RNA–Protein interactions for RNA: ENST00000495308.5

FDPS-219, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-219ENST00000495308 HIST1H2BOP23527 126 aa8.63□□□□□ -1.03
FDPS-219ENST00000495308 HIST1H2BBP33778 126 aa8.63□□□□□ -1.03
FDPS-219ENST00000495308 HIST1H2BDP58876 126 aa8.63□□□□□ -1.03
FDPS-219ENST00000495308 HIST1H2BCP62807 126 aa8.63□□□□□ -1.03
FDPS-219ENST00000495308 HIST2H2BEQ16778 126 aa8.63□□□□□ -1.03
FDPS-219ENST00000495308 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.63□□□□□ -1.03
FDPS-219ENST00000495308 HIST1H2BHQ93079 126 aa8.63□□□□□ -1.03
FDPS-219ENST00000495308 HIST1H2BNQ99877 126 aa8.63□□□□□ -1.03
FDPS-219ENST00000495308 HIST1H2BMQ99879 126 aa8.63□□□□□ -1.03
FDPS-219ENST00000495308 C6orf48Q9UBA6 75 aa8.63□□□□□ -1.03
FDPS-219ENST00000495308 MYCBP2O75592 4640 aa8.63□□□□□ -1.03
FDPS-219ENST00000495308 F8WDY8 70 aa8.62□□□□□ -1.03
FDPS-219ENST00000495308 FAM229AH3BQW9 127 aa8.62□□□□□ -1.03
FDPS-219ENST00000495308 RPL18AQ02543 176 aaKnown RBP8.62□□□□□ -1.03
FDPS-219ENST00000495308 GAGE2BQ13066 116 aa8.62□□□□□ -1.03
FDPS-219ENST00000495308 RNF151Q2KHN1 245 aa8.62□□□□□ -1.03
FDPS-219ENST00000495308 Q8IZM0 81 aa8.62□□□□□ -1.03
FDPS-219ENST00000495308 PKIGQ9Y2B9 76 aa8.62□□□□□ -1.03
FDPS-219ENST00000495308 CHTOPQ9Y3Y2 248 aaKnown RBP8.62□□□□□ -1.03
FDPS-219ENST00000495308 ZNF22P17026 224 aaPredicted RBP8.61□□□□□ -1.03
FDPS-219ENST00000495308 PTTG1IPP53801 180 aa8.61□□□□□ -1.03
FDPS-219ENST00000495308 C6orf226Q5I0X4 101 aa8.61□□□□□ -1.03
FDPS-219ENST00000495308 C11orf86A6NJI1 115 aa8.6□□□□□ -1.03
FDPS-219ENST00000495308 H0Y8G0 127 aa8.6□□□□□ -1.03
FDPS-219ENST00000495308 LEPROTL1O95214 131 aa8.6□□□□□ -1.03
FDPS-219ENST00000495308 FABP4P15090 132 aa8.6□□□□□ -1.03
FDPS-219ENST00000495308 CKS1BP61024 79 aa8.6□□□□□ -1.03
FDPS-219ENST00000495308 C9orf116Q5BN46 136 aaPredicted RBP8.6□□□□□ -1.03
FDPS-219ENST00000495308 STPG4Q8N801 248 aa8.6□□□□□ -1.03
FDPS-219ENST00000495308 H3BRM9 83 aa8.59□□□□□ -1.03
FDPS-219ENST00000495308 COX7B2Q8TF08 81 aa8.59□□□□□ -1.03
FDPS-219ENST00000495308 PLAC8Q9NZF1 115 aa8.59□□□□□ -1.03
FDPS-219ENST00000495308 FAT3Q8TDW7 4589 aa8.58□□□□□ -1.04
FDPS-219ENST00000495308 TRAV12-1A0A0B4J245 112 aa8.58□□□□□ -1.04
FDPS-219ENST00000495308 TRBV30A0A0K0K1B3 111 aa8.58□□□□□ -1.04
FDPS-219ENST00000495308 Q6ZRP5 223 aa8.58□□□□□ -1.04
FDPS-219ENST00000495308 LINC00474Q9P2X8 69 aa8.58□□□□□ -1.04
FDPS-219ENST00000495308 TMEM170BQ5T4T1 132 aa8.57□□□□□ -1.04
FDPS-219ENST00000495308 IGLV5-39A0A0G2JS06 123 aa8.56□□□□□ -1.04
FDPS-219ENST00000495308 F8VRH5 84 aa8.56□□□□□ -1.04
FDPS-219ENST00000495308 TLX1NBP0CAT3 122 aa8.56□□□□□ -1.04
FDPS-219ENST00000495308 ODF1Q14990 250 aa8.56□□□□□ -1.04
FDPS-219ENST00000495308 GAGE2EQ4V326 116 aa8.56□□□□□ -1.04
FDPS-219ENST00000495308 GAGE2DQ9UEU5 116 aa8.56□□□□□ -1.04
FDPS-219ENST00000495308 HSPB8Q9UJY1 196 aa8.56□□□□□ -1.04
FDPS-219ENST00000495308 NDUFC2-KCTD14E9PQ53 114 aa8.55□□□□□ -1.04
FDPS-219ENST00000495308 PLA2G1BP04054 148 aaKnown RBP8.55□□□□□ -1.04
FDPS-219ENST00000495308 CXCL5P42830 114 aa8.55□□□□□ -1.04
FDPS-219ENST00000495308 LRP1Q07954 4544 aaKnown RBP8.54□□□□□ -1.04
FDPS-219ENST00000495308 A0A1W2PNN7 141 aa8.54□□□□□ -1.04
FDPS-219ENST00000495308 KRTAP10-4P60372 401 aaPredicted RBP8.54□□□□□ -1.04
FDPS-219ENST00000495308 RPL37AP61513 92 aaKnown RBP8.54□□□□□ -1.04
FDPS-219ENST00000495308 FAM168BA1KXE4 195 aa8.53□□□□□ -1.04
FDPS-219ENST00000495308 TMEM223A0PJW6 202 aa8.52□□□□□ -1.05
FDPS-219ENST00000495308 INAFM2P0DMQ5 153 aa8.52□□□□□ -1.05
FDPS-219ENST00000495308 PMCHL2Q9BQD1 86 aa8.52□□□□□ -1.05
FDPS-219ENST00000495308 C9orf129Q5T035 196 aaKnown RBP8.51□□□□□ -1.05
FDPS-219ENST00000495308 C7orf33Q8WU49 177 aa8.51□□□□□ -1.05
FDPS-219ENST00000495308 MAP1LC3CQ9BXW4 147 aa8.51□□□□□ -1.05
FDPS-219ENST00000495308 COA6Q5JTJ3 125 aaKnown RBP8.5□□□□□ -1.05
FDPS-219ENST00000495308 FAM19A5Q7Z5A7 132 aaPredicted RBP8.5□□□□□ -1.05
FDPS-219ENST00000495308 PLNP26678 52 aa8.49□□□□□ -1.05
FDPS-219ENST00000495308 PHF5AQ7RTV0 110 aaKnown RBP8.49□□□□□ -1.05
FDPS-219ENST00000495308 XAGE1AQ9HD64 81 aa8.49□□□□□ -1.05
FDPS-219ENST00000495308 FLG2Q5D862 2391 aaPredicted RBP8.48□□□□□ -1.05
FDPS-219ENST00000495308 DPM2O94777 84 aa8.48□□□□□ -1.05
FDPS-219ENST00000495308 KRTAP7-1Q8IUC3 87 aa8.48□□□□□ -1.05
FDPS-219ENST00000495308 ZNF625Q96I27 306 aaPredicted RBP8.48□□□□□ -1.05
FDPS-219ENST00000495308 IGKCP01834 107 aa8.47□□□□□ -1.05
FDPS-219ENST00000495308 PFN2P35080 140 aa8.47□□□□□ -1.05
FDPS-219ENST00000495308 HNRNPA3P51991 378 aaKnown RBP8.47□□□□□ -1.05
FDPS-219ENST00000495308 SYS1-DBNDD2H3BUS1 97 aa8.46□□□□□ -1.06
FDPS-219ENST00000495308 HERC1Q15751 4861 aa8.46□□□□□ -1.06
FDPS-219ENST00000495308 C3orf79P0CE67 100 aa8.45□□□□□ -1.06
FDPS-219ENST00000495308 TSPEAR-AS2P59090 65 aa8.45□□□□□ -1.06
FDPS-219ENST00000495308 PRR3P79522 188 aaKnown RBP8.45□□□□□ -1.06
FDPS-219ENST00000495308 SERTAD4-AS1Q5TG53 156 aa8.45□□□□□ -1.06
FDPS-219ENST00000495308 ERG28Q9UKR5 140 aa8.45□□□□□ -1.06
FDPS-219ENST00000495308 M0QXV9 152 aa8.44□□□□□ -1.06
FDPS-219ENST00000495308 KRTDAPP60985 99 aa8.43□□□□□ -1.06
FDPS-219ENST00000495308 LINC01545Q5VT33 79 aa8.43□□□□□ -1.06
FDPS-219ENST00000495308 SFTA2Q6UW10 78 aa8.43□□□□□ -1.06
FDPS-219ENST00000495308 PET117Q6UWS5 81 aa8.43□□□□□ -1.06
FDPS-219ENST00000495308 LEPROTO15243 131 aa8.42□□□□□ -1.06
FDPS-219ENST00000495308 HERVK_113P61574 105 aa8.42□□□□□ -1.06
FDPS-219ENST00000495308 KRTAP11-1Q8IUC1 163 aa8.42□□□□□ -1.06
FDPS-219ENST00000495308 NDUFA12Q9UI09 145 aa8.42□□□□□ -1.06
FDPS-219ENST00000495308 A0A0U1RRA0 63 aa8.41□□□□□ -1.06
FDPS-219ENST00000495308 COX17Q14061 63 aa8.41□□□□□ -1.06
FDPS-219ENST00000495308 PLEKHB2Q96CS7 222 aa8.41□□□□□ -1.06
FDPS-219ENST00000495308 PSORS1C2Q9UIG4 136 aa8.41□□□□□ -1.06
FDPS-219ENST00000495308 C22orf24Q9Y442 160 aa8.41□□□□□ -1.06
FDPS-219ENST00000495308 J3QQQ9 107 aa8.4□□□□□ -1.06
FDPS-219ENST00000495308 SMIM13P0DJ93 91 aa8.4□□□□□ -1.06
FDPS-219ENST00000495308 LINC00158P58513 81 aa8.4□□□□□ -1.06
FDPS-219ENST00000495308 UBE2BP63146 152 aa8.4□□□□□ -1.06
FDPS-219ENST00000495308 HIST3H2BBQ8N257 126 aa8.4□□□□□ -1.06
FDPS-219ENST00000495308 SND1-IT1Q9HBX3 110 aa8.4□□□□□ -1.06
FDPS-219ENST00000495308 MYMXA0A1B0GTQ4 84 aa8.39□□□□□ -1.07
FDPS-219ENST00000495308 MEIG1Q5JSS6 88 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 121.8 ms