RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 ZC2HC1BQ5TFG8 222 aa8.31□□□□□ -1.08
VARS-228ENST00000495010 LINC00167Q96N53 147 aa8.31□□□□□ -1.08
VARS-228ENST00000495010 IGLV7-46A0A075B6I9 117 aa8.3□□□□□ -1.08
VARS-228ENST00000495010 A0A1B0GXF2 115 aa8.3□□□□□ -1.08
VARS-228ENST00000495010 TPRXLQ17RH7 258 aa8.3□□□□□ -1.08
VARS-228ENST00000495010 C2orf66Q6UXQ4 117 aa8.3□□□□□ -1.08
VARS-228ENST00000495010 LINC00173Q6ZV60 143 aa8.3□□□□□ -1.08
VARS-228ENST00000495010 MAP1LC3AQ9H492 121 aa8.3□□□□□ -1.08
VARS-228ENST00000495010 IGKV2D-26A0A0A0MRZ7 120 aa8.29□□□□□ -1.08
VARS-228ENST00000495010 GAGE10A6NGK3 116 aa8.29□□□□□ -1.08
VARS-228ENST00000495010 CXCL5P42830 114 aa8.29□□□□□ -1.08
VARS-228ENST00000495010 HERVK_113P63121 156 aa8.29□□□□□ -1.08
VARS-228ENST00000495010 SEC11AP67812 179 aa8.29□□□□□ -1.08
VARS-228ENST00000495010 FAM229BQ4G0N7 80 aa8.29□□□□□ -1.08
VARS-228ENST00000495010 KRTAP13-2Q52LG2 175 aa8.29□□□□□ -1.08
VARS-228ENST00000495010 AKAP14Q86UN6 197 aa8.29□□□□□ -1.08
VARS-228ENST00000495010 AMELXQ99217 191 aa8.29□□□□□ -1.08
VARS-228ENST00000495010 FAT4Q6V0I7 4981 aa8.29□□□□□ -1.08
VARS-228ENST00000495010 GEMIN7Q9H840 131 aaKnown RBP8.28□□□□□ -1.08
VARS-228ENST00000495010 LAMTOR2Q9Y2Q5 125 aa8.28□□□□□ -1.08
VARS-228ENST00000495010 NPSP0C0P6 89 aa8.27□□□□□ -1.09
VARS-228ENST00000495010 ORMDL2Q53FV1 153 aa8.27□□□□□ -1.09
VARS-228ENST00000495010 PAPPA-AS1Q5QFB9 102 aa8.27□□□□□ -1.09
VARS-228ENST00000495010 ATP5L2Q7Z4Y8 100 aa8.27□□□□□ -1.09
VARS-228ENST00000495010 NKAPP1Q8N9T2 125 aa8.27□□□□□ -1.09
VARS-228ENST00000495010 A0A1B0GVG6 124 aa8.26□□□□□ -1.09
VARS-228ENST00000495010 PRSS47A8MTI9 375 aa8.26□□□□□ -1.09
VARS-228ENST00000495010 FAM19A3Q7Z5A8 133 aa8.26□□□□□ -1.09
VARS-228ENST00000495010 Q8N8P6 123 aa8.26□□□□□ -1.09
VARS-228ENST00000495010 CDKN2A-AS1Q9UH64 79 aa8.26□□□□□ -1.09
VARS-228ENST00000495010 PEA15Q15121 130 aa8.25□□□□□ -1.09
VARS-228ENST00000495010 C9JQL5 133 aa8.24□□□□□ -1.09
VARS-228ENST00000495010 CTAG1AP78358 180 aa8.24□□□□□ -1.09
VARS-228ENST00000495010 PNRC1Q12796 327 aaPredicted RBP8.24□□□□□ -1.09
VARS-228ENST00000495010 PPDPFQ9H3Y8 114 aa8.24□□□□□ -1.09
VARS-228ENST00000495010 IGIPA6NJ69 53 aa8.23□□□□□ -1.09
VARS-228ENST00000495010 G0S2P27469 103 aa8.23□□□□□ -1.09
VARS-228ENST00000495010 RAB5BP61020 215 aa8.23□□□□□ -1.09
VARS-228ENST00000495010 KRTAP13-1Q8IUC0 172 aa8.23□□□□□ -1.09
VARS-228ENST00000495010 COX7B2Q8TF08 81 aa8.23□□□□□ -1.09
VARS-228ENST00000495010 IGKV2-28A0A075B6P5 120 aa8.22□□□□□ -1.09
VARS-228ENST00000495010 K7EMI3 77 aa8.22□□□□□ -1.09
VARS-228ENST00000495010 IGKV2D-28P01615 120 aa8.22□□□□□ -1.09
VARS-228ENST00000495010 IGLV5-37A0A075B6J1 123 aa8.21□□□□□ -1.1
VARS-228ENST00000495010 PDZD11Q5EBL8 140 aa8.21□□□□□ -1.1
VARS-228ENST00000495010 FAM19A1Q7Z5A9 133 aa8.21□□□□□ -1.1
VARS-228ENST00000495010 PRLHP81277 87 aa8.2□□□□□ -1.1
VARS-228ENST00000495010 SRSF3P84103 164 aaKnown RBP8.2□□□□□ -1.1
VARS-228ENST00000495010 LINC00337Q8N6G1 96 aa8.2□□□□□ -1.1
VARS-228ENST00000495010 NXT2Q9NPJ8 142 aaKnown RBP8.2□□□□□ -1.1
VARS-228ENST00000495010 MUC17Q685J3 4493 aa8.19□□□□□ -1.1
VARS-228ENST00000495010 SMIM1B2RUZ4 78 aa8.19□□□□□ -1.1
VARS-228ENST00000495010 LINC01547P58512 204 aaPredicted RBP8.19□□□□□ -1.1
VARS-228ENST00000495010 TIMM17AQ99595 171 aa8.19□□□□□ -1.1
VARS-228ENST00000495010 SCO1O75880 301 aa8.17□□□□□ -1.1
VARS-228ENST00000495010 C4orf48Q5BLP8 95 aa8.17□□□□□ -1.1
VARS-228ENST00000495010 SPAG11AQ6PDA7 123 aa8.17□□□□□ -1.1
VARS-228ENST00000495010 TOMM6Q96B49 74 aa8.17□□□□□ -1.1
VARS-228ENST00000495010 SCGB3A1Q96QR1 104 aa8.17□□□□□ -1.1
VARS-228ENST00000495010 TINCRA0A1B0GVN0 87 aa8.16□□□□□ -1.1
VARS-228ENST00000495010 ATP5LO75964 103 aa8.16□□□□□ -1.1
VARS-228ENST00000495010 TMEM126AQ9H061 195 aa8.16□□□□□ -1.1
VARS-228ENST00000495010 SPINK8P0C7L1 97 aa8.15□□□□□ -1.1
VARS-228ENST00000495010 FP248Q71RG6 208 aaPredicted RBP8.15□□□□□ -1.1
VARS-228ENST00000495010 ERASQ7Z444 233 aa8.15□□□□□ -1.1
VARS-228ENST00000495010 CBLN2Q8IUK8 224 aa8.15□□□□□ -1.1
VARS-228ENST00000495010 C3orf22Q8N5N4 141 aa8.15□□□□□ -1.1
VARS-228ENST00000495010 TMEM238C9JI98 176 aa8.14□□□□□ -1.11
VARS-228ENST00000495010 PFN2P35080 140 aa8.14□□□□□ -1.11
VARS-228ENST00000495010 PLEKHB2Q96CS7 222 aa8.14□□□□□ -1.11
VARS-228ENST00000495010 GNB1LQ9BYB4 327 aa8.14□□□□□ -1.11
VARS-228ENST00000495010 IGLV5-45A0A087WSX0 123 aa8.13□□□□□ -1.11
VARS-228ENST00000495010 RPL24P83731 157 aaKnown RBP8.13□□□□□ -1.11
VARS-228ENST00000495010 HIGD2AQ9BW72 106 aa8.13□□□□□ -1.11
VARS-228ENST00000495010 H3BRM9 83 aa8.12□□□□□ -1.11
VARS-228ENST00000495010 MT-ND4LP03901 98 aa8.12□□□□□ -1.11
VARS-228ENST00000495010 ANAPC16Q96DE5 110 aa8.12□□□□□ -1.11
VARS-228ENST00000495010 MRPL18Q9H0U6 180 aaKnown RBP8.12□□□□□ -1.11
VARS-228ENST00000495010 ASB16-AS1Q495Z4 193 aa8.11□□□□□ -1.11
VARS-228ENST00000495010 LCE2DQ5TA82 110 aaPredicted RBP8.11□□□□□ -1.11
VARS-228ENST00000495010 LINC01549A6NIU2 74 aa8.1□□□□□ -1.11
VARS-228ENST00000495010 M0R378 163 aa8.1□□□□□ -1.11
VARS-228ENST00000495010 VPREB1P12018 145 aa8.1□□□□□ -1.11
VARS-228ENST00000495010 ADCYAP1P18509 176 aa8.1□□□□□ -1.11
VARS-228ENST00000495010 CST9LQ9H4G1 147 aa8.1□□□□□ -1.11
VARS-228ENST00000495010 SEC61BP60468 96 aaKnown RBP8.09□□□□□ -1.11
VARS-228ENST00000495010 RAB14P61106 215 aa8.09□□□□□ -1.11
VARS-228ENST00000495010 SND1-IT1Q9HBX3 110 aa8.09□□□□□ -1.11
VARS-228ENST00000495010 ZNF706Q9Y5V0 76 aaPredicted RBP8.09□□□□□ -1.11
VARS-228ENST00000495010 PMVKQ15126 192 aa8.08□□□□□ -1.12
VARS-228ENST00000495010 KRTAP13-3Q3SY46 172 aa8.08□□□□□ -1.12
VARS-228ENST00000495010 ERG28Q9UKR5 140 aa8.08□□□□□ -1.12
VARS-228ENST00000495010 KIAA1644Q3SXP7 199 aa8.07□□□□□ -1.12
VARS-228ENST00000495010 SPRR4Q96PI1 79 aa8.07□□□□□ -1.12
VARS-228ENST00000495010 CRCT1Q9UGL9 99 aa8.07□□□□□ -1.12
VARS-228ENST00000495010 COX17Q14061 63 aa8.06□□□□□ -1.12
VARS-228ENST00000495010 DAND5Q8N907 189 aa8.06□□□□□ -1.12
VARS-228ENST00000495010 Q8NBF4 154 aa8.06□□□□□ -1.12
VARS-228ENST00000495010 NDUFA12Q9UI09 145 aa8.06□□□□□ -1.12
VARS-228ENST00000495010 SPINK1P00995 79 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms