RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 SYCNQ0VAF6 134 aa13.01□□□□□ -0.33
CTSD-206ENST00000497544 C6orf226Q5I0X4 101 aa13.01□□□□□ -0.33
CTSD-206ENST00000497544 CAMK2N2Q96S95 79 aa13.01□□□□□ -0.33
CTSD-206ENST00000497544 TMA7Q9Y2S6 64 aaKnown RBP13.01□□□□□ -0.33
CTSD-206ENST00000497544 IGKCP01834 107 aa13□□□□□ -0.33
CTSD-206ENST00000497544 GCSHP23434 173 aa13□□□□□ -0.33
CTSD-206ENST00000497544 Q8IZM0 81 aa13□□□□□ -0.33
CTSD-206ENST00000497544 F8WDY8 70 aa12.99□□□□□ -0.33
CTSD-206ENST00000497544 KIAA0087Q14695 138 aa12.99□□□□□ -0.33
CTSD-206ENST00000497544 LINC01545Q5VT33 79 aa12.99□□□□□ -0.33
CTSD-206ENST00000497544 C9orf163Q8N9P6 203 aa12.99□□□□□ -0.33
CTSD-206ENST00000497544 NDUFA1O15239 70 aa12.98□□□□□ -0.33
CTSD-206ENST00000497544 COX7B2Q8TF08 81 aa12.98□□□□□ -0.33
CTSD-206ENST00000497544 CARD19Q96LW7 228 aa12.98□□□□□ -0.33
CTSD-206ENST00000497544 TMEM223A0PJW6 202 aa12.97□□□□□ -0.33
CTSD-206ENST00000497544 C20orf202A1L168 122 aa12.97□□□□□ -0.33
CTSD-206ENST00000497544 CKS1BP61024 79 aa12.97□□□□□ -0.33
CTSD-206ENST00000497544 LINC01620Q4KN68 170 aa12.96□□□□□ -0.33
CTSD-206ENST00000497544 Q6ZRU5 148 aa12.96□□□□□ -0.33
CTSD-206ENST00000497544 IGLV5-39A0A0G2JS06 123 aa12.95□□□□□ -0.34
CTSD-206ENST00000497544 UNQ6190/PRO20217Q6UXQ8 127 aa12.95□□□□□ -0.34
CTSD-206ENST00000497544 SRRM2Q9UQ35 2752 aaKnown RBP12.94□□□□□ -0.34
CTSD-206ENST00000497544 INAFM2P0DMQ5 153 aa12.94□□□□□ -0.34
CTSD-206ENST00000497544 C2orf82Q6UX34 121 aa12.94□□□□□ -0.34
CTSD-206ENST00000497544 CXCL5P42830 114 aa12.93□□□□□ -0.34
CTSD-206ENST00000497544 HERVK_113P61574 105 aa12.93□□□□□ -0.34
CTSD-206ENST00000497544 KRTAP10-1P60331 282 aa12.92□□□□□ -0.34
CTSD-206ENST00000497544 AKR1D1P51857 326 aa12.91□□□□□ -0.34
CTSD-206ENST00000497544 RNF151Q2KHN1 245 aa12.91□□□□□ -0.34
CTSD-206ENST00000497544 C10orf25Q5T742 122 aa12.91□□□□□ -0.34
CTSD-206ENST00000497544 SDIM1Q6ZPB5 146 aa12.9□□□□□ -0.34
CTSD-206ENST00000497544 PKIGQ9Y2B9 76 aa12.9□□□□□ -0.34
CTSD-206ENST00000497544 TRBV30A0A0K0K1B3 111 aa12.89□□□□□ -0.35
CTSD-206ENST00000497544 C6orf48Q9UBA6 75 aa12.89□□□□□ -0.35
CTSD-206ENST00000497544 EPM2AB3EWF7 344 aa12.88□□□□□ -0.35
CTSD-206ENST00000497544 PLEKHB2Q96CS7 222 aa12.88□□□□□ -0.35
CTSD-206ENST00000497544 FAT1Q14517 4588 aa12.87□□□□□ -0.35
CTSD-206ENST00000497544 LOC107984640A0A0U1RRK4 108 aa12.87□□□□□ -0.35
CTSD-206ENST00000497544 LEPROTO15243 131 aa12.87□□□□□ -0.35
CTSD-206ENST00000497544 FLG2Q5D862 2391 aaPredicted RBP12.87□□□□□ -0.35
CTSD-206ENST00000497544 STPG4Q8N801 248 aa12.86□□□□□ -0.35
CTSD-206ENST00000497544 VPS13BQ7Z7G8 4022 aa12.86□□□□□ -0.35
CTSD-206ENST00000497544 SCGB1D1O95968 90 aa12.85□□□□□ -0.35
CTSD-206ENST00000497544 SFTA2Q6UW10 78 aa12.85□□□□□ -0.35
CTSD-206ENST00000497544 ATOH7Q8N100 152 aa12.85□□□□□ -0.35
CTSD-206ENST00000497544 E9PLD3 99 aa12.84□□□□□ -0.35
CTSD-206ENST00000497544 C9orf116Q5BN46 136 aaPredicted RBP12.84□□□□□ -0.35
CTSD-206ENST00000497544 DPH3Q96FX2 82 aa12.84□□□□□ -0.35
CTSD-206ENST00000497544 HMCN2Q8NDA2 5059 aa12.83□□□□□ -0.36
CTSD-206ENST00000497544 GAGE2BQ13066 116 aa12.83□□□□□ -0.36
CTSD-206ENST00000497544 J3QQQ9 107 aa12.82□□□□□ -0.36
CTSD-206ENST00000497544 LGALS3P17931 250 aaKnown RBP12.82□□□□□ -0.36
CTSD-206ENST00000497544 RPL18AQ02543 176 aaKnown RBP12.82□□□□□ -0.36
CTSD-206ENST00000497544 FAM30AQ9NZY2 134 aa12.82□□□□□ -0.36
CTSD-206ENST00000497544 NDUFA12Q9UI09 145 aa12.82□□□□□ -0.36
CTSD-206ENST00000497544 IGKV2-24A0A0C4DH68 120 aa12.81□□□□□ -0.36
CTSD-206ENST00000497544 MYMXA0A1B0GTQ4 84 aa12.81□□□□□ -0.36
CTSD-206ENST00000497544 TLX1NBP0CAT3 122 aa12.81□□□□□ -0.36
CTSD-206ENST00000497544 ZNF625Q96I27 306 aaPredicted RBP12.81□□□□□ -0.36
CTSD-206ENST00000497544 A0A096LNI7 61 aa12.8□□□□□ -0.36
CTSD-206ENST00000497544 NDUFC2-KCTD14E9PQ53 114 aa12.8□□□□□ -0.36
CTSD-206ENST00000497544 CHTF8P0CG12 524 aa12.79□□□□□ -0.36
CTSD-206ENST00000497544 TSPEAR-AS2P59090 65 aa12.79□□□□□ -0.36
CTSD-206ENST00000497544 HERV-K104P63124 156 aa12.79□□□□□ -0.36
CTSD-206ENST00000497544 LINC00474Q9P2X8 69 aa12.79□□□□□ -0.36
CTSD-206ENST00000497544 HSBP1L1C9JCN9 74 aa12.78□□□□□ -0.36
CTSD-206ENST00000497544 NMUP48645 174 aa12.78□□□□□ -0.36
CTSD-206ENST00000497544 PTTG1IPP53801 180 aa12.78□□□□□ -0.36
CTSD-206ENST00000497544 MAJINQ3KP22 176 aa12.78□□□□□ -0.36
CTSD-206ENST00000497544 GAGE2EQ4V326 116 aa12.78□□□□□ -0.36
CTSD-206ENST00000497544 Q6ZRP5 223 aa12.78□□□□□ -0.36
CTSD-206ENST00000497544 Q6ZSA8 131 aa12.78□□□□□ -0.36
CTSD-206ENST00000497544 GAGE2DQ9UEU5 116 aa12.78□□□□□ -0.36
CTSD-206ENST00000497544 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.78□□□□□ -0.36
CTSD-206ENST00000497544 PFN2P35080 140 aa12.77□□□□□ -0.37
CTSD-206ENST00000497544 ERG28Q9UKR5 140 aa12.77□□□□□ -0.37
CTSD-206ENST00000497544 IGKV2D-26A0A0A0MRZ7 120 aa12.75□□□□□ -0.37
CTSD-206ENST00000497544 PANO1I0J062 215 aa12.75□□□□□ -0.37
CTSD-206ENST00000497544 CIRBPQ14011 172 aaKnown RBP12.75□□□□□ -0.37
CTSD-206ENST00000497544 JOSD1Q15040 202 aaPredicted RBP12.75□□□□□ -0.37
CTSD-206ENST00000497544 ANKRD39Q53RE8 183 aa12.75□□□□□ -0.37
CTSD-206ENST00000497544 MEIG1Q5JSS6 88 aa12.75□□□□□ -0.37
CTSD-206ENST00000497544 LINC00587B1AMM8 73 aa12.74□□□□□ -0.37
CTSD-206ENST00000497544 LINC00158P58513 81 aa12.74□□□□□ -0.37
CTSD-206ENST00000497544 COX17Q14061 63 aa12.74□□□□□ -0.37
CTSD-206ENST00000497544 SPACA4Q8TDM5 124 aa12.74□□□□□ -0.37
CTSD-206ENST00000497544 XGP55808 180 aa12.73□□□□□ -0.37
CTSD-206ENST00000497544 A0A087WYN8 130 aa12.72□□□□□ -0.37
CTSD-206ENST00000497544 HAMPP81172 84 aa12.72□□□□□ -0.37
CTSD-206ENST00000497544 A0A0U1RRA0 63 aa12.71□□□□□ -0.37
CTSD-206ENST00000497544 SCXQ7RTU7 201 aa12.71□□□□□ -0.37
CTSD-206ENST00000497544 CIRBP-AS1Q8TBR5 109 aa12.71□□□□□ -0.37
CTSD-206ENST00000497544 ZNF815PA8K554 130 aa12.7□□□□□ -0.38
CTSD-206ENST00000497544 SMIM13P0DJ93 91 aa12.7□□□□□ -0.38
CTSD-206ENST00000497544 Q5VSD8 79 aa12.7□□□□□ -0.38
CTSD-206ENST00000497544 XAGE1AQ9HD64 81 aa12.7□□□□□ -0.38
CTSD-206ENST00000497544 J3QL48 77 aa12.69□□□□□ -0.38
CTSD-206ENST00000497544 TTTY13Q9BZ97 58 aa12.68□□□□□ -0.38
CTSD-206ENST00000497544 A0A0J9YXY3 114 aa12.67□□□□□ -0.38
CTSD-206ENST00000497544 C9orf129Q5T035 196 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms