RNA–Protein interactions for RNA: ENST00000493619.1

RTN4IP1-202, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 3

Gene RTN4IP1, Length 208 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-202ENST00000493619 TMEM242Q9NWH2 141 aa3.62□□□□□ -1.83
RTN4IP1-202ENST00000493619 CARHSP1Q9Y2V2 147 aaKnown RBP3.62□□□□□ -1.83
RTN4IP1-202ENST00000493619 PKHD1L1Q86WI1 4243 aa3.61□□□□□ -1.83
RTN4IP1-202ENST00000493619 IGLV1-50A0A075B6I6 118 aa3.61□□□□□ -1.83
RTN4IP1-202ENST00000493619 TRAV9-1A0A075B6T8 112 aa3.61□□□□□ -1.83
RTN4IP1-202ENST00000493619 A0A096LNI7 61 aa3.61□□□□□ -1.83
RTN4IP1-202ENST00000493619 IGKV2-24A0A0C4DH68 120 aa3.61□□□□□ -1.83
RTN4IP1-202ENST00000493619 NUPR1O60356 82 aa3.61□□□□□ -1.83
RTN4IP1-202ENST00000493619 MT-ND6P03923 174 aa3.61□□□□□ -1.83
RTN4IP1-202ENST00000493619 RPL23P62829 140 aaKnown RBP3.61□□□□□ -1.83
RTN4IP1-202ENST00000493619 SPAG11BQ08648 103 aa3.61□□□□□ -1.83
RTN4IP1-202ENST00000493619 SRSF9Q13242 221 aaKnown RBP eCLIP3.61□□□□□ -1.83
RTN4IP1-202ENST00000493619 ADIRFQ15847 76 aa3.61□□□□□ -1.83
RTN4IP1-202ENST00000493619 HIGD2BQ4VC39 106 aa3.61□□□□□ -1.83
RTN4IP1-202ENST00000493619 TMEM141Q96I45 108 aa3.61□□□□□ -1.83
RTN4IP1-202ENST00000493619 PACRGQ96M98 296 aaPredicted RBP3.61□□□□□ -1.83
RTN4IP1-202ENST00000493619 MAP1LC3AQ9H492 121 aa3.61□□□□□ -1.83
RTN4IP1-202ENST00000493619 GEMIN7Q9H840 131 aaKnown RBP3.61□□□□□ -1.83
RTN4IP1-202ENST00000493619 NXT2Q9NPJ8 142 aaKnown RBP3.61□□□□□ -1.83
RTN4IP1-202ENST00000493619 FAT3Q8TDW7 4589 aa3.61□□□□□ -1.83
RTN4IP1-202ENST00000493619 IGHV3OR16-9A0A0B4J2B5 98 aa3.6□□□□□ -1.83
RTN4IP1-202ENST00000493619 IFITM10A6NMD0 228 aa3.6□□□□□ -1.83
RTN4IP1-202ENST00000493619 MT-ND4LP03901 98 aa3.6□□□□□ -1.83
RTN4IP1-202ENST00000493619 MT1HL1P0DM35 61 aa3.6□□□□□ -1.83
RTN4IP1-202ENST00000493619 RAB14P61106 215 aa3.6□□□□□ -1.83
RTN4IP1-202ENST00000493619 HERVK_113P63121 156 aa3.6□□□□□ -1.83
RTN4IP1-202ENST00000493619 C6orf226Q5I0X4 101 aa3.6□□□□□ -1.83
RTN4IP1-202ENST00000493619 TEX43Q6ZNM6 134 aa3.6□□□□□ -1.83
RTN4IP1-202ENST00000493619 FAM19A3Q7Z5A8 133 aa3.6□□□□□ -1.83
RTN4IP1-202ENST00000493619 LINC00526Q96FQ7 95 aa3.6□□□□□ -1.83
RTN4IP1-202ENST00000493619 TP73-AS1Q9UF72 201 aa3.6□□□□□ -1.83
RTN4IP1-202ENST00000493619 CYSLTR1Q9Y271 337 aa3.6□□□□□ -1.83
RTN4IP1-202ENST00000493619 HMCN2Q8NDA2 5059 aa3.59□□□□□ -1.83
RTN4IP1-202ENST00000493619 TRAV13-1A0A0B4J241 112 aa3.59□□□□□ -1.83
RTN4IP1-202ENST00000493619 A0A0U1RQV1 116 aa3.59□□□□□ -1.83
RTN4IP1-202ENST00000493619 A0A1B0GXF2 115 aa3.59□□□□□ -1.83
RTN4IP1-202ENST00000493619 NDUFC2-KCTD14E9PQ53 114 aa3.59□□□□□ -1.83
RTN4IP1-202ENST00000493619 PANO1I0J062 215 aa3.59□□□□□ -1.83
RTN4IP1-202ENST00000493619 CHTF8P0CG12 524 aa3.59□□□□□ -1.83
RTN4IP1-202ENST00000493619 RPL18AQ02543 176 aaKnown RBP3.59□□□□□ -1.83
RTN4IP1-202ENST00000493619 MRPL51Q4U2R6 128 aaKnown RBP3.59□□□□□ -1.83
RTN4IP1-202ENST00000493619 Q8IZM0 81 aa3.59□□□□□ -1.83
RTN4IP1-202ENST00000493619 ORAOV1Q8WV07 137 aa3.59□□□□□ -1.83
RTN4IP1-202ENST00000493619 D6R8Y8 96 aa3.58□□□□□ -1.84
RTN4IP1-202ENST00000493619 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.58□□□□□ -1.84
RTN4IP1-202ENST00000493619 KRTAP10-8P60410 259 aa3.58□□□□□ -1.84
RTN4IP1-202ENST00000493619 C9orf116Q5BN46 136 aaPredicted RBP3.58□□□□□ -1.84
RTN4IP1-202ENST00000493619 TMEM136Q6ZRR5 245 aa3.58□□□□□ -1.84
RTN4IP1-202ENST00000493619 TIMM17AQ99595 171 aa3.58□□□□□ -1.84
RTN4IP1-202ENST00000493619 LRP1Q07954 4544 aaKnown RBP3.58□□□□□ -1.84
RTN4IP1-202ENST00000493619 H0Y9J4 135 aa3.57□□□□□ -1.84
RTN4IP1-202ENST00000493619 IGLV7-43P04211 117 aa3.57□□□□□ -1.84
RTN4IP1-202ENST00000493619 HNRNPA3P51991 378 aaKnown RBP3.57□□□□□ -1.84
RTN4IP1-202ENST00000493619 CKS1BP61024 79 aa3.57□□□□□ -1.84
RTN4IP1-202ENST00000493619 Q6ZUT4 128 aa3.57□□□□□ -1.84
RTN4IP1-202ENST00000493619 Q8N8P6 123 aa3.57□□□□□ -1.84
RTN4IP1-202ENST00000493619 PRELID3AQ96N28 172 aa3.57□□□□□ -1.84
RTN4IP1-202ENST00000493619 F8VRH5 84 aa3.56□□□□□ -1.84
RTN4IP1-202ENST00000493619 S100PP25815 95 aa3.56□□□□□ -1.84
RTN4IP1-202ENST00000493619 RPL28P46779 137 aaKnown RBP3.56□□□□□ -1.84
RTN4IP1-202ENST00000493619 UBE2D1P51668 147 aa3.56□□□□□ -1.84
RTN4IP1-202ENST00000493619 UBE2BP63146 152 aa3.56□□□□□ -1.84
RTN4IP1-202ENST00000493619 C1orf137Q5JT78 98 aa3.56□□□□□ -1.84
RTN4IP1-202ENST00000493619 C5orf38Q86SI9 138 aa3.56□□□□□ -1.84
RTN4IP1-202ENST00000493619 FAM218AQ96MZ4 157 aa3.56□□□□□ -1.84
RTN4IP1-202ENST00000493619 AMELXQ99217 191 aa3.56□□□□□ -1.84
RTN4IP1-202ENST00000493619 IGLV4-3A0A075B6K6 122 aa3.55□□□□□ -1.84
RTN4IP1-202ENST00000493619 H3BRM9 83 aa3.55□□□□□ -1.84
RTN4IP1-202ENST00000493619 M0QXV9 152 aa3.55□□□□□ -1.84
RTN4IP1-202ENST00000493619 ATP5LO75964 103 aa3.55□□□□□ -1.84
RTN4IP1-202ENST00000493619 LINC00242Q5T6M2 205 aa3.55□□□□□ -1.84
RTN4IP1-202ENST00000493619 C2orf66Q6UXQ4 117 aa3.55□□□□□ -1.84
RTN4IP1-202ENST00000493619 TNXBP22105 4242 aa3.54□□□□□ -1.84
RTN4IP1-202ENST00000493619 NPYP01303 97 aa3.54□□□□□ -1.84
RTN4IP1-202ENST00000493619 COX17Q14061 63 aa3.54□□□□□ -1.84
RTN4IP1-202ENST00000493619 PDZD11Q5EBL8 140 aa3.54□□□□□ -1.84
RTN4IP1-202ENST00000493619 MRPL54Q6P161 138 aaKnown RBP3.54□□□□□ -1.84
RTN4IP1-202ENST00000493619 FA2HQ7L5A8 372 aa3.54□□□□□ -1.84
RTN4IP1-202ENST00000493619 TINCRA0A1B0GVN0 87 aa3.53□□□□□ -1.84
RTN4IP1-202ENST00000493619 LINC00587B1AMM8 73 aa3.53□□□□□ -1.84
RTN4IP1-202ENST00000493619 SMKR1H3BMG3 65 aa3.53□□□□□ -1.84
RTN4IP1-202ENST00000493619 ZNF861PO60384 105 aa3.53□□□□□ -1.84
RTN4IP1-202ENST00000493619 RPL39P62891 51 aaKnown RBP3.53□□□□□ -1.84
RTN4IP1-202ENST00000493619 KIAA0087Q14695 138 aa3.53□□□□□ -1.84
RTN4IP1-202ENST00000493619 TOMM6Q96B49 74 aa3.53□□□□□ -1.84
RTN4IP1-202ENST00000493619 GNB1LQ9BYB4 327 aa3.53□□□□□ -1.84
RTN4IP1-202ENST00000493619 C6orf48Q9UBA6 75 aa3.53□□□□□ -1.84
RTN4IP1-202ENST00000493619 A0A1W2PNN7 141 aa3.52□□□□□ -1.85
RTN4IP1-202ENST00000493619 LINC01546A6NGU7 62 aa3.52□□□□□ -1.85
RTN4IP1-202ENST00000493619 IGIPA6NJ69 53 aa3.52□□□□□ -1.85
RTN4IP1-202ENST00000493619 GAS8-AS1O95177 125 aa3.52□□□□□ -1.85
RTN4IP1-202ENST00000493619 RAB5BP61020 215 aa3.52□□□□□ -1.85
RTN4IP1-202ENST00000493619 FAM229BQ4G0N7 80 aa3.52□□□□□ -1.85
RTN4IP1-202ENST00000493619 HSBP1L1C9JCN9 74 aa3.51□□□□□ -1.85
RTN4IP1-202ENST00000493619 BCE1O60756 84 aa3.51□□□□□ -1.85
RTN4IP1-202ENST00000493619 CRYGAP11844 174 aa3.51□□□□□ -1.85
RTN4IP1-202ENST00000493619 S100A12P80511 92 aa3.51□□□□□ -1.85
RTN4IP1-202ENST00000493619 RHEBQ15382 184 aa3.51□□□□□ -1.85
RTN4IP1-202ENST00000493619 KRTAP15-1Q3LI76 137 aa3.51□□□□□ -1.85
RTN4IP1-202ENST00000493619 KIAA1644Q3SXP7 199 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms