RNA–Protein interactions for RNA: ENST00000494426.1

CLIC3-203, Transcript of chloride intracellular channel 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC3, Length 1,017 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-203ENST00000494426 PACRGQ96M98 296 aaPredicted RBP14.79□□□□□ -0.04
CLIC3-203ENST00000494426 LINC00474Q9P2X8 69 aa14.79□□□□□ -0.04
CLIC3-203ENST00000494426 NUPR1O60356 82 aa14.77□□□□□ -0.05
CLIC3-203ENST00000494426 PRSS2P07478 247 aa14.77□□□□□ -0.05
CLIC3-203ENST00000494426 INAFM2P0DMQ5 153 aa14.77□□□□□ -0.05
CLIC3-203ENST00000494426 TLX1NBP0CAT3 122 aa14.76□□□□□ -0.05
CLIC3-203ENST00000494426 C6orf226Q5I0X4 101 aa14.76□□□□□ -0.05
CLIC3-203ENST00000494426 IFI27L1Q96BM0 104 aa14.76□□□□□ -0.05
CLIC3-203ENST00000494426 SRRM2Q9UQ35 2752 aaKnown RBP14.76□□□□□ -0.05
CLIC3-203ENST00000494426 TRBV30A0A0K0K1B3 111 aa14.75□□□□□ -0.05
CLIC3-203ENST00000494426 RPL18AQ02543 176 aaKnown RBP14.75□□□□□ -0.05
CLIC3-203ENST00000494426 SPINK8P0C7L1 97 aa14.74□□□□□ -0.05
CLIC3-203ENST00000494426 ZNF22P17026 224 aaPredicted RBP14.74□□□□□ -0.05
CLIC3-203ENST00000494426 Q6ZRP5 223 aa14.74□□□□□ -0.05
CLIC3-203ENST00000494426 C9orf116Q5BN46 136 aaPredicted RBP14.73□□□□□ -0.05
CLIC3-203ENST00000494426 A0A1W2PNN7 141 aa14.72□□□□□ -0.05
CLIC3-203ENST00000494426 C11orf86A6NJI1 115 aa14.72□□□□□ -0.05
CLIC3-203ENST00000494426 CKS1BP61024 79 aa14.72□□□□□ -0.05
CLIC3-203ENST00000494426 COX7B2Q8TF08 81 aa14.72□□□□□ -0.05
CLIC3-203ENST00000494426 TRAV12-1A0A0B4J245 112 aa14.71□□□□□ -0.05
CLIC3-203ENST00000494426 RPL37AP61513 92 aaKnown RBP14.71□□□□□ -0.05
CLIC3-203ENST00000494426 CHTOPQ9Y3Y2 248 aaKnown RBP14.71□□□□□ -0.05
CLIC3-203ENST00000494426 H3BRM9 83 aa14.7□□□□□ -0.06
CLIC3-203ENST00000494426 HIST1H2BKO60814 126 aa14.69□□□□□ -0.06
CLIC3-203ENST00000494426 HIST1H2BJP06899 126 aa14.69□□□□□ -0.06
CLIC3-203ENST00000494426 HIST1H2BOP23527 126 aa14.69□□□□□ -0.06
CLIC3-203ENST00000494426 HIST1H2BBP33778 126 aa14.69□□□□□ -0.06
CLIC3-203ENST00000494426 HIST1H2BDP58876 126 aa14.69□□□□□ -0.06
CLIC3-203ENST00000494426 HIST1H2BCP62807 126 aa14.69□□□□□ -0.06
CLIC3-203ENST00000494426 HIST2H2BEQ16778 126 aa14.69□□□□□ -0.06
CLIC3-203ENST00000494426 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.69□□□□□ -0.06
CLIC3-203ENST00000494426 HIST1H2BHQ93079 126 aa14.69□□□□□ -0.06
CLIC3-203ENST00000494426 HIST1H2BNQ99877 126 aa14.69□□□□□ -0.06
CLIC3-203ENST00000494426 HIST1H2BMQ99879 126 aa14.69□□□□□ -0.06
CLIC3-203ENST00000494426 IGLV5-39A0A0G2JS06 123 aa14.68□□□□□ -0.06
CLIC3-203ENST00000494426 F8VRH5 84 aa14.68□□□□□ -0.06
CLIC3-203ENST00000494426 NDUFC2-KCTD14E9PQ53 114 aa14.67□□□□□ -0.06
CLIC3-203ENST00000494426 LEPROTL1O95214 131 aa14.67□□□□□ -0.06
CLIC3-203ENST00000494426 CXCL5P42830 114 aa14.67□□□□□ -0.06
CLIC3-203ENST00000494426 GAGE2EQ4V326 116 aa14.67□□□□□ -0.06
CLIC3-203ENST00000494426 GAGE2DQ9UEU5 116 aa14.67□□□□□ -0.06
CLIC3-203ENST00000494426 S100A1P23297 94 aa14.64□□□□□ -0.07
CLIC3-203ENST00000494426 TMEM170BQ5T4T1 132 aa14.64□□□□□ -0.07
CLIC3-203ENST00000494426 C7orf33Q8WU49 177 aa14.64□□□□□ -0.07
CLIC3-203ENST00000494426 FAM168BA1KXE4 195 aa14.63□□□□□ -0.07
CLIC3-203ENST00000494426 FABP4P15090 132 aa14.63□□□□□ -0.07
CLIC3-203ENST00000494426 HNRNPA3P51991 378 aaKnown RBP14.63□□□□□ -0.07
CLIC3-203ENST00000494426 ATP6V1G1O75348 118 aa14.62□□□□□ -0.07
CLIC3-203ENST00000494426 ODF1Q14990 250 aa14.62□□□□□ -0.07
CLIC3-203ENST00000494426 C9orf129Q5T035 196 aaKnown RBP14.62□□□□□ -0.07
CLIC3-203ENST00000494426 KRTAP7-1Q8IUC3 87 aa14.62□□□□□ -0.07
CLIC3-203ENST00000494426 TMEM223A0PJW6 202 aa14.6□□□□□ -0.07
CLIC3-203ENST00000494426 H0Y8G0 127 aa14.6□□□□□ -0.07
CLIC3-203ENST00000494426 HSPB8Q9UJY1 196 aa14.6□□□□□ -0.07
CLIC3-203ENST00000494426 FLG2Q5D862 2391 aaPredicted RBP14.58□□□□□ -0.08
CLIC3-203ENST00000494426 PHF5AQ7RTV0 110 aaKnown RBP14.58□□□□□ -0.08
CLIC3-203ENST00000494426 PRR3P79522 188 aaKnown RBP14.56□□□□□ -0.08
CLIC3-203ENST00000494426 FAM19A5Q7Z5A7 132 aaPredicted RBP14.56□□□□□ -0.08
CLIC3-203ENST00000494426 MYCBP2O75592 4640 aa14.55□□□□□ -0.08
CLIC3-203ENST00000494426 XAGE1AQ9HD64 81 aa14.55□□□□□ -0.08
CLIC3-203ENST00000494426 PKHD1L1Q86WI1 4243 aa14.55□□□□□ -0.08
CLIC3-203ENST00000494426 COA6Q5JTJ3 125 aaKnown RBP14.53□□□□□ -0.08
CLIC3-203ENST00000494426 ZNF625Q96I27 306 aaPredicted RBP14.52□□□□□ -0.09
CLIC3-203ENST00000494426 PMCHL2Q9BQD1 86 aa14.52□□□□□ -0.09
CLIC3-203ENST00000494426 SERTAD4-AS1Q5TG53 156 aa14.51□□□□□ -0.09
CLIC3-203ENST00000494426 KRTAP11-1Q8IUC1 163 aa14.51□□□□□ -0.09
CLIC3-203ENST00000494426 MAP1LC3CQ9BXW4 147 aa14.51□□□□□ -0.09
CLIC3-203ENST00000494426 M0QXV9 152 aa14.48□□□□□ -0.09
CLIC3-203ENST00000494426 PLNP26678 52 aa14.48□□□□□ -0.09
CLIC3-203ENST00000494426 PFN2P35080 140 aa14.48□□□□□ -0.09
CLIC3-203ENST00000494426 PSORS1C2Q9UIG4 136 aa14.48□□□□□ -0.09
CLIC3-203ENST00000494426 ERG28Q9UKR5 140 aa14.48□□□□□ -0.09
CLIC3-203ENST00000494426 HERC1Q15751 4861 aa14.47□□□□□ -0.09
CLIC3-203ENST00000494426 DPM2O94777 84 aa14.47□□□□□ -0.09
CLIC3-203ENST00000494426 LRP1Q07954 4544 aaKnown RBP14.46□□□□□ -0.09
CLIC3-203ENST00000494426 SYS1-DBNDD2H3BUS1 97 aa14.46□□□□□ -0.09
CLIC3-203ENST00000494426 SFTA2Q6UW10 78 aa14.46□□□□□ -0.09
CLIC3-203ENST00000494426 KRTAP29-1A8MX34 341 aaPredicted RBP14.45□□□□□ -0.1
CLIC3-203ENST00000494426 IGKCP01834 107 aa14.45□□□□□ -0.1
CLIC3-203ENST00000494426 C22orf24Q9Y442 160 aa14.45□□□□□ -0.1
CLIC3-203ENST00000494426 FAT3Q8TDW7 4589 aa14.44□□□□□ -0.1
CLIC3-203ENST00000494426 SRSF9Q13242 221 aaKnown RBP eCLIP14.43□□□□□ -0.1
CLIC3-203ENST00000494426 COX17Q14061 63 aa14.43□□□□□ -0.1
CLIC3-203ENST00000494426 PLA2G2DQ9UNK4 145 aa14.43□□□□□ -0.1
CLIC3-203ENST00000494426 TSPEAR-AS2P59090 65 aa14.42□□□□□ -0.1
CLIC3-203ENST00000494426 LEPROTO15243 131 aa14.41□□□□□ -0.1
CLIC3-203ENST00000494426 SND1-IT1Q9HBX3 110 aa14.41□□□□□ -0.1
CLIC3-203ENST00000494426 C1orf137Q5JT78 98 aa14.4□□□□□ -0.1
CLIC3-203ENST00000494426 LINC01545Q5VT33 79 aa14.4□□□□□ -0.1
CLIC3-203ENST00000494426 C3orf79P0CE67 100 aa14.39□□□□□ -0.11
CLIC3-203ENST00000494426 UBE2BP63146 152 aa14.39□□□□□ -0.11
CLIC3-203ENST00000494426 PET117Q6UWS5 81 aa14.39□□□□□ -0.11
CLIC3-203ENST00000494426 TP73-AS1Q9UF72 201 aa14.39□□□□□ -0.11
CLIC3-203ENST00000494426 NDUFA12Q9UI09 145 aa14.39□□□□□ -0.11
CLIC3-203ENST00000494426 OXTP01178 125 aa14.38□□□□□ -0.11
CLIC3-203ENST00000494426 PLEKHB2Q96CS7 222 aa14.38□□□□□ -0.11
CLIC3-203ENST00000494426 IGLV5-37A0A075B6J1 123 aa14.37□□□□□ -0.11
CLIC3-203ENST00000494426 SPINK6Q6UWN8 80 aa14.37□□□□□ -0.11
CLIC3-203ENST00000494426 A0A0U1RRA0 63 aa14.36□□□□□ -0.11
CLIC3-203ENST00000494426 LINC00158P58513 81 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms