RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 DPH3Q96FX2 82 aa10.25□□□□□ -0.77
SSBP1-214ENST00000498107 ODF1Q14990 250 aa10.24□□□□□ -0.77
SSBP1-214ENST00000498107 DNAH8Q96JB1 4490 aa10.24□□□□□ -0.77
SSBP1-214ENST00000498107 PCLOQ9Y6V0 5065 aa10.24□□□□□ -0.77
SSBP1-214ENST00000498107 APOBP04114 4563 aaKnown RBP10.23□□□□□ -0.77
SSBP1-214ENST00000498107 RYR1P21817 5038 aa10.23□□□□□ -0.77
SSBP1-214ENST00000498107 PLNP26678 52 aa10.23□□□□□ -0.77
SSBP1-214ENST00000498107 CIRBPQ14011 172 aaKnown RBP10.23□□□□□ -0.77
SSBP1-214ENST00000498107 C2orf82Q6UX34 121 aa10.23□□□□□ -0.77
SSBP1-214ENST00000498107 IGLV5-39A0A0G2JS06 123 aa10.22□□□□□ -0.77
SSBP1-214ENST00000498107 C10orf25Q5T742 122 aa10.22□□□□□ -0.77
SSBP1-214ENST00000498107 SCXQ7RTU7 201 aa10.22□□□□□ -0.77
SSBP1-214ENST00000498107 SPACA4Q8TDM5 124 aa10.22□□□□□ -0.77
SSBP1-214ENST00000498107 C6orf48Q9UBA6 75 aa10.22□□□□□ -0.77
SSBP1-214ENST00000498107 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.22□□□□□ -0.77
SSBP1-214ENST00000498107 IGKV2-24A0A0C4DH68 120 aa10.21□□□□□ -0.77
SSBP1-214ENST00000498107 S100A6P06703 90 aa10.21□□□□□ -0.77
SSBP1-214ENST00000498107 TLX1NBP0CAT3 122 aa10.21□□□□□ -0.77
SSBP1-214ENST00000498107 SFTA2Q6UW10 78 aa10.21□□□□□ -0.77
SSBP1-214ENST00000498107 A0A096LNI7 61 aa10.2□□□□□ -0.78
SSBP1-214ENST00000498107 SYS1-DBNDD2H3BUS1 97 aa10.2□□□□□ -0.78
SSBP1-214ENST00000498107 DPM2O94777 84 aa10.2□□□□□ -0.78
SSBP1-214ENST00000498107 PTTG1IPP53801 180 aa10.2□□□□□ -0.78
SSBP1-214ENST00000498107 RPL18AQ02543 176 aaKnown RBP10.2□□□□□ -0.78
SSBP1-214ENST00000498107 GAGE2BQ13066 116 aa10.2□□□□□ -0.78
SSBP1-214ENST00000498107 MAJINQ3KP22 176 aa10.2□□□□□ -0.78
SSBP1-214ENST00000498107 CIRBP-AS1Q8TBR5 109 aa10.2□□□□□ -0.78
SSBP1-214ENST00000498107 TMEM223A0PJW6 202 aa10.19□□□□□ -0.78
SSBP1-214ENST00000498107 CHTF8P0CG12 524 aa10.19□□□□□ -0.78
SSBP1-214ENST00000498107 HAMPP81172 84 aa10.19□□□□□ -0.78
SSBP1-214ENST00000498107 PET117Q6UWS5 81 aa10.19□□□□□ -0.78
SSBP1-214ENST00000498107 NDUFC2-KCTD14E9PQ53 114 aa10.18□□□□□ -0.78
SSBP1-214ENST00000498107 PANO1I0J062 215 aa10.18□□□□□ -0.78
SSBP1-214ENST00000498107 IGKCP01834 107 aa10.18□□□□□ -0.78
SSBP1-214ENST00000498107 Q8N1X5 172 aa10.18□□□□□ -0.78
SSBP1-214ENST00000498107 A0A087WYN8 130 aa10.17□□□□□ -0.78
SSBP1-214ENST00000498107 S100A2P29034 98 aa10.17□□□□□ -0.78
SSBP1-214ENST00000498107 HERVK_113P61574 105 aa10.17□□□□□ -0.78
SSBP1-214ENST00000498107 PLAC8Q9NZF1 115 aa10.17□□□□□ -0.78
SSBP1-214ENST00000498107 FAM229AH3BQW9 127 aa10.16□□□□□ -0.78
SSBP1-214ENST00000498107 STPG4Q8N801 248 aa10.16□□□□□ -0.78
SSBP1-214ENST00000498107 HSPG2P98160 4391 aa10.16□□□□□ -0.78
SSBP1-214ENST00000498107 SMR3BP02814 79 aaPredicted RBP10.15□□□□□ -0.78
SSBP1-214ENST00000498107 Q6ZRP5 223 aa10.15□□□□□ -0.78
SSBP1-214ENST00000498107 PMCHL2Q9BQD1 86 aa10.15□□□□□ -0.78
SSBP1-214ENST00000498107 C20orf202A1L168 122 aa10.14□□□□□ -0.79
SSBP1-214ENST00000498107 C3orf79P0CE67 100 aa10.14□□□□□ -0.79
SSBP1-214ENST00000498107 AKR1D1P51857 326 aa10.14□□□□□ -0.79
SSBP1-214ENST00000498107 KRTDAPP60985 99 aa10.14□□□□□ -0.79
SSBP1-214ENST00000498107 GAGE2EQ4V326 116 aa10.14□□□□□ -0.79
SSBP1-214ENST00000498107 C9orf116Q5BN46 136 aaPredicted RBP10.14□□□□□ -0.79
SSBP1-214ENST00000498107 LINC01545Q5VT33 79 aa10.14□□□□□ -0.79
SSBP1-214ENST00000498107 GAGE2DQ9UEU5 116 aa10.14□□□□□ -0.79
SSBP1-214ENST00000498107 EPM2AB3EWF7 344 aa10.13□□□□□ -0.79
SSBP1-214ENST00000498107 HIST3H2BBQ8N257 126 aa10.13□□□□□ -0.79
SSBP1-214ENST00000498107 LINC00528Q8N1L1 170 aa10.12□□□□□ -0.79
SSBP1-214ENST00000498107 PLEKHB2Q96CS7 222 aa10.12□□□□□ -0.79
SSBP1-214ENST00000498107 LEPROTO15243 131 aa10.11□□□□□ -0.79
SSBP1-214ENST00000498107 COX17Q14061 63 aa10.11□□□□□ -0.79
SSBP1-214ENST00000498107 PLA2G1BP04054 148 aaKnown RBP10.1□□□□□ -0.79
SSBP1-214ENST00000498107 Q5VSD8 79 aa10.1□□□□□ -0.79
SSBP1-214ENST00000498107 C7orf33Q8WU49 177 aa10.1□□□□□ -0.79
SSBP1-214ENST00000498107 ZNF625Q96I27 306 aaPredicted RBP10.1□□□□□ -0.79
SSBP1-214ENST00000498107 HIST1H2BLQ99880 126 aa10.1□□□□□ -0.79
SSBP1-214ENST00000498107 ERG28Q9UKR5 140 aa10.1□□□□□ -0.79
SSBP1-214ENST00000498107 MYMXA0A1B0GTQ4 84 aa10.09□□□□□ -0.79
SSBP1-214ENST00000498107 SNRPEP62304 92 aaKnown RBP10.09□□□□□ -0.79
SSBP1-214ENST00000498107 HERV-K104P63124 156 aa10.09□□□□□ -0.79
SSBP1-214ENST00000498107 ABCA13Q86UQ4 5058 aa10.08□□□□□ -0.8
SSBP1-214ENST00000498107 LINC00587B1AMM8 73 aa10.08□□□□□ -0.8
SSBP1-214ENST00000498107 NDUFA12Q9UI09 145 aa10.08□□□□□ -0.8
SSBP1-214ENST00000498107 C5orf52A6NGY3 159 aa10.07□□□□□ -0.8
SSBP1-214ENST00000498107 J3QQQ9 107 aa10.07□□□□□ -0.8
SSBP1-214ENST00000498107 LGALS3P17931 250 aaKnown RBP10.07□□□□□ -0.8
SSBP1-214ENST00000498107 PFN2P35080 140 aa10.07□□□□□ -0.8
SSBP1-214ENST00000498107 NMUP48645 174 aa10.07□□□□□ -0.8
SSBP1-214ENST00000498107 A0A1W2PNN7 141 aa10.06□□□□□ -0.8
SSBP1-214ENST00000498107 E9PLD3 99 aa10.06□□□□□ -0.8
SSBP1-214ENST00000498107 C9orf129Q5T035 196 aaKnown RBP10.06□□□□□ -0.8
SSBP1-214ENST00000498107 KRTAP4-5Q9BYR2 181 aa10.05□□□□□ -0.8
SSBP1-214ENST00000498107 XAGE1AQ9HD64 81 aa10.05□□□□□ -0.8
SSBP1-214ENST00000498107 RPL37AP61513 92 aaKnown RBP10.04□□□□□ -0.8
SSBP1-214ENST00000498107 MEIG1Q5JSS6 88 aa10.04□□□□□ -0.8
SSBP1-214ENST00000498107 FAM19A5Q7Z5A7 132 aaPredicted RBP10.04□□□□□ -0.8
SSBP1-214ENST00000498107 LINC00158P58513 81 aa10.03□□□□□ -0.8
SSBP1-214ENST00000498107 FAM168BA1KXE4 195 aa10.02□□□□□ -0.81
SSBP1-214ENST00000498107 TSPEAR-AS2P59090 65 aa10.02□□□□□ -0.81
SSBP1-214ENST00000498107 FAT1Q14517 4588 aa10.01□□□□□ -0.81
SSBP1-214ENST00000498107 PLA2G2DQ9UNK4 145 aa10.01□□□□□ -0.81
SSBP1-214ENST00000498107 M0QXV9 152 aa10□□□□□ -0.81
SSBP1-214ENST00000498107 SND1-IT1Q9HBX3 110 aa10□□□□□ -0.81
SSBP1-214ENST00000498107 SMIM13P0DJ93 91 aa9.99□□□□□ -0.81
SSBP1-214ENST00000498107 LBHQ53QV2 105 aaPredicted RBP9.99□□□□□ -0.81
SSBP1-214ENST00000498107 PHF5AQ7RTV0 110 aaKnown RBP9.99□□□□□ -0.81
SSBP1-214ENST00000498107 A0A0U1RRA0 63 aa9.98□□□□□ -0.81
SSBP1-214ENST00000498107 RPL24P83731 157 aaKnown RBP9.98□□□□□ -0.81
SSBP1-214ENST00000498107 SERTAD4-AS1Q5TG53 156 aa9.98□□□□□ -0.81
SSBP1-214ENST00000498107 TP73-AS1Q9UF72 201 aa9.98□□□□□ -0.81
SSBP1-214ENST00000498107 VPS13BQ7Z7G8 4022 aa9.97□□□□□ -0.81
SSBP1-214ENST00000498107 HSBP1L1C9JCN9 74 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms