RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10□□□□□ -0.81
VIM-208ENST00000497849 ZNF25P17030 456 aaPredicted RBP10□□□□□ -0.81
VIM-208ENST00000497849 SMAGPQ0VAQ4 97 aa10□□□□□ -0.81
VIM-208ENST00000497849 PRR4Q16378 134 aa10□□□□□ -0.81
VIM-208ENST00000497849 ZC2HC1BQ5TFG8 222 aa10□□□□□ -0.81
VIM-208ENST00000497849 TMEM141Q96I45 108 aa10□□□□□ -0.81
VIM-208ENST00000497849 TIMM17AQ99595 171 aa10□□□□□ -0.81
VIM-208ENST00000497849 TIMM21Q9BVV7 248 aa10□□□□□ -0.81
VIM-208ENST00000497849 IGIPA6NJ69 53 aa9.99□□□□□ -0.81
VIM-208ENST00000497849 SYS1-DBNDD2H3BUS1 97 aa9.99□□□□□ -0.81
VIM-208ENST00000497849 Q6ZN92 141 aa9.99□□□□□ -0.81
VIM-208ENST00000497849 CHCHD10Q8WYQ3 142 aaPredicted RBP9.99□□□□□ -0.81
VIM-208ENST00000497849 PYGO1Q9Y3Y4 419 aa9.99□□□□□ -0.81
VIM-208ENST00000497849 PET117Q6UWS5 81 aa9.98□□□□□ -0.81
VIM-208ENST00000497849 LINC00526Q96FQ7 95 aa9.98□□□□□ -0.81
VIM-208ENST00000497849 SPANXA1Q9NS26 97 aa9.98□□□□□ -0.81
VIM-208ENST00000497849 IGLV4-3A0A075B6K6 122 aa9.97□□□□□ -0.81
VIM-208ENST00000497849 A0A1W2PNN7 141 aa9.97□□□□□ -0.81
VIM-208ENST00000497849 C20orf202A1L168 122 aa9.97□□□□□ -0.81
VIM-208ENST00000497849 H0Y8G0 127 aa9.97□□□□□ -0.81
VIM-208ENST00000497849 SCGB1D1O95968 90 aa9.97□□□□□ -0.81
VIM-208ENST00000497849 JOSD1Q15040 202 aaPredicted RBP9.97□□□□□ -0.81
VIM-208ENST00000497849 PKIGQ9Y2B9 76 aa9.97□□□□□ -0.81
VIM-208ENST00000497849 CSDC2Q9Y534 153 aaKnown RBP9.97□□□□□ -0.81
VIM-208ENST00000497849 NPSP0C0P6 89 aa9.96□□□□□ -0.82
VIM-208ENST00000497849 FOXI1Q12951 378 aa9.96□□□□□ -0.82
VIM-208ENST00000497849 PAPPA-AS1Q5QFB9 102 aa9.96□□□□□ -0.82
VIM-208ENST00000497849 CARD19Q96LW7 228 aa9.96□□□□□ -0.82
VIM-208ENST00000497849 TRAV13-1A0A0B4J241 112 aa9.95□□□□□ -0.82
VIM-208ENST00000497849 LINC00959A0A1B0GUT2 108 aa9.95□□□□□ -0.82
VIM-208ENST00000497849 PTTG1IPP53801 180 aa9.95□□□□□ -0.82
VIM-208ENST00000497849 MRPS36P82909 103 aaKnown RBP9.95□□□□□ -0.82
VIM-208ENST00000497849 PYY3Q5JQD4 70 aa9.95□□□□□ -0.82
VIM-208ENST00000497849 SMIM6P0DI80 62 aa9.94□□□□□ -0.82
VIM-208ENST00000497849 C1orf137Q5JT78 98 aa9.94□□□□□ -0.82
VIM-208ENST00000497849 TRAV12-1A0A0B4J245 112 aa9.93□□□□□ -0.82
VIM-208ENST00000497849 PMVKQ15126 192 aa9.93□□□□□ -0.82
VIM-208ENST00000497849 LINC01545Q5VT33 79 aa9.93□□□□□ -0.82
VIM-208ENST00000497849 VCX2Q9H322 139 aa9.93□□□□□ -0.82
VIM-208ENST00000497849 CCL25O15444 150 aa9.92□□□□□ -0.82
VIM-208ENST00000497849 XCL1P47992 114 aa9.92□□□□□ -0.82
VIM-208ENST00000497849 GAGE2BQ13066 116 aa9.92□□□□□ -0.82
VIM-208ENST00000497849 SS18Q15532 418 aa9.92□□□□□ -0.82
VIM-208ENST00000497849 DIRC1Q969H9 104 aa9.92□□□□□ -0.82
VIM-208ENST00000497849 SYCNQ0VAF6 134 aa9.91□□□□□ -0.82
VIM-208ENST00000497849 TEX43Q6ZNM6 134 aa9.91□□□□□ -0.82
VIM-208ENST00000497849 AMELXQ99217 191 aa9.91□□□□□ -0.82
VIM-208ENST00000497849 CST9LQ9H4G1 147 aa9.91□□□□□ -0.82
VIM-208ENST00000497849 CHTOPQ9Y3Y2 248 aaKnown RBP9.91□□□□□ -0.82
VIM-208ENST00000497849 IGLV1-50A0A075B6I6 118 aa9.9□□□□□ -0.82
VIM-208ENST00000497849 IGHV1-58A0A0C4DH39 117 aa9.9□□□□□ -0.82
VIM-208ENST00000497849 IGLV7-43P04211 117 aa9.9□□□□□ -0.82
VIM-208ENST00000497849 KRTAP1-4P0C5Y4 121 aa9.9□□□□□ -0.82
VIM-208ENST00000497849 PMCHL2Q9BQD1 86 aa9.9□□□□□ -0.82
VIM-208ENST00000497849 H0Y9J4 135 aa9.89□□□□□ -0.83
VIM-208ENST00000497849 PHF5AQ7RTV0 110 aaKnown RBP9.89□□□□□ -0.83
VIM-208ENST00000497849 C2orf88Q9BSF0 95 aa9.89□□□□□ -0.83
VIM-208ENST00000497849 MRPL35Q9NZE8 188 aaKnown RBP9.89□□□□□ -0.83
VIM-208ENST00000497849 MUC17Q685J3 4493 aa9.89□□□□□ -0.83
VIM-208ENST00000497849 LOC107984640A0A0U1RRK4 108 aa9.88□□□□□ -0.83
VIM-208ENST00000497849 F8VRH5 84 aa9.88□□□□□ -0.83
VIM-208ENST00000497849 DPM2O94777 84 aa9.88□□□□□ -0.83
VIM-208ENST00000497849 C9orf116Q5BN46 136 aaPredicted RBP9.88□□□□□ -0.83
VIM-208ENST00000497849 C5orf38Q86SI9 138 aa9.88□□□□□ -0.83
VIM-208ENST00000497849 FSIP2Q5CZC0 6907 aa9.87□□□□□ -0.83
VIM-208ENST00000497849 PLNP26678 52 aa9.87□□□□□ -0.83
VIM-208ENST00000497849 UBE2D1P51668 147 aa9.87□□□□□ -0.83
VIM-208ENST00000497849 LINC00518Q8N0U6 118 aa9.87□□□□□ -0.83
VIM-208ENST00000497849 ATOH7Q8N100 152 aa9.87□□□□□ -0.83
VIM-208ENST00000497849 C12orf57Q99622 126 aa9.87□□□□□ -0.83
VIM-208ENST00000497849 IGKCP01834 107 aa9.86□□□□□ -0.83
VIM-208ENST00000497849 LINC00242Q5T6M2 205 aa9.86□□□□□ -0.83
VIM-208ENST00000497849 CD164L2Q6UWJ8 174 aa9.86□□□□□ -0.83
VIM-208ENST00000497849 ZNF561-AS1K7EIQ3 104 aa9.85□□□□□ -0.83
VIM-208ENST00000497849 S100A12P80511 92 aa9.85□□□□□ -0.83
VIM-208ENST00000497849 KRTAP11-1Q8IUC1 163 aa9.85□□□□□ -0.83
VIM-208ENST00000497849 IGLV4-69A0A075B6H9 119 aa9.84□□□□□ -0.83
VIM-208ENST00000497849 HSBP1L1C9JCN9 74 aa9.83□□□□□ -0.84
VIM-208ENST00000497849 IGLC3P0DOY3 106 aa9.83□□□□□ -0.84
VIM-208ENST00000497849 VAMP8Q9BV40 100 aa9.83□□□□□ -0.84
VIM-208ENST00000497849 IGHV3OR16-9A0A0B4J2B5 98 aa9.82□□□□□ -0.84
VIM-208ENST00000497849 C11orf86A6NJI1 115 aa9.82□□□□□ -0.84
VIM-208ENST00000497849 COX7A2LO14548 114 aa9.82□□□□□ -0.84
VIM-208ENST00000497849 SEC11AP67812 179 aa9.82□□□□□ -0.84
VIM-208ENST00000497849 TINCRA0A1B0GVN0 87 aa9.81□□□□□ -0.84
VIM-208ENST00000497849 APOMO95445 188 aa9.81□□□□□ -0.84
VIM-208ENST00000497849 GEMIN7Q9H840 131 aaKnown RBP9.81□□□□□ -0.84
VIM-208ENST00000497849 CRCT1Q9UGL9 99 aa9.81□□□□□ -0.84
VIM-208ENST00000497849 A0A087WZ39 114 aa9.8□□□□□ -0.84
VIM-208ENST00000497849 MALP21145 153 aa9.8□□□□□ -0.84
VIM-208ENST00000497849 RPL13AP40429 203 aaKnown RBP9.8□□□□□ -0.84
VIM-208ENST00000497849 FAM19A3Q7Z5A8 133 aa9.8□□□□□ -0.84
VIM-208ENST00000497849 PAM16Q9Y3D7 125 aa9.8□□□□□ -0.84
VIM-208ENST00000497849 HERVK_113P63121 156 aa9.79□□□□□ -0.84
VIM-208ENST00000497849 TMEM170BQ5T4T1 132 aa9.79□□□□□ -0.84
VIM-208ENST00000497849 LCE2DQ5TA82 110 aaPredicted RBP9.79□□□□□ -0.84
VIM-208ENST00000497849 CDKN2A-AS1Q9UH64 79 aa9.79□□□□□ -0.84
VIM-208ENST00000497849 TSPAN13O95857 204 aa9.78□□□□□ -0.84
VIM-208ENST00000497849 ZNF22P17026 224 aaPredicted RBP9.78□□□□□ -0.84
VIM-208ENST00000497849 RPL18AQ02543 176 aaKnown RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms