504274 TULP4Q9NRJ4 1543 aa1.17□□□□□ -2.22
COPS4-203ENST00000504274 LINC00959A0A1B0GUT2 108 aa1.17□□□□□ -2.22
COPS4-203ENST00000504274 KIAA0556O60303 1618 aa1.16□□□□□ -2.22
COPS4-203ENST00000504274 SMIM13P0DJ93 91 aa1.16□□□□□ -2.22
COPS4-203ENST00000504274 HMGA1P17096 107 aaKnown RBP1.16□□□□□ -2.22
COPS4-203ENST00000504274 GLI2P10070 1586 aa1.16□□□□□ -2.22
COPS4-203ENST00000504274 LRRC7Q96NW7 1537 aa1.15□□□□□ -2.22
COPS4-203ENST00000504274 A0A0G2JMZ2 1700 aa1.15□□□□□ -2.22
COPS4-203ENST00000504274 TSC2P49815 1807 aa1.15□□□□□ -2.22
COPS4-203ENST00000504274 ANKRD17O75179 2603 aaKnown RBP1.15□□□□□ -2.23
COPS4-203ENST00000504274 GCHFRP30047 84 aa1.15□□□□□ -2.23
COPS4-203ENST00000504274 NKTRP30414 1462 aaKnown RBP1.15□□□□□ -2.23
COPS4-203ENST00000504274 NRAPQ86VF7 1730 aa1.15□□□□□ -2.23
COPS4-203ENST00000504274 FMN2Q9NZ56 1722 aa1.15□□□□□ -2.23
COPS4-203ENST00000504274 NESP48681 1621 aa1.15□□□□□ -2.23
COPS4-203ENST00000504274 DIP2AQ14689 1571 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms