RNA–Protein interactions for RNA: ENST00000497758.1

MRPL55-234, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-234ENST00000497758 C2orf82Q6UX34 121 aa7.44□□□□□ -1.22
MRPL55-234ENST00000497758 C7orf33Q8WU49 177 aa7.44□□□□□ -1.22
MRPL55-234ENST00000497758 TRBV30A0A0K0K1B3 111 aa7.43□□□□□ -1.22
MRPL55-234ENST00000497758 Q8IZM0 81 aa7.43□□□□□ -1.22
MRPL55-234ENST00000497758 C6orf48Q9UBA6 75 aa7.43□□□□□ -1.22
MRPL55-234ENST00000497758 IGLV5-45A0A087WSX0 123 aa7.42□□□□□ -1.22
MRPL55-234ENST00000497758 SCO1O75880 301 aa7.42□□□□□ -1.22
MRPL55-234ENST00000497758 FLG2Q5D862 2391 aaPredicted RBP7.42□□□□□ -1.22
MRPL55-234ENST00000497758 SMIM1B2RUZ4 78 aa7.41□□□□□ -1.22
MRPL55-234ENST00000497758 SPINK8P0C7L1 97 aa7.41□□□□□ -1.22
MRPL55-234ENST00000497758 IGLC3P0DOY3 106 aa7.41□□□□□ -1.22
MRPL55-234ENST00000497758 CXCL5P42830 114 aa7.41□□□□□ -1.22
MRPL55-234ENST00000497758 SERF1AO75920 110 aa7.4□□□□□ -1.22
MRPL55-234ENST00000497758 TLX1NBP0CAT3 122 aa7.4□□□□□ -1.22
MRPL55-234ENST00000497758 GAGE2EQ4V326 116 aa7.4□□□□□ -1.22
MRPL55-234ENST00000497758 FAM19A2Q8N3H0 131 aa7.4□□□□□ -1.22
MRPL55-234ENST00000497758 COX7B2Q8TF08 81 aa7.4□□□□□ -1.22
MRPL55-234ENST00000497758 IFI27L1Q96BM0 104 aa7.4□□□□□ -1.22
MRPL55-234ENST00000497758 GAGE2DQ9UEU5 116 aa7.4□□□□□ -1.22
MRPL55-234ENST00000497758 MYCBP2O75592 4640 aa7.4□□□□□ -1.23
MRPL55-234ENST00000497758 NDUFC2-KCTD14E9PQ53 114 aa7.39□□□□□ -1.23
MRPL55-234ENST00000497758 F8VRH5 84 aa7.39□□□□□ -1.23
MRPL55-234ENST00000497758 Q6ZRP5 223 aa7.39□□□□□ -1.23
MRPL55-234ENST00000497758 CHTOPQ9Y3Y2 248 aaKnown RBP7.39□□□□□ -1.23
MRPL55-234ENST00000497758 ZNF22P17026 224 aaPredicted RBP7.38□□□□□ -1.23
MRPL55-234ENST00000497758 C9orf116Q5BN46 136 aaPredicted RBP7.38□□□□□ -1.23
MRPL55-234ENST00000497758 TMEM170BQ5T4T1 132 aa7.38□□□□□ -1.23
MRPL55-234ENST00000497758 DMBT1Q9UGM3 2413 aaPredicted RBP7.37□□□□□ -1.23
MRPL55-234ENST00000497758 TRAV12-1A0A0B4J245 112 aa7.37□□□□□ -1.23
MRPL55-234ENST00000497758 A0A1W2PNN7 141 aa7.37□□□□□ -1.23
MRPL55-234ENST00000497758 C11orf86A6NJI1 115 aa7.37□□□□□ -1.23
MRPL55-234ENST00000497758 LEPROTL1O95214 131 aa7.37□□□□□ -1.23
MRPL55-234ENST00000497758 KRTAP10-4P60372 401 aaPredicted RBP7.37□□□□□ -1.23
MRPL55-234ENST00000497758 H0Y8G0 127 aa7.36□□□□□ -1.23
MRPL55-234ENST00000497758 HSPB8Q9UJY1 196 aa7.36□□□□□ -1.23
MRPL55-234ENST00000497758 IGLV5-39A0A0G2JS06 123 aa7.35□□□□□ -1.23
MRPL55-234ENST00000497758 LINC00310P59036 64 aa7.35□□□□□ -1.23
MRPL55-234ENST00000497758 FAM19A5Q7Z5A7 132 aaPredicted RBP7.35□□□□□ -1.23
MRPL55-234ENST00000497758 FAM168BA1KXE4 195 aa7.34□□□□□ -1.23
MRPL55-234ENST00000497758 FABP4P15090 132 aa7.34□□□□□ -1.23
MRPL55-234ENST00000497758 PRR3P79522 188 aaKnown RBP7.34□□□□□ -1.23
MRPL55-234ENST00000497758 NUPR1O60356 82 aa7.33□□□□□ -1.24
MRPL55-234ENST00000497758 HIST1H2BKO60814 126 aa7.33□□□□□ -1.24
MRPL55-234ENST00000497758 HIST1H2BJP06899 126 aa7.33□□□□□ -1.24
MRPL55-234ENST00000497758 HIST1H2BOP23527 126 aa7.33□□□□□ -1.24
MRPL55-234ENST00000497758 HIST1H2BBP33778 126 aa7.33□□□□□ -1.24
MRPL55-234ENST00000497758 HIST1H2BDP58876 126 aa7.33□□□□□ -1.24
MRPL55-234ENST00000497758 HIST1H2BCP62807 126 aa7.33□□□□□ -1.24
MRPL55-234ENST00000497758 HIST2H2BEQ16778 126 aa7.33□□□□□ -1.24
MRPL55-234ENST00000497758 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.33□□□□□ -1.24
MRPL55-234ENST00000497758 HIST1H2BHQ93079 126 aa7.33□□□□□ -1.24
MRPL55-234ENST00000497758 HIST1H2BNQ99877 126 aa7.33□□□□□ -1.24
MRPL55-234ENST00000497758 HIST1H2BMQ99879 126 aa7.33□□□□□ -1.24
MRPL55-234ENST00000497758 C9orf129Q5T035 196 aaKnown RBP7.32□□□□□ -1.24
MRPL55-234ENST00000497758 SFTA2Q6UW10 78 aa7.32□□□□□ -1.24
MRPL55-234ENST00000497758 PHF5AQ7RTV0 110 aaKnown RBP7.32□□□□□ -1.24
MRPL55-234ENST00000497758 XAGE1AQ9HD64 81 aa7.32□□□□□ -1.24
MRPL55-234ENST00000497758 J3QL48 77 aa7.31□□□□□ -1.24
MRPL55-234ENST00000497758 M0QXV9 152 aa7.31□□□□□ -1.24
MRPL55-234ENST00000497758 S100A1P23297 94 aa7.31□□□□□ -1.24
MRPL55-234ENST00000497758 HNRNPA3P51991 378 aaKnown RBP7.31□□□□□ -1.24
MRPL55-234ENST00000497758 ODF1Q14990 250 aa7.31□□□□□ -1.24
MRPL55-234ENST00000497758 TMEM223A0PJW6 202 aa7.3□□□□□ -1.24
MRPL55-234ENST00000497758 PLNP26678 52 aa7.3□□□□□ -1.24
MRPL55-234ENST00000497758 MAP1LC3CQ9BXW4 147 aa7.3□□□□□ -1.24
MRPL55-234ENST00000497758 PKHD1L1Q86WI1 4243 aa7.29□□□□□ -1.24
MRPL55-234ENST00000497758 PFN2P35080 140 aa7.29□□□□□ -1.24
MRPL55-234ENST00000497758 UBE2BP63146 152 aa7.29□□□□□ -1.24
MRPL55-234ENST00000497758 ATP6V1G1O75348 118 aa7.28□□□□□ -1.24
MRPL55-234ENST00000497758 DPM2O94777 84 aa7.28□□□□□ -1.24
MRPL55-234ENST00000497758 ZNF625Q96I27 306 aaPredicted RBP7.28□□□□□ -1.24
MRPL55-234ENST00000497758 PSORS1C2Q9UIG4 136 aa7.28□□□□□ -1.24
MRPL55-234ENST00000497758 ERG28Q9UKR5 140 aa7.28□□□□□ -1.24
MRPL55-234ENST00000497758 HERC1Q15751 4861 aa7.28□□□□□ -1.24
MRPL55-234ENST00000497758 KRTAP29-1A8MX34 341 aaPredicted RBP7.27□□□□□ -1.25
MRPL55-234ENST00000497758 OXTP01178 125 aa7.27□□□□□ -1.25
MRPL55-234ENST00000497758 HERVK_113P61574 105 aa7.27□□□□□ -1.25
MRPL55-234ENST00000497758 COX17Q14061 63 aa7.27□□□□□ -1.25
MRPL55-234ENST00000497758 LBHQ53QV2 105 aaPredicted RBP7.27□□□□□ -1.25
MRPL55-234ENST00000497758 C1orf137Q5JT78 98 aa7.27□□□□□ -1.25
MRPL55-234ENST00000497758 SERTAD4-AS1Q5TG53 156 aa7.27□□□□□ -1.25
MRPL55-234ENST00000497758 KRTAP7-1Q8IUC3 87 aa7.27□□□□□ -1.25
MRPL55-234ENST00000497758 LRP1Q07954 4544 aaKnown RBP7.26□□□□□ -1.25
MRPL55-234ENST00000497758 IGKCP01834 107 aa7.26□□□□□ -1.25
MRPL55-234ENST00000497758 PMCHL2Q9BQD1 86 aa7.26□□□□□ -1.25
MRPL55-234ENST00000497758 C22orf24Q9Y442 160 aa7.26□□□□□ -1.25
MRPL55-234ENST00000497758 LINC00158P58513 81 aa7.25□□□□□ -1.25
MRPL55-234ENST00000497758 SPINK6Q6UWN8 80 aa7.25□□□□□ -1.25
MRPL55-234ENST00000497758 NKAPP1Q8N9T2 125 aa7.25□□□□□ -1.25
MRPL55-234ENST00000497758 FAT3Q8TDW7 4589 aa7.25□□□□□ -1.25
MRPL55-234ENST00000497758 SYS1-DBNDD2H3BUS1 97 aa7.24□□□□□ -1.25
MRPL55-234ENST00000497758 MRPL55Q7Z7F7 128 aaKnown RBP7.24□□□□□ -1.25
MRPL55-234ENST00000497758 PLEKHB2Q96CS7 222 aa7.24□□□□□ -1.25
MRPL55-234ENST00000497758 SND1-IT1Q9HBX3 110 aa7.24□□□□□ -1.25
MRPL55-234ENST00000497758 TP73-AS1Q9UF72 201 aa7.24□□□□□ -1.25
MRPL55-234ENST00000497758 NDUFA12Q9UI09 145 aa7.24□□□□□ -1.25
MRPL55-234ENST00000497758 PLA2G2DQ9UNK4 145 aa7.24□□□□□ -1.25
MRPL55-234ENST00000497758 MYMXA0A1B0GTQ4 84 aa7.23□□□□□ -1.25
MRPL55-234ENST00000497758 LEPROTO15243 131 aa7.23□□□□□ -1.25
MRPL55-234ENST00000497758 HERV-K104P63124 156 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms