RNA–Protein interactions for RNA: ENST00000495298.1

GTF3C2-213, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 2

Gene GTF3C2, Length 1,064 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-213ENST00000495298 IGLV1-50A0A075B6I6 118 aa5.6□□□□□ -1.51
GTF3C2-213ENST00000495298 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.6□□□□□ -1.51
GTF3C2-213ENST00000495298 COX7A2LO14548 114 aa5.6□□□□□ -1.51
GTF3C2-213ENST00000495298 JOSD1Q15040 202 aaPredicted RBP5.6□□□□□ -1.51
GTF3C2-213ENST00000495298 C10orf25Q5T742 122 aa5.6□□□□□ -1.51
GTF3C2-213ENST00000495298 FAM19A5Q7Z5A7 132 aaPredicted RBP5.6□□□□□ -1.51
GTF3C2-213ENST00000495298 TRAV13-1A0A0B4J241 112 aa5.59□□□□□ -1.51
GTF3C2-213ENST00000495298 VPREB1P12018 145 aa5.59□□□□□ -1.51
GTF3C2-213ENST00000495298 POLR2KP53803 58 aaKnown RBP5.59□□□□□ -1.51
GTF3C2-213ENST00000495298 SPAG11BQ08648 103 aa5.59□□□□□ -1.51
GTF3C2-213ENST00000495298 FA2HQ7L5A8 372 aa5.59□□□□□ -1.51
GTF3C2-213ENST00000495298 C2orf48Q96LS8 159 aa5.59□□□□□ -1.51
GTF3C2-213ENST00000495298 YPEL4Q96NS1 127 aa5.59□□□□□ -1.51
GTF3C2-213ENST00000495298 SIGMAR1Q99720 223 aa5.59□□□□□ -1.51
GTF3C2-213ENST00000495298 TRAV1-1A0A0B4J248 108 aa5.58□□□□□ -1.52
GTF3C2-213ENST00000495298 C7orf77A4D0Y5 90 aa5.58□□□□□ -1.52
GTF3C2-213ENST00000495298 UBE2D1P51668 147 aa5.58□□□□□ -1.52
GTF3C2-213ENST00000495298 COA6Q5JTJ3 125 aaKnown RBP5.58□□□□□ -1.52
GTF3C2-213ENST00000495298 Q6ZUT4 128 aa5.58□□□□□ -1.52
GTF3C2-213ENST00000495298 ST20Q9HBF5 79 aa5.58□□□□□ -1.52
GTF3C2-213ENST00000495298 SPANXCQ9NY87 97 aa5.58□□□□□ -1.52
GTF3C2-213ENST00000495298 UBE2D4Q9Y2X8 147 aa5.58□□□□□ -1.52
GTF3C2-213ENST00000495298 TRBV27A0A0K0K1C4 114 aa5.57□□□□□ -1.52
GTF3C2-213ENST00000495298 IFITM10A6NMD0 228 aa5.57□□□□□ -1.52
GTF3C2-213ENST00000495298 SMKR1H3BMG3 65 aa5.57□□□□□ -1.52
GTF3C2-213ENST00000495298 HIST3H2BBQ8N257 126 aa5.57□□□□□ -1.52
GTF3C2-213ENST00000495298 OR13C6PQ8NH95 151 aa5.57□□□□□ -1.52
GTF3C2-213ENST00000495298 FAM104AQ969W3 186 aa5.57□□□□□ -1.52
GTF3C2-213ENST00000495298 PRO1933Q9H354 126 aa5.57□□□□□ -1.52
GTF3C2-213ENST00000495298 PPDPFQ9H3Y8 114 aa5.57□□□□□ -1.52
GTF3C2-213ENST00000495298 C6orf48Q9UBA6 75 aa5.57□□□□□ -1.52
GTF3C2-213ENST00000495298 HSPB8Q9UJY1 196 aa5.57□□□□□ -1.52
GTF3C2-213ENST00000495298 ERG28Q9UKR5 140 aa5.57□□□□□ -1.52
GTF3C2-213ENST00000495298 TINCRA0A1B0GVN0 87 aa5.56□□□□□ -1.52
GTF3C2-213ENST00000495298 GAGE2EQ4V326 116 aa5.56□□□□□ -1.52
GTF3C2-213ENST00000495298 UNQ6190/PRO20217Q6UXQ8 127 aa5.56□□□□□ -1.52
GTF3C2-213ENST00000495298 MRPL35Q9NZE8 188 aaKnown RBP5.56□□□□□ -1.52
GTF3C2-213ENST00000495298 GAGE2DQ9UEU5 116 aa5.56□□□□□ -1.52
GTF3C2-213ENST00000495298 A0A087X002 238 aa5.55□□□□□ -1.52
GTF3C2-213ENST00000495298 AMN1Q8IY45 258 aa5.55□□□□□ -1.52
GTF3C2-213ENST00000495298 OR10D4PQ8NGN7 298 aa5.55□□□□□ -1.52
GTF3C2-213ENST00000495298 TMEM126AQ9H061 195 aa5.55□□□□□ -1.52
GTF3C2-213ENST00000495298 RPS10P5Q9NQ39 176 aa5.55□□□□□ -1.52
GTF3C2-213ENST00000495298 FSIP2Q5CZC0 6907 aa5.54□□□□□ -1.52
GTF3C2-213ENST00000495298 TLX1NBP0CAT3 122 aa5.54□□□□□ -1.52
GTF3C2-213ENST00000495298 RPL13AP40429 203 aaKnown RBP5.54□□□□□ -1.52
GTF3C2-213ENST00000495298 C9orf129Q5T035 196 aaKnown RBP5.54□□□□□ -1.52
GTF3C2-213ENST00000495298 NRACQ8N912 160 aa5.54□□□□□ -1.52
GTF3C2-213ENST00000495298 PRO0628Q9UI54 55 aa5.54□□□□□ -1.52
GTF3C2-213ENST00000495298 IGHV3OR16-9A0A0B4J2B5 98 aa5.53□□□□□ -1.52
GTF3C2-213ENST00000495298 NDUFA1O15239 70 aa5.53□□□□□ -1.52
GTF3C2-213ENST00000495298 RPL39P62891 51 aaKnown RBP5.53□□□□□ -1.52
GTF3C2-213ENST00000495298 UBE2BP63146 152 aa5.53□□□□□ -1.52
GTF3C2-213ENST00000495298 IMMP2LQ96T52 175 aa5.53□□□□□ -1.52
GTF3C2-213ENST00000495298 RETNLBQ9BQ08 111 aa5.53□□□□□ -1.52
GTF3C2-213ENST00000495298 TMEM191AQ9H0A3 160 aa5.53□□□□□ -1.52
GTF3C2-213ENST00000495298 HIST1H2BKO60814 126 aa5.52□□□□□ -1.53
GTF3C2-213ENST00000495298 HIST1H2BJP06899 126 aa5.52□□□□□ -1.53
GTF3C2-213ENST00000495298 HIST1H2BOP23527 126 aa5.52□□□□□ -1.53
GTF3C2-213ENST00000495298 FCER1GP30273 86 aa5.52□□□□□ -1.53
GTF3C2-213ENST00000495298 HIST1H2BBP33778 126 aa5.52□□□□□ -1.53
GTF3C2-213ENST00000495298 NDUFA6P56556 154 aa5.52□□□□□ -1.53
GTF3C2-213ENST00000495298 HIST1H2BDP58876 126 aa5.52□□□□□ -1.53
GTF3C2-213ENST00000495298 HIST1H2BCP62807 126 aa5.52□□□□□ -1.53
GTF3C2-213ENST00000495298 KIAA0087Q14695 138 aa5.52□□□□□ -1.53
GTF3C2-213ENST00000495298 TAL2Q16559 108 aa5.52□□□□□ -1.53
GTF3C2-213ENST00000495298 HIST2H2BEQ16778 126 aa5.52□□□□□ -1.53
GTF3C2-213ENST00000495298 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.52□□□□□ -1.53
GTF3C2-213ENST00000495298 TSKUQ8WUA8 353 aa5.52□□□□□ -1.53
GTF3C2-213ENST00000495298 HIST1H2BHQ93079 126 aa5.52□□□□□ -1.53
GTF3C2-213ENST00000495298 HIST1H2BNQ99877 126 aa5.52□□□□□ -1.53
GTF3C2-213ENST00000495298 HIST1H2BMQ99879 126 aa5.52□□□□□ -1.53
GTF3C2-213ENST00000495298 MAP1LC3AQ9H492 121 aa5.52□□□□□ -1.53
GTF3C2-213ENST00000495298 NAT8Q9UHE5 227 aa5.52□□□□□ -1.53
GTF3C2-213ENST00000495298 TRBV24-1A0A075B6N3 115 aa5.51□□□□□ -1.53
GTF3C2-213ENST00000495298 HIGD1CA8MV81 97 aa5.51□□□□□ -1.53
GTF3C2-213ENST00000495298 VCYO14598 125 aa5.51□□□□□ -1.53
GTF3C2-213ENST00000495298 SUMO2P61956 95 aaKnown RBP5.51□□□□□ -1.53
GTF3C2-213ENST00000495298 SRSF3P84103 164 aaKnown RBP5.51□□□□□ -1.53
GTF3C2-213ENST00000495298 C2orf82Q6UX34 121 aa5.51□□□□□ -1.53
GTF3C2-213ENST00000495298 FAM231DQ6ZW35 169 aa5.51□□□□□ -1.53
GTF3C2-213ENST00000495298 HIST1H2BLQ99880 126 aa5.51□□□□□ -1.53
GTF3C2-213ENST00000495298 A0A1B0GUT8 65 aa5.5□□□□□ -1.53
GTF3C2-213ENST00000495298 A0A1B0GX51 115 aa5.5□□□□□ -1.53
GTF3C2-213ENST00000495298 A8MWL6 223 aa5.5□□□□□ -1.53
GTF3C2-213ENST00000495298 ZNF861PO60384 105 aa5.5□□□□□ -1.53
GTF3C2-213ENST00000495298 PNRC1Q12796 327 aaPredicted RBP5.5□□□□□ -1.53
GTF3C2-213ENST00000495298 TIMM21Q9BVV7 248 aa5.5□□□□□ -1.53
GTF3C2-213ENST00000495298 ANAPC11Q9NYG5 84 aa5.5□□□□□ -1.53
GTF3C2-213ENST00000495298 RPS28P62857 69 aaKnown RBP5.49□□□□□ -1.53
GTF3C2-213ENST00000495298 NAT8BQ9UHF3 227 aa5.49□□□□□ -1.53
GTF3C2-213ENST00000495298 PMVKQ15126 192 aa5.48□□□□□ -1.53
GTF3C2-213ENST00000495298 MRPL51Q4U2R6 128 aaKnown RBP5.48□□□□□ -1.53
GTF3C2-213ENST00000495298 KRTAP13-2Q52LG2 175 aa5.48□□□□□ -1.53
GTF3C2-213ENST00000495298 FAM19A1Q7Z5A9 133 aa5.48□□□□□ -1.53
GTF3C2-213ENST00000495298 TMEM18Q96B42 140 aa5.48□□□□□ -1.53
GTF3C2-213ENST00000495298 MIEN1Q9BRT3 115 aa5.48□□□□□ -1.53
GTF3C2-213ENST00000495298 LAMTOR2Q9Y2Q5 125 aa5.48□□□□□ -1.53
GTF3C2-213ENST00000495298 C9JQL5 133 aa5.47□□□□□ -1.53
GTF3C2-213ENST00000495298 NDUFC2-KCTD14E9PQ53 114 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms