RNA–Protein interactions for RNA: ENST00000503923.1

VCAN-205, Transcript of versican, humanhuman

TSL 4

Gene VCAN, Length 498 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-205ENST00000503923 CKS1BP61024 79 aa7.13□□□□□ -1.27
VCAN-205ENST00000503923 ODF1Q14990 250 aa7.13□□□□□ -1.27
VCAN-205ENST00000503923 TMEM170BQ5T4T1 132 aa7.13□□□□□ -1.27
VCAN-205ENST00000503923 C10orf25Q5T742 122 aa7.13□□□□□ -1.27
VCAN-205ENST00000503923 UNQ6190/PRO20217Q6UXQ8 127 aa7.13□□□□□ -1.27
VCAN-205ENST00000503923 TRBV30A0A0K0K1B3 111 aa7.12□□□□□ -1.27
VCAN-205ENST00000503923 LOC107984640A0A0U1RRK4 108 aa7.12□□□□□ -1.27
VCAN-205ENST00000503923 C2orf82Q6UX34 121 aa7.12□□□□□ -1.27
VCAN-205ENST00000503923 COX7B2Q8TF08 81 aa7.12□□□□□ -1.27
VCAN-205ENST00000503923 C6orf48Q9UBA6 75 aa7.12□□□□□ -1.27
VCAN-205ENST00000503923 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.12□□□□□ -1.27
VCAN-205ENST00000503923 IGLV5-39A0A0G2JS06 123 aa7.11□□□□□ -1.27
VCAN-205ENST00000503923 HAMPP81172 84 aa7.11□□□□□ -1.27
VCAN-205ENST00000503923 CIRBPQ14011 172 aaKnown RBP7.11□□□□□ -1.27
VCAN-205ENST00000503923 SCXQ7RTU7 201 aa7.11□□□□□ -1.27
VCAN-205ENST00000503923 SPACA4Q8TDM5 124 aa7.11□□□□□ -1.27
VCAN-205ENST00000503923 LINC00474Q9P2X8 69 aa7.11□□□□□ -1.27
VCAN-205ENST00000503923 A0A096LNI7 61 aa7.1□□□□□ -1.27
VCAN-205ENST00000503923 IGKV2-24A0A0C4DH68 120 aa7.1□□□□□ -1.27
VCAN-205ENST00000503923 TMEM223A0PJW6 202 aa7.1□□□□□ -1.27
VCAN-205ENST00000503923 PANO1I0J062 215 aa7.1□□□□□ -1.27
VCAN-205ENST00000503923 TLX1NBP0CAT3 122 aa7.1□□□□□ -1.27
VCAN-205ENST00000503923 CHTF8P0CG12 524 aa7.1□□□□□ -1.27
VCAN-205ENST00000503923 PLNP26678 52 aa7.1□□□□□ -1.27
VCAN-205ENST00000503923 CIRBP-AS1Q8TBR5 109 aa7.1□□□□□ -1.27
VCAN-205ENST00000503923 DPH3Q96FX2 82 aa7.1□□□□□ -1.27
VCAN-205ENST00000503923 SYS1-DBNDD2H3BUS1 97 aa7.09□□□□□ -1.27
VCAN-205ENST00000503923 DPM2O94777 84 aa7.09□□□□□ -1.27
VCAN-205ENST00000503923 S100A6P06703 90 aa7.09□□□□□ -1.27
VCAN-205ENST00000503923 PTTG1IPP53801 180 aa7.09□□□□□ -1.27
VCAN-205ENST00000503923 RPL18AQ02543 176 aaKnown RBP7.09□□□□□ -1.27
VCAN-205ENST00000503923 GAGE2BQ13066 116 aa7.09□□□□□ -1.27
VCAN-205ENST00000503923 MAJINQ3KP22 176 aa7.09□□□□□ -1.27
VCAN-205ENST00000503923 IGKCP01834 107 aa7.08□□□□□ -1.28
VCAN-205ENST00000503923 PET117Q6UWS5 81 aa7.08□□□□□ -1.28
VCAN-205ENST00000503923 PMCHL2Q9BQD1 86 aa7.08□□□□□ -1.28
VCAN-205ENST00000503923 A0A087WYN8 130 aa7.07□□□□□ -1.28
VCAN-205ENST00000503923 NDUFC2-KCTD14E9PQ53 114 aa7.07□□□□□ -1.28
VCAN-205ENST00000503923 C3orf79P0CE67 100 aa7.07□□□□□ -1.28
VCAN-205ENST00000503923 C9orf116Q5BN46 136 aaPredicted RBP7.07□□□□□ -1.28
VCAN-205ENST00000503923 SFTA2Q6UW10 78 aa7.07□□□□□ -1.28
VCAN-205ENST00000503923 Q8N1X5 172 aa7.07□□□□□ -1.28
VCAN-205ENST00000503923 SMR3BP02814 79 aaPredicted RBP7.06□□□□□ -1.28
VCAN-205ENST00000503923 S100A2P29034 98 aa7.06□□□□□ -1.28
VCAN-205ENST00000503923 KRTDAPP60985 99 aa7.06□□□□□ -1.28
VCAN-205ENST00000503923 HERVK_113P61574 105 aa7.06□□□□□ -1.28
VCAN-205ENST00000503923 LINC01545Q5VT33 79 aa7.06□□□□□ -1.28
VCAN-205ENST00000503923 Q6ZRP5 223 aa7.06□□□□□ -1.28
VCAN-205ENST00000503923 HIST3H2BBQ8N257 126 aa7.06□□□□□ -1.28
VCAN-205ENST00000503923 STPG4Q8N801 248 aa7.06□□□□□ -1.28
VCAN-205ENST00000503923 PLAC8Q9NZF1 115 aa7.06□□□□□ -1.28
VCAN-205ENST00000503923 FAT1Q14517 4588 aa7.06□□□□□ -1.28
VCAN-205ENST00000503923 GAGE2EQ4V326 116 aa7.05□□□□□ -1.28
VCAN-205ENST00000503923 GAGE2DQ9UEU5 116 aa7.05□□□□□ -1.28
VCAN-205ENST00000503923 FAM229AH3BQW9 127 aa7.04□□□□□ -1.28
VCAN-205ENST00000503923 LINC00528Q8N1L1 170 aa7.04□□□□□ -1.28
VCAN-205ENST00000503923 C20orf202A1L168 122 aa7.03□□□□□ -1.28
VCAN-205ENST00000503923 EPM2AB3EWF7 344 aa7.03□□□□□ -1.28
VCAN-205ENST00000503923 LEPROTO15243 131 aa7.03□□□□□ -1.28
VCAN-205ENST00000503923 SNRPEP62304 92 aaKnown RBP7.03□□□□□ -1.28
VCAN-205ENST00000503923 PLEKHB2Q96CS7 222 aa7.03□□□□□ -1.28
VCAN-205ENST00000503923 ZNF625Q96I27 306 aaPredicted RBP7.03□□□□□ -1.28
VCAN-205ENST00000503923 HIST1H2BLQ99880 126 aa7.03□□□□□ -1.28
VCAN-205ENST00000503923 KRTAP17-1Q9BYP8 105 aa7.03□□□□□ -1.28
VCAN-205ENST00000503923 Q5VSD8 79 aa7.02□□□□□ -1.29
VCAN-205ENST00000503923 A0A1W2PNN7 141 aa7.01□□□□□ -1.29
VCAN-205ENST00000503923 C5orf52A6NGY3 159 aa7.01□□□□□ -1.29
VCAN-205ENST00000503923 AKR1D1P51857 326 aa7.01□□□□□ -1.29
VCAN-205ENST00000503923 COX17Q14061 63 aa7.01□□□□□ -1.29
VCAN-205ENST00000503923 NDUFA12Q9UI09 145 aa7.01□□□□□ -1.29
VCAN-205ENST00000503923 ERG28Q9UKR5 140 aa7.01□□□□□ -1.29
VCAN-205ENST00000503923 MYMXA0A1B0GTQ4 84 aa7□□□□□ -1.29
VCAN-205ENST00000503923 E9PLD3 99 aa7□□□□□ -1.29
VCAN-205ENST00000503923 J3QQQ9 107 aa7□□□□□ -1.29
VCAN-205ENST00000503923 PLA2G1BP04054 148 aaKnown RBP7□□□□□ -1.29
VCAN-205ENST00000503923 LGALS3P17931 250 aaKnown RBP7□□□□□ -1.29
VCAN-205ENST00000503923 PFN2P35080 140 aa7□□□□□ -1.29
VCAN-205ENST00000503923 TSPEAR-AS2P59090 65 aa7□□□□□ -1.29
VCAN-205ENST00000503923 HERV-K104P63124 156 aa7□□□□□ -1.29
VCAN-205ENST00000503923 C9orf129Q5T035 196 aaKnown RBP7□□□□□ -1.29
VCAN-205ENST00000503923 C7orf33Q8WU49 177 aa7□□□□□ -1.29
VCAN-205ENST00000503923 VPS13BQ7Z7G8 4022 aa6.99□□□□□ -1.29
VCAN-205ENST00000503923 FAM168BA1KXE4 195 aa6.99□□□□□ -1.29
VCAN-205ENST00000503923 LINC00587B1AMM8 73 aa6.99□□□□□ -1.29
VCAN-205ENST00000503923 NMUP48645 174 aa6.99□□□□□ -1.29
VCAN-205ENST00000503923 XAGE1AQ9HD64 81 aa6.99□□□□□ -1.29
VCAN-205ENST00000503923 RPL37AP61513 92 aaKnown RBP6.98□□□□□ -1.29
VCAN-205ENST00000503923 MEIG1Q5JSS6 88 aa6.98□□□□□ -1.29
VCAN-205ENST00000503923 FAM19A5Q7Z5A7 132 aaPredicted RBP6.98□□□□□ -1.29
VCAN-205ENST00000503923 KRTAP4-5Q9BYR2 181 aa6.98□□□□□ -1.29
VCAN-205ENST00000503923 ABCA13Q86UQ4 5058 aa6.98□□□□□ -1.29
VCAN-205ENST00000503923 LINC00158P58513 81 aa6.97□□□□□ -1.29
VCAN-205ENST00000503923 SMIM13P0DJ93 91 aa6.96□□□□□ -1.3
VCAN-205ENST00000503923 PHF5AQ7RTV0 110 aaKnown RBP6.96□□□□□ -1.3
VCAN-205ENST00000503923 KRTAP7-1Q8IUC3 87 aa6.96□□□□□ -1.3
VCAN-205ENST00000503923 SND1-IT1Q9HBX3 110 aa6.96□□□□□ -1.3
VCAN-205ENST00000503923 A0A0U1RRA0 63 aa6.95□□□□□ -1.3
VCAN-205ENST00000503923 M0QXV9 152 aa6.95□□□□□ -1.3
VCAN-205ENST00000503923 SERTAD4-AS1Q5TG53 156 aa6.95□□□□□ -1.3
VCAN-205ENST00000503923 ATOH7Q8N100 152 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms