RNA–Protein interactions for RNA: ENST00000502557.5

CCHCR1-216, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 662 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-216ENST00000502557 H3BRM9 83 aa11.36□□□□□ -0.59
CCHCR1-216ENST00000502557 SMR3BP02814 79 aaPredicted RBP11.36□□□□□ -0.59
CCHCR1-216ENST00000502557 PRSS2P07478 247 aa11.36□□□□□ -0.59
CCHCR1-216ENST00000502557 FABP4P15090 132 aa11.36□□□□□ -0.59
CCHCR1-216ENST00000502557 SPACA4Q8TDM5 124 aa11.36□□□□□ -0.59
CCHCR1-216ENST00000502557 HSPB8Q9UJY1 196 aa11.36□□□□□ -0.59
CCHCR1-216ENST00000502557 PKIGQ9Y2B9 76 aa11.36□□□□□ -0.59
CCHCR1-216ENST00000502557 LOC107984640A0A0U1RRK4 108 aa11.35□□□□□ -0.59
CCHCR1-216ENST00000502557 C6orf226Q5I0X4 101 aa11.35□□□□□ -0.59
CCHCR1-216ENST00000502557 C6orf48Q9UBA6 75 aa11.35□□□□□ -0.59
CCHCR1-216ENST00000502557 IGKV2-24A0A0C4DH68 120 aa11.34□□□□□ -0.59
CCHCR1-216ENST00000502557 COA6Q5JTJ3 125 aaKnown RBP11.34□□□□□ -0.59
CCHCR1-216ENST00000502557 F8VRH5 84 aa11.33□□□□□ -0.6
CCHCR1-216ENST00000502557 H0Y8G0 127 aa11.33□□□□□ -0.6
CCHCR1-216ENST00000502557 MAJINQ3KP22 176 aa11.33□□□□□ -0.6
CCHCR1-216ENST00000502557 COX7B2Q8TF08 81 aa11.33□□□□□ -0.6
CCHCR1-216ENST00000502557 DPH3Q96FX2 82 aa11.33□□□□□ -0.6
CCHCR1-216ENST00000502557 IGLV5-39A0A0G2JS06 123 aa11.32□□□□□ -0.6
CCHCR1-216ENST00000502557 TRBV30A0A0K0K1B3 111 aa11.32□□□□□ -0.6
CCHCR1-216ENST00000502557 CKS1BP61024 79 aa11.32□□□□□ -0.6
CCHCR1-216ENST00000502557 GAGE2BQ13066 116 aa11.32□□□□□ -0.6
CCHCR1-216ENST00000502557 ODF1Q14990 250 aa11.32□□□□□ -0.6
CCHCR1-216ENST00000502557 TMEM170BQ5T4T1 132 aa11.32□□□□□ -0.6
CCHCR1-216ENST00000502557 KRTAP4-5Q9BYR2 181 aa11.32□□□□□ -0.6
CCHCR1-216ENST00000502557 A0A087WYN8 130 aa11.31□□□□□ -0.6
CCHCR1-216ENST00000502557 PTTG1IPP53801 180 aa11.31□□□□□ -0.6
CCHCR1-216ENST00000502557 CXCL5P42830 114 aa11.3□□□□□ -0.6
CCHCR1-216ENST00000502557 RPL18AQ02543 176 aaKnown RBP11.3□□□□□ -0.6
CCHCR1-216ENST00000502557 LINC00474Q9P2X8 69 aa11.3□□□□□ -0.6
CCHCR1-216ENST00000502557 TLX1NBP0CAT3 122 aa11.29□□□□□ -0.6
CCHCR1-216ENST00000502557 C9orf116Q5BN46 136 aaPredicted RBP11.29□□□□□ -0.6
CCHCR1-216ENST00000502557 PLAC8Q9NZF1 115 aa11.29□□□□□ -0.6
CCHCR1-216ENST00000502557 Q5VSD8 79 aa11.28□□□□□ -0.6
CCHCR1-216ENST00000502557 LINC00528Q8N1L1 170 aa11.28□□□□□ -0.6
CCHCR1-216ENST00000502557 STPG4Q8N801 248 aa11.28□□□□□ -0.6
CCHCR1-216ENST00000502557 MAP1LC3CQ9BXW4 147 aa11.28□□□□□ -0.6
CCHCR1-216ENST00000502557 TMEM223A0PJW6 202 aa11.27□□□□□ -0.61
CCHCR1-216ENST00000502557 EPM2AB3EWF7 344 aa11.27□□□□□ -0.61
CCHCR1-216ENST00000502557 Q6ZRP5 223 aa11.27□□□□□ -0.61
CCHCR1-216ENST00000502557 FAM229AH3BQW9 127 aa11.26□□□□□ -0.61
CCHCR1-216ENST00000502557 NDUFC2-KCTD14E9PQ53 114 aa11.25□□□□□ -0.61
CCHCR1-216ENST00000502557 PMCHL2Q9BQD1 86 aa11.25□□□□□ -0.61
CCHCR1-216ENST00000502557 PLNP26678 52 aa11.24□□□□□ -0.61
CCHCR1-216ENST00000502557 GAGE2EQ4V326 116 aa11.24□□□□□ -0.61
CCHCR1-216ENST00000502557 GAGE2DQ9UEU5 116 aa11.24□□□□□ -0.61
CCHCR1-216ENST00000502557 FAT1Q14517 4588 aa11.23□□□□□ -0.61
CCHCR1-216ENST00000502557 SYS1-DBNDD2H3BUS1 97 aa11.23□□□□□ -0.61
CCHCR1-216ENST00000502557 DPM2O94777 84 aa11.23□□□□□ -0.61
CCHCR1-216ENST00000502557 A0A1W2PNN7 141 aa11.22□□□□□ -0.61
CCHCR1-216ENST00000502557 IGKCP01834 107 aa11.21□□□□□ -0.61
CCHCR1-216ENST00000502557 C3orf79P0CE67 100 aa11.2□□□□□ -0.62
CCHCR1-216ENST00000502557 PET117Q6UWS5 81 aa11.2□□□□□ -0.62
CCHCR1-216ENST00000502557 PLA2G1BP04054 148 aaKnown RBP11.19□□□□□ -0.62
CCHCR1-216ENST00000502557 C9orf129Q5T035 196 aaKnown RBP11.19□□□□□ -0.62
CCHCR1-216ENST00000502557 LINC01545Q5VT33 79 aa11.19□□□□□ -0.62
CCHCR1-216ENST00000502557 ZNF625Q96I27 306 aaPredicted RBP11.19□□□□□ -0.62
CCHCR1-216ENST00000502557 FAM168BA1KXE4 195 aa11.18□□□□□ -0.62
CCHCR1-216ENST00000502557 KRTAP10-4P60372 401 aaPredicted RBP11.18□□□□□ -0.62
CCHCR1-216ENST00000502557 RPL37AP61513 92 aaKnown RBP11.17□□□□□ -0.62
CCHCR1-216ENST00000502557 SFTA2Q6UW10 78 aa11.17□□□□□ -0.62
CCHCR1-216ENST00000502557 HIST3H2BBQ8N257 126 aa11.17□□□□□ -0.62
CCHCR1-216ENST00000502557 KRTDAPP60985 99 aa11.16□□□□□ -0.62
CCHCR1-216ENST00000502557 KRTAP7-1Q8IUC3 87 aa11.16□□□□□ -0.62
CCHCR1-216ENST00000502557 C7orf33Q8WU49 177 aa11.16□□□□□ -0.62
CCHCR1-216ENST00000502557 XAGE1AQ9HD64 81 aa11.16□□□□□ -0.62
CCHCR1-216ENST00000502557 LEPROTO15243 131 aa11.15□□□□□ -0.62
CCHCR1-216ENST00000502557 HERVK_113P61574 105 aa11.15□□□□□ -0.62
CCHCR1-216ENST00000502557 S100A6P06703 90 aa11.14□□□□□ -0.63
CCHCR1-216ENST00000502557 PFN2P35080 140 aa11.14□□□□□ -0.63
CCHCR1-216ENST00000502557 TSPEAR-AS2P59090 65 aa11.14□□□□□ -0.63
CCHCR1-216ENST00000502557 FAM19A5Q7Z5A7 132 aaPredicted RBP11.14□□□□□ -0.63
CCHCR1-216ENST00000502557 PLEKHB2Q96CS7 222 aa11.14□□□□□ -0.63
CCHCR1-216ENST00000502557 ERG28Q9UKR5 140 aa11.14□□□□□ -0.63
CCHCR1-216ENST00000502557 ABCA13Q86UQ4 5058 aa11.13□□□□□ -0.63
CCHCR1-216ENST00000502557 HIST1H2BLQ99880 126 aa11.13□□□□□ -0.63
CCHCR1-216ENST00000502557 NDUFA12Q9UI09 145 aa11.13□□□□□ -0.63
CCHCR1-216ENST00000502557 S100A2P29034 98 aa11.12□□□□□ -0.63
CCHCR1-216ENST00000502557 PHF5AQ7RTV0 110 aaKnown RBP11.12□□□□□ -0.63
CCHCR1-216ENST00000502557 J3QQQ9 107 aa11.11□□□□□ -0.63
CCHCR1-216ENST00000502557 INAFM2P0DMQ5 153 aa11.11□□□□□ -0.63
CCHCR1-216ENST00000502557 COX17Q14061 63 aa11.11□□□□□ -0.63
CCHCR1-216ENST00000502557 SERTAD4-AS1Q5TG53 156 aa11.11□□□□□ -0.63
CCHCR1-216ENST00000502557 VPS13BQ7Z7G8 4022 aa11.1□□□□□ -0.63
CCHCR1-216ENST00000502557 SNRPEP62304 92 aaKnown RBP11.1□□□□□ -0.63
CCHCR1-216ENST00000502557 HERV-K104P63124 156 aa11.1□□□□□ -0.63
CCHCR1-216ENST00000502557 MYMXA0A1B0GTQ4 84 aa11.09□□□□□ -0.63
CCHCR1-216ENST00000502557 C20orf202A1L168 122 aa11.09□□□□□ -0.63
CCHCR1-216ENST00000502557 E9PLD3 99 aa11.09□□□□□ -0.63
CCHCR1-216ENST00000502557 M0QXV9 152 aa11.09□□□□□ -0.63
CCHCR1-216ENST00000502557 LGALS3P17931 250 aaKnown RBP11.08□□□□□ -0.64
CCHCR1-216ENST00000502557 LINC00158P58513 81 aa11.08□□□□□ -0.64
CCHCR1-216ENST00000502557 SND1-IT1Q9HBX3 110 aa11.08□□□□□ -0.64
CCHCR1-216ENST00000502557 C5orf52A6NGY3 159 aa11.07□□□□□ -0.64
CCHCR1-216ENST00000502557 NMUP48645 174 aa11.07□□□□□ -0.64
CCHCR1-216ENST00000502557 PRR3P79522 188 aaKnown RBP11.07□□□□□ -0.64
CCHCR1-216ENST00000502557 A0A0U1RRA0 63 aa11.06□□□□□ -0.64
CCHCR1-216ENST00000502557 SMIM13P0DJ93 91 aa11.06□□□□□ -0.64
CCHCR1-216ENST00000502557 HNRNPA3P51991 378 aaKnown RBP11.06□□□□□ -0.64
CCHCR1-216ENST00000502557 PLA2G2DQ9UNK4 145 aa11.06□□□□□ -0.64
CCHCR1-216ENST00000502557 C22orf24Q9Y442 160 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms