RNA–Protein interactions for RNA: ENST00000496202.5

PRPF3-207, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 1 (best)

Gene PRPF3, Length 1,082 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-207ENST00000496202 TMEM170BQ5T4T1 132 aa6.26□□□□□ -1.41
PRPF3-207ENST00000496202 MRPL35Q9NZE8 188 aaKnown RBP6.26□□□□□ -1.41
PRPF3-207ENST00000496202 C11orf86A6NJI1 115 aa6.25□□□□□ -1.41
PRPF3-207ENST00000496202 SMIM1B2RUZ4 78 aa6.25□□□□□ -1.41
PRPF3-207ENST00000496202 F8VRH5 84 aa6.25□□□□□ -1.41
PRPF3-207ENST00000496202 SLPIP03973 132 aa6.25□□□□□ -1.41
PRPF3-207ENST00000496202 ZNF22P17026 224 aaPredicted RBP6.25□□□□□ -1.41
PRPF3-207ENST00000496202 CKS1BP61024 79 aa6.25□□□□□ -1.41
PRPF3-207ENST00000496202 Q6ZRU5 148 aa6.25□□□□□ -1.41
PRPF3-207ENST00000496202 Q8IZM0 81 aa6.25□□□□□ -1.41
PRPF3-207ENST00000496202 CDK2AP2O75956 126 aa6.24□□□□□ -1.41
PRPF3-207ENST00000496202 LORP23490 312 aaPredicted RBP6.24□□□□□ -1.41
PRPF3-207ENST00000496202 PLNP26678 52 aa6.24□□□□□ -1.41
PRPF3-207ENST00000496202 COX7B2Q8TF08 81 aa6.24□□□□□ -1.41
PRPF3-207ENST00000496202 LOC107984640A0A0U1RRK4 108 aa6.23□□□□□ -1.41
PRPF3-207ENST00000496202 DPM2O94777 84 aa6.23□□□□□ -1.41
PRPF3-207ENST00000496202 S100A2P29034 98 aa6.23□□□□□ -1.41
PRPF3-207ENST00000496202 CXCL5P42830 114 aa6.23□□□□□ -1.41
PRPF3-207ENST00000496202 KIAA0087Q14695 138 aa6.23□□□□□ -1.41
PRPF3-207ENST00000496202 RNF151Q2KHN1 245 aa6.23□□□□□ -1.41
PRPF3-207ENST00000496202 UNQ6190/PRO20217Q6UXQ8 127 aa6.23□□□□□ -1.41
PRPF3-207ENST00000496202 SDIM1Q6ZPB5 146 aa6.23□□□□□ -1.41
PRPF3-207ENST00000496202 TRBV30A0A0K0K1B3 111 aa6.22□□□□□ -1.41
PRPF3-207ENST00000496202 KRTDAPP60985 99 aa6.22□□□□□ -1.41
PRPF3-207ENST00000496202 C2orf82Q6UX34 121 aa6.22□□□□□ -1.41
PRPF3-207ENST00000496202 DPH3Q96FX2 82 aa6.22□□□□□ -1.41
PRPF3-207ENST00000496202 PMCHL2Q9BQD1 86 aa6.22□□□□□ -1.41
PRPF3-207ENST00000496202 BIRC6Q9NR09 4857 aa6.22□□□□□ -1.41
PRPF3-207ENST00000496202 IGKV2-24A0A0C4DH68 120 aa6.21□□□□□ -1.42
PRPF3-207ENST00000496202 IGLV5-39A0A0G2JS06 123 aa6.21□□□□□ -1.42
PRPF3-207ENST00000496202 SYS1-DBNDD2H3BUS1 97 aa6.21□□□□□ -1.42
PRPF3-207ENST00000496202 IGKCP01834 107 aa6.21□□□□□ -1.42
PRPF3-207ENST00000496202 HAMPP81172 84 aa6.21□□□□□ -1.42
PRPF3-207ENST00000496202 RPL18AQ02543 176 aaKnown RBP6.21□□□□□ -1.42
PRPF3-207ENST00000496202 C10orf25Q5T742 122 aa6.21□□□□□ -1.42
PRPF3-207ENST00000496202 Q6ZSA8 131 aa6.21□□□□□ -1.42
PRPF3-207ENST00000496202 LINC00474Q9P2X8 69 aa6.21□□□□□ -1.42
PRPF3-207ENST00000496202 C6orf48Q9UBA6 75 aa6.21□□□□□ -1.42
PRPF3-207ENST00000496202 DYNC1H1Q14204 4646 aaKnown RBP6.21□□□□□ -1.42
PRPF3-207ENST00000496202 DNAH5Q8TE73 4624 aa6.21□□□□□ -1.42
PRPF3-207ENST00000496202 TMEM223A0PJW6 202 aa6.2□□□□□ -1.42
PRPF3-207ENST00000496202 C20orf202A1L168 122 aa6.2□□□□□ -1.42
PRPF3-207ENST00000496202 CHTF8P0CG12 524 aa6.2□□□□□ -1.42
PRPF3-207ENST00000496202 HERVK_113P61574 105 aa6.2□□□□□ -1.42
PRPF3-207ENST00000496202 GAGE2BQ13066 116 aa6.2□□□□□ -1.42
PRPF3-207ENST00000496202 PET117Q6UWS5 81 aa6.2□□□□□ -1.42
PRPF3-207ENST00000496202 A0A096LNI7 61 aa6.19□□□□□ -1.42
PRPF3-207ENST00000496202 C3orf79P0CE67 100 aa6.19□□□□□ -1.42
PRPF3-207ENST00000496202 PCP4P48539 62 aa6.19□□□□□ -1.42
PRPF3-207ENST00000496202 MAJINQ3KP22 176 aa6.19□□□□□ -1.42
PRPF3-207ENST00000496202 SFTA2Q6UW10 78 aa6.19□□□□□ -1.42
PRPF3-207ENST00000496202 SCXQ7RTU7 201 aa6.19□□□□□ -1.42
PRPF3-207ENST00000496202 HIST3H2BBQ8N257 126 aa6.19□□□□□ -1.42
PRPF3-207ENST00000496202 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.19□□□□□ -1.42
PRPF3-207ENST00000496202 LRP1BQ9NZR2 4599 aa6.19□□□□□ -1.42
PRPF3-207ENST00000496202 XGP55808 180 aa6.18□□□□□ -1.42
PRPF3-207ENST00000496202 SNRPEP62304 92 aaKnown RBP6.18□□□□□ -1.42
PRPF3-207ENST00000496202 C9orf116Q5BN46 136 aaPredicted RBP6.18□□□□□ -1.42
PRPF3-207ENST00000496202 LINC01545Q5VT33 79 aa6.18□□□□□ -1.42
PRPF3-207ENST00000496202 SPACA4Q8TDM5 124 aa6.18□□□□□ -1.42
PRPF3-207ENST00000496202 NDUFC2-KCTD14E9PQ53 114 aa6.17□□□□□ -1.42
PRPF3-207ENST00000496202 TLX1NBP0CAT3 122 aa6.17□□□□□ -1.42
PRPF3-207ENST00000496202 CIRBPQ14011 172 aaKnown RBP6.17□□□□□ -1.42
PRPF3-207ENST00000496202 GAGE2EQ4V326 116 aa6.17□□□□□ -1.42
PRPF3-207ENST00000496202 CIRBP-AS1Q8TBR5 109 aa6.17□□□□□ -1.42
PRPF3-207ENST00000496202 PLEKHB2Q96CS7 222 aa6.17□□□□□ -1.42
PRPF3-207ENST00000496202 HIST1H2BLQ99880 126 aa6.17□□□□□ -1.42
PRPF3-207ENST00000496202 GAGE2DQ9UEU5 116 aa6.17□□□□□ -1.42
PRPF3-207ENST00000496202 A0A087WYN8 130 aa6.16□□□□□ -1.42
PRPF3-207ENST00000496202 PANO1I0J062 215 aa6.16□□□□□ -1.42
PRPF3-207ENST00000496202 LEPROTO15243 131 aa6.16□□□□□ -1.42
PRPF3-207ENST00000496202 AKR1D1P51857 326 aa6.16□□□□□ -1.42
PRPF3-207ENST00000496202 STPG4Q8N801 248 aa6.16□□□□□ -1.42
PRPF3-207ENST00000496202 A4D1N5 150 aa6.15□□□□□ -1.42
PRPF3-207ENST00000496202 SMR3BP02814 79 aaPredicted RBP6.15□□□□□ -1.42
PRPF3-207ENST00000496202 Q6ZRP5 223 aa6.15□□□□□ -1.42
PRPF3-207ENST00000496202 MYMXA0A1B0GTQ4 84 aa6.14□□□□□ -1.43
PRPF3-207ENST00000496202 PLA2G1BP04054 148 aaKnown RBP6.14□□□□□ -1.43
PRPF3-207ENST00000496202 LGALS3P17931 250 aaKnown RBP6.14□□□□□ -1.43
PRPF3-207ENST00000496202 ZNF625Q96I27 306 aaPredicted RBP6.14□□□□□ -1.43
PRPF3-207ENST00000496202 PLAC8Q9NZF1 115 aa6.14□□□□□ -1.43
PRPF3-207ENST00000496202 NDUFA12Q9UI09 145 aa6.14□□□□□ -1.43
PRPF3-207ENST00000496202 ERG28Q9UKR5 140 aa6.14□□□□□ -1.43
PRPF3-207ENST00000496202 C5orf52A6NGY3 159 aa6.13□□□□□ -1.43
PRPF3-207ENST00000496202 J3QQQ9 107 aa6.13□□□□□ -1.43
PRPF3-207ENST00000496202 PFN2P35080 140 aa6.13□□□□□ -1.43
PRPF3-207ENST00000496202 HERV-K104P63124 156 aa6.13□□□□□ -1.43
PRPF3-207ENST00000496202 MEIG1Q5JSS6 88 aa6.13□□□□□ -1.43
PRPF3-207ENST00000496202 E9PLD3 99 aa6.12□□□□□ -1.43
PRPF3-207ENST00000496202 NMUP48645 174 aa6.12□□□□□ -1.43
PRPF3-207ENST00000496202 TSPEAR-AS2P59090 65 aa6.12□□□□□ -1.43
PRPF3-207ENST00000496202 COX17Q14061 63 aa6.12□□□□□ -1.43
PRPF3-207ENST00000496202 FAM19A5Q7Z5A7 132 aaPredicted RBP6.12□□□□□ -1.43
PRPF3-207ENST00000496202 ATOH7Q8N100 152 aa6.12□□□□□ -1.43
PRPF3-207ENST00000496202 Q8N1X5 172 aa6.12□□□□□ -1.43
PRPF3-207ENST00000496202 C7orf33Q8WU49 177 aa6.12□□□□□ -1.43
PRPF3-207ENST00000496202 XAGE1AQ9HD64 81 aa6.12□□□□□ -1.43
PRPF3-207ENST00000496202 KIAA1109Q2LD37 5005 aa6.12□□□□□ -1.43
PRPF3-207ENST00000496202 APOBP04114 4563 aaKnown RBP6.11□□□□□ -1.43
PRPF3-207ENST00000496202 LINC00587B1AMM8 73 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms