RNA–Protein interactions for RNA: ENST00000503282.1

UBE2D3-214, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-214ENST00000503282 C6orf48Q9UBA6 75 aa13.89□□□□□ -0.19
UBE2D3-214ENST00000503282 IGLV5-45A0A087WSX0 123 aa13.87□□□□□ -0.19
UBE2D3-214ENST00000503282 TRBV30A0A0K0K1B3 111 aa13.87□□□□□ -0.19
UBE2D3-214ENST00000503282 HSBP1O75506 76 aa13.87□□□□□ -0.19
UBE2D3-214ENST00000503282 C7orf33Q8WU49 177 aa13.86□□□□□ -0.19
UBE2D3-214ENST00000503282 H3BRM9 83 aa13.85□□□□□ -0.19
UBE2D3-214ENST00000503282 TLX1NBP0CAT3 122 aa13.85□□□□□ -0.19
UBE2D3-214ENST00000503282 SMIM1B2RUZ4 78 aa13.84□□□□□ -0.19
UBE2D3-214ENST00000503282 SCO1O75880 301 aa13.84□□□□□ -0.19
UBE2D3-214ENST00000503282 IGLC3P0DOY3 106 aa13.84□□□□□ -0.19
UBE2D3-214ENST00000503282 KRTAP10-4P60372 401 aaPredicted RBP13.84□□□□□ -0.19
UBE2D3-214ENST00000503282 SPINK8P0C7L1 97 aa13.82□□□□□ -0.2
UBE2D3-214ENST00000503282 Q6ZRP5 223 aa13.82□□□□□ -0.2
UBE2D3-214ENST00000503282 FAM19A2Q8N3H0 131 aa13.82□□□□□ -0.2
UBE2D3-214ENST00000503282 CXCL5P42830 114 aa13.81□□□□□ -0.2
UBE2D3-214ENST00000503282 COX7B2Q8TF08 81 aa13.81□□□□□ -0.2
UBE2D3-214ENST00000503282 IFI27L1Q96BM0 104 aa13.81□□□□□ -0.2
UBE2D3-214ENST00000503282 NDUFC2-KCTD14E9PQ53 114 aa13.8□□□□□ -0.2
UBE2D3-214ENST00000503282 F8VRH5 84 aa13.8□□□□□ -0.2
UBE2D3-214ENST00000503282 GAGE2EQ4V326 116 aa13.8□□□□□ -0.2
UBE2D3-214ENST00000503282 C9orf116Q5BN46 136 aaPredicted RBP13.8□□□□□ -0.2
UBE2D3-214ENST00000503282 GAGE2DQ9UEU5 116 aa13.8□□□□□ -0.2
UBE2D3-214ENST00000503282 A0A1W2PNN7 141 aa13.79□□□□□ -0.2
UBE2D3-214ENST00000503282 SERF1AO75920 110 aa13.79□□□□□ -0.2
UBE2D3-214ENST00000503282 CHTOPQ9Y3Y2 248 aaKnown RBP13.79□□□□□ -0.2
UBE2D3-214ENST00000503282 ZNF22P17026 224 aaPredicted RBP13.77□□□□□ -0.21
UBE2D3-214ENST00000503282 TRAV12-1A0A0B4J245 112 aa13.76□□□□□ -0.21
UBE2D3-214ENST00000503282 TMEM170BQ5T4T1 132 aa13.76□□□□□ -0.21
UBE2D3-214ENST00000503282 C11orf86A6NJI1 115 aa13.75□□□□□ -0.21
UBE2D3-214ENST00000503282 LEPROTL1O95214 131 aa13.75□□□□□ -0.21
UBE2D3-214ENST00000503282 LINC00310P59036 64 aa13.75□□□□□ -0.21
UBE2D3-214ENST00000503282 IGLV5-39A0A0G2JS06 123 aa13.72□□□□□ -0.21
UBE2D3-214ENST00000503282 NUPR1O60356 82 aa13.72□□□□□ -0.21
UBE2D3-214ENST00000503282 FAM168BA1KXE4 195 aa13.71□□□□□ -0.21
UBE2D3-214ENST00000503282 H0Y8G0 127 aa13.7□□□□□ -0.22
UBE2D3-214ENST00000503282 FAM19A5Q7Z5A7 132 aaPredicted RBP13.7□□□□□ -0.22
UBE2D3-214ENST00000503282 HSPB8Q9UJY1 196 aa13.7□□□□□ -0.22
UBE2D3-214ENST00000503282 FLG2Q5D862 2391 aaPredicted RBP13.69□□□□□ -0.22
UBE2D3-214ENST00000503282 FABP4P15090 132 aa13.69□□□□□ -0.22
UBE2D3-214ENST00000503282 HNRNPA3P51991 378 aaKnown RBP13.69□□□□□ -0.22
UBE2D3-214ENST00000503282 PRR3P79522 188 aaKnown RBP13.69□□□□□ -0.22
UBE2D3-214ENST00000503282 C9orf129Q5T035 196 aaKnown RBP13.69□□□□□ -0.22
UBE2D3-214ENST00000503282 PHF5AQ7RTV0 110 aaKnown RBP13.69□□□□□ -0.22
UBE2D3-214ENST00000503282 HIST1H2BKO60814 126 aa13.68□□□□□ -0.22
UBE2D3-214ENST00000503282 HIST1H2BJP06899 126 aa13.68□□□□□ -0.22
UBE2D3-214ENST00000503282 HIST1H2BOP23527 126 aa13.68□□□□□ -0.22
UBE2D3-214ENST00000503282 HIST1H2BBP33778 126 aa13.68□□□□□ -0.22
UBE2D3-214ENST00000503282 HIST1H2BDP58876 126 aa13.68□□□□□ -0.22
UBE2D3-214ENST00000503282 HIST1H2BCP62807 126 aa13.68□□□□□ -0.22
UBE2D3-214ENST00000503282 HIST2H2BEQ16778 126 aa13.68□□□□□ -0.22
UBE2D3-214ENST00000503282 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.68□□□□□ -0.22
UBE2D3-214ENST00000503282 HIST1H2BHQ93079 126 aa13.68□□□□□ -0.22
UBE2D3-214ENST00000503282 HIST1H2BNQ99877 126 aa13.68□□□□□ -0.22
UBE2D3-214ENST00000503282 HIST1H2BMQ99879 126 aa13.68□□□□□ -0.22
UBE2D3-214ENST00000503282 XAGE1AQ9HD64 81 aa13.66□□□□□ -0.22
UBE2D3-214ENST00000503282 MYCBP2O75592 4640 aa13.66□□□□□ -0.22
UBE2D3-214ENST00000503282 TMEM223A0PJW6 202 aa13.65□□□□□ -0.22
UBE2D3-214ENST00000503282 ODF1Q14990 250 aa13.65□□□□□ -0.22
UBE2D3-214ENST00000503282 J3QL48 77 aa13.63□□□□□ -0.23
UBE2D3-214ENST00000503282 M0QXV9 152 aa13.63□□□□□ -0.23
UBE2D3-214ENST00000503282 S100A1P23297 94 aa13.63□□□□□ -0.23
UBE2D3-214ENST00000503282 SFTA2Q6UW10 78 aa13.63□□□□□ -0.23
UBE2D3-214ENST00000503282 KRTAP7-1Q8IUC3 87 aa13.63□□□□□ -0.23
UBE2D3-214ENST00000503282 KRTAP29-1A8MX34 341 aaPredicted RBP13.62□□□□□ -0.23
UBE2D3-214ENST00000503282 PFN2P35080 140 aa13.61□□□□□ -0.23
UBE2D3-214ENST00000503282 MAP1LC3CQ9BXW4 147 aa13.61□□□□□ -0.23
UBE2D3-214ENST00000503282 PSORS1C2Q9UIG4 136 aa13.61□□□□□ -0.23
UBE2D3-214ENST00000503282 PKHD1L1Q86WI1 4243 aa13.61□□□□□ -0.23
UBE2D3-214ENST00000503282 OXTP01178 125 aa13.6□□□□□ -0.23
UBE2D3-214ENST00000503282 ZNF625Q96I27 306 aaPredicted RBP13.6□□□□□ -0.23
UBE2D3-214ENST00000503282 PLNP26678 52 aa13.59□□□□□ -0.23
UBE2D3-214ENST00000503282 UBE2BP63146 152 aa13.59□□□□□ -0.23
UBE2D3-214ENST00000503282 SERTAD4-AS1Q5TG53 156 aa13.59□□□□□ -0.23
UBE2D3-214ENST00000503282 ERG28Q9UKR5 140 aa13.59□□□□□ -0.23
UBE2D3-214ENST00000503282 COX17Q14061 63 aa13.58□□□□□ -0.24
UBE2D3-214ENST00000503282 C1orf137Q5JT78 98 aa13.57□□□□□ -0.24
UBE2D3-214ENST00000503282 C22orf24Q9Y442 160 aa13.57□□□□□ -0.24
UBE2D3-214ENST00000503282 DPM2O94777 84 aa13.56□□□□□ -0.24
UBE2D3-214ENST00000503282 SPINK6Q6UWN8 80 aa13.56□□□□□ -0.24
UBE2D3-214ENST00000503282 ATP6V1G1O75348 118 aa13.55□□□□□ -0.24
UBE2D3-214ENST00000503282 LBHQ53QV2 105 aaPredicted RBP13.55□□□□□ -0.24
UBE2D3-214ENST00000503282 PMCHL2Q9BQD1 86 aa13.55□□□□□ -0.24
UBE2D3-214ENST00000503282 IGKCP01834 107 aa13.54□□□□□ -0.24
UBE2D3-214ENST00000503282 KRTAP11-1Q8IUC1 163 aa13.54□□□□□ -0.24
UBE2D3-214ENST00000503282 PLA2G2DQ9UNK4 145 aa13.54□□□□□ -0.24
UBE2D3-214ENST00000503282 SRSF9Q13242 221 aaKnown RBP eCLIP13.53□□□□□ -0.24
UBE2D3-214ENST00000503282 COA6Q5JTJ3 125 aaKnown RBP13.52□□□□□ -0.25
UBE2D3-214ENST00000503282 TP73-AS1Q9UF72 201 aa13.52□□□□□ -0.25
UBE2D3-214ENST00000503282 DMBT1Q9UGM3 2413 aaPredicted RBP13.51□□□□□ -0.25
UBE2D3-214ENST00000503282 SYS1-DBNDD2H3BUS1 97 aa13.51□□□□□ -0.25
UBE2D3-214ENST00000503282 LINC00158P58513 81 aa13.51□□□□□ -0.25
UBE2D3-214ENST00000503282 HERVK_113P61574 105 aa13.51□□□□□ -0.25
UBE2D3-214ENST00000503282 MRPL55Q7Z7F7 128 aaKnown RBP13.51□□□□□ -0.25
UBE2D3-214ENST00000503282 SND1-IT1Q9HBX3 110 aa13.51□□□□□ -0.25
UBE2D3-214ENST00000503282 HERV-K104P63124 156 aa13.5□□□□□ -0.25
UBE2D3-214ENST00000503282 LRP1Q07954 4544 aaKnown RBP13.5□□□□□ -0.25
UBE2D3-214ENST00000503282 LEPROTO15243 131 aa13.49□□□□□ -0.25
UBE2D3-214ENST00000503282 IGLV7-43P04211 117 aa13.49□□□□□ -0.25
UBE2D3-214ENST00000503282 NKAPP1Q8N9T2 125 aa13.49□□□□□ -0.25
UBE2D3-214ENST00000503282 PLEKHB2Q96CS7 222 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 170 ms