RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.67□□□□□ -0.7
PRKCB-210ENST00000498739 C2orf82Q6UX34 121 aa10.67□□□□□ -0.7
PRKCB-210ENST00000498739 Q8IZM0 81 aa10.67□□□□□ -0.7
PRKCB-210ENST00000498739 LINC00528Q8N1L1 170 aa10.67□□□□□ -0.7
PRKCB-210ENST00000498739 HIST1H2BHQ93079 126 aa10.67□□□□□ -0.7
PRKCB-210ENST00000498739 HIST1H2BNQ99877 126 aa10.67□□□□□ -0.7
PRKCB-210ENST00000498739 HIST1H2BMQ99879 126 aa10.67□□□□□ -0.7
PRKCB-210ENST00000498739 A0A087WYN8 130 aa10.66□□□□□ -0.7
PRKCB-210ENST00000498739 SPINK8P0C7L1 97 aa10.66□□□□□ -0.7
PRKCB-210ENST00000498739 RPL18AQ02543 176 aaKnown RBP10.66□□□□□ -0.7
PRKCB-210ENST00000498739 GAGE2BQ13066 116 aa10.66□□□□□ -0.7
PRKCB-210ENST00000498739 C6orf48Q9UBA6 75 aa10.66□□□□□ -0.7
PRKCB-210ENST00000498739 CHTOPQ9Y3Y2 248 aaKnown RBP10.66□□□□□ -0.7
PRKCB-210ENST00000498739 H3BRM9 83 aa10.65□□□□□ -0.7
PRKCB-210ENST00000498739 LEPROTL1O95214 131 aa10.65□□□□□ -0.7
PRKCB-210ENST00000498739 CKS1BP61024 79 aa10.65□□□□□ -0.7
PRKCB-210ENST00000498739 LINC00474Q9P2X8 69 aa10.65□□□□□ -0.7
PRKCB-210ENST00000498739 TRAV12-1A0A0B4J245 112 aa10.64□□□□□ -0.71
PRKCB-210ENST00000498739 ZNF22P17026 224 aaPredicted RBP10.64□□□□□ -0.71
PRKCB-210ENST00000498739 PTTG1IPP53801 180 aa10.64□□□□□ -0.71
PRKCB-210ENST00000498739 TRBV30A0A0K0K1B3 111 aa10.63□□□□□ -0.71
PRKCB-210ENST00000498739 C11orf86A6NJI1 115 aa10.63□□□□□ -0.71
PRKCB-210ENST00000498739 H0Y8G0 127 aa10.63□□□□□ -0.71
PRKCB-210ENST00000498739 STPG4Q8N801 248 aa10.63□□□□□ -0.71
PRKCB-210ENST00000498739 COX7B2Q8TF08 81 aa10.63□□□□□ -0.71
PRKCB-210ENST00000498739 FABP4P15090 132 aa10.62□□□□□ -0.71
PRKCB-210ENST00000498739 TMEM170BQ5T4T1 132 aa10.62□□□□□ -0.71
PRKCB-210ENST00000498739 PLAC8Q9NZF1 115 aa10.62□□□□□ -0.71
PRKCB-210ENST00000498739 FAT1Q14517 4588 aa10.62□□□□□ -0.71
PRKCB-210ENST00000498739 CXCL5P42830 114 aa10.61□□□□□ -0.71
PRKCB-210ENST00000498739 HSPB8Q9UJY1 196 aa10.61□□□□□ -0.71
PRKCB-210ENST00000498739 F8VRH5 84 aa10.6□□□□□ -0.71
PRKCB-210ENST00000498739 PLA2G1BP04054 148 aaKnown RBP10.6□□□□□ -0.71
PRKCB-210ENST00000498739 TLX1NBP0CAT3 122 aa10.6□□□□□ -0.71
PRKCB-210ENST00000498739 C9orf116Q5BN46 136 aaPredicted RBP10.6□□□□□ -0.71
PRKCB-210ENST00000498739 Q6ZRP5 223 aa10.59□□□□□ -0.71
PRKCB-210ENST00000498739 GAGE2EQ4V326 116 aa10.58□□□□□ -0.72
PRKCB-210ENST00000498739 GAGE2DQ9UEU5 116 aa10.58□□□□□ -0.72
PRKCB-210ENST00000498739 ABCA13Q86UQ4 5058 aa10.57□□□□□ -0.72
PRKCB-210ENST00000498739 IGLV5-39A0A0G2JS06 123 aa10.57□□□□□ -0.72
PRKCB-210ENST00000498739 NDUFC2-KCTD14E9PQ53 114 aa10.57□□□□□ -0.72
PRKCB-210ENST00000498739 ODF1Q14990 250 aa10.57□□□□□ -0.72
PRKCB-210ENST00000498739 RPL37AP61513 92 aaKnown RBP10.55□□□□□ -0.72
PRKCB-210ENST00000498739 C7orf33Q8WU49 177 aa10.55□□□□□ -0.72
PRKCB-210ENST00000498739 MAP1LC3CQ9BXW4 147 aa10.55□□□□□ -0.72
PRKCB-210ENST00000498739 A0A1W2PNN7 141 aa10.54□□□□□ -0.72
PRKCB-210ENST00000498739 TMEM223A0PJW6 202 aa10.54□□□□□ -0.72
PRKCB-210ENST00000498739 INAFM2P0DMQ5 153 aa10.54□□□□□ -0.72
PRKCB-210ENST00000498739 PCLOQ9Y6V0 5065 aa10.52□□□□□ -0.73
PRKCB-210ENST00000498739 COA6Q5JTJ3 125 aaKnown RBP10.52□□□□□ -0.73
PRKCB-210ENST00000498739 PMCHL2Q9BQD1 86 aa10.52□□□□□ -0.73
PRKCB-210ENST00000498739 VPS13BQ7Z7G8 4022 aa10.52□□□□□ -0.73
PRKCB-210ENST00000498739 FAM168BA1KXE4 195 aa10.51□□□□□ -0.73
PRKCB-210ENST00000498739 PLNP26678 52 aa10.51□□□□□ -0.73
PRKCB-210ENST00000498739 KRTAP10-4P60372 401 aaPredicted RBP10.51□□□□□ -0.73
PRKCB-210ENST00000498739 DPM2O94777 84 aa10.5□□□□□ -0.73
PRKCB-210ENST00000498739 C9orf129Q5T035 196 aaKnown RBP10.5□□□□□ -0.73
PRKCB-210ENST00000498739 FAM19A5Q7Z5A7 132 aaPredicted RBP10.5□□□□□ -0.73
PRKCB-210ENST00000498739 IGKCP01834 107 aa10.49□□□□□ -0.73
PRKCB-210ENST00000498739 XAGE1AQ9HD64 81 aa10.49□□□□□ -0.73
PRKCB-210ENST00000498739 SYS1-DBNDD2H3BUS1 97 aa10.48□□□□□ -0.73
PRKCB-210ENST00000498739 PHF5AQ7RTV0 110 aaKnown RBP10.48□□□□□ -0.73
PRKCB-210ENST00000498739 ZNF625Q96I27 306 aaPredicted RBP10.48□□□□□ -0.73
PRKCB-210ENST00000498739 PFN2P35080 140 aa10.47□□□□□ -0.73
PRKCB-210ENST00000498739 SFTA2Q6UW10 78 aa10.47□□□□□ -0.73
PRKCB-210ENST00000498739 ERG28Q9UKR5 140 aa10.46□□□□□ -0.73
PRKCB-210ENST00000498739 HERVK_113P61574 105 aa10.45□□□□□ -0.74
PRKCB-210ENST00000498739 KRTAP7-1Q8IUC3 87 aa10.45□□□□□ -0.74
PRKCB-210ENST00000498739 M0QXV9 152 aa10.44□□□□□ -0.74
PRKCB-210ENST00000498739 C3orf79P0CE67 100 aa10.44□□□□□ -0.74
PRKCB-210ENST00000498739 PET117Q6UWS5 81 aa10.44□□□□□ -0.74
PRKCB-210ENST00000498739 LEPROTO15243 131 aa10.43□□□□□ -0.74
PRKCB-210ENST00000498739 KRTDAPP60985 99 aa10.43□□□□□ -0.74
PRKCB-210ENST00000498739 PRR3P79522 188 aaKnown RBP10.43□□□□□ -0.74
PRKCB-210ENST00000498739 SERTAD4-AS1Q5TG53 156 aa10.43□□□□□ -0.74
PRKCB-210ENST00000498739 SRRM2Q9UQ35 2752 aaKnown RBP10.42□□□□□ -0.74
PRKCB-210ENST00000498739 HNRNPA3P51991 378 aaKnown RBP10.42□□□□□ -0.74
PRKCB-210ENST00000498739 COX17Q14061 63 aa10.42□□□□□ -0.74
PRKCB-210ENST00000498739 LINC01545Q5VT33 79 aa10.42□□□□□ -0.74
PRKCB-210ENST00000498739 PLEKHB2Q96CS7 222 aa10.42□□□□□ -0.74
PRKCB-210ENST00000498739 TSPEAR-AS2P59090 65 aa10.41□□□□□ -0.74
PRKCB-210ENST00000498739 NDUFA12Q9UI09 145 aa10.41□□□□□ -0.74
PRKCB-210ENST00000498739 A0A0U1RRA0 63 aa10.4□□□□□ -0.74
PRKCB-210ENST00000498739 S100A6P06703 90 aa10.4□□□□□ -0.74
PRKCB-210ENST00000498739 LINC00158P58513 81 aa10.4□□□□□ -0.74
PRKCB-210ENST00000498739 HERV-K104P63124 156 aa10.4□□□□□ -0.74
PRKCB-210ENST00000498739 UBE2BP63146 152 aa10.4□□□□□ -0.74
PRKCB-210ENST00000498739 MEIG1Q5JSS6 88 aa10.4□□□□□ -0.74
PRKCB-210ENST00000498739 MYMXA0A1B0GTQ4 84 aa10.39□□□□□ -0.75
PRKCB-210ENST00000498739 J3QQQ9 107 aa10.39□□□□□ -0.75
PRKCB-210ENST00000498739 PSORS1C2Q9UIG4 136 aa10.39□□□□□ -0.75
PRKCB-210ENST00000498739 C22orf24Q9Y442 160 aa10.39□□□□□ -0.75
PRKCB-210ENST00000498739 LGALS3P17931 250 aaKnown RBP10.38□□□□□ -0.75
PRKCB-210ENST00000498739 S100A2P29034 98 aa10.38□□□□□ -0.75
PRKCB-210ENST00000498739 HIST3H2BBQ8N257 126 aa10.38□□□□□ -0.75
PRKCB-210ENST00000498739 SND1-IT1Q9HBX3 110 aa10.38□□□□□ -0.75
PRKCB-210ENST00000498739 C20orf202A1L168 122 aa10.37□□□□□ -0.75
PRKCB-210ENST00000498739 SMIM13P0DJ93 91 aa10.37□□□□□ -0.75
PRKCB-210ENST00000498739 KRTAP11-1Q8IUC1 163 aa10.37□□□□□ -0.75
PRKCB-210ENST00000498739 PLA2G2DQ9UNK4 145 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms