RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 RPRMQ9NS64 109 aa1.67□□□□□ -2.14
SNX13-209ENST00000492626 HIGD1AQ9Y241 93 aa1.67□□□□□ -2.14
SNX13-209ENST00000492626 MED31Q9Y3C7 131 aa1.67□□□□□ -2.14
SNX13-209ENST00000492626 H7C2G1 150 aa1.67□□□□□ -2.14
SNX13-209ENST00000492626 GYPAP02724 150 aa1.67□□□□□ -2.14
SNX13-209ENST00000492626 HIST1H1DP16402 221 aaKnown RBP1.67□□□□□ -2.14
SNX13-209ENST00000492626 FAM229BQ4G0N7 80 aa1.67□□□□□ -2.14
SNX13-209ENST00000492626 ODF3Q96PU9 254 aa1.67□□□□□ -2.14
SNX13-209ENST00000492626 CSMD3Q7Z407 3707 aa1.67□□□□□ -2.14
SNX13-209ENST00000492626 TRAV36DV7A0A075B6V5 113 aa1.67□□□□□ -2.14
SNX13-209ENST00000492626 TRAV3A0A0B4J244 114 aa1.67□□□□□ -2.14
SNX13-209ENST00000492626 MDFIC2A0A1B0GVS7 189 aa1.67□□□□□ -2.14
SNX13-209ENST00000492626 SSSCA1O60232 199 aa1.67□□□□□ -2.14
SNX13-209ENST00000492626 SPINK4O60575 86 aa1.67□□□□□ -2.14
SNX13-209ENST00000492626 PRH1P02810 166 aa1.67□□□□□ -2.14
SNX13-209ENST00000492626 SLC25A5P05141 298 aaKnown RBP1.67□□□□□ -2.14
SNX13-209ENST00000492626 GNG4P50150 75 aa1.67□□□□□ -2.14
SNX13-209ENST00000492626 KRTAP10-5P60370 271 aa1.67□□□□□ -2.14
SNX13-209ENST00000492626 HSPE1P61604 102 aaKnown RBP1.67□□□□□ -2.14
SNX13-209ENST00000492626 LCN6P62502 163 aa1.67□□□□□ -2.14
SNX13-209ENST00000492626 GNG5P63218 68 aa1.67□□□□□ -2.14
SNX13-209ENST00000492626 C12orf74Q32Q52 190 aa1.67□□□□□ -2.14
SNX13-209ENST00000492626 VMO1Q7Z5L0 202 aa1.67□□□□□ -2.14
SNX13-209ENST00000492626 OR51T1Q8NGJ9 327 aa1.67□□□□□ -2.14
SNX13-209ENST00000492626 OSTCQ9NRP0 149 aa1.67□□□□□ -2.14
SNX13-209ENST00000492626 AMMECR1Q9Y4X0 333 aaPredicted RBP1.67□□□□□ -2.14
SNX13-209ENST00000492626 PKD1P98161 4303 aa1.67□□□□□ -2.14
SNX13-209ENST00000492626 MED12Q93074 2177 aa1.67□□□□□ -2.14
SNX13-209ENST00000492626 IGKV2D-26A0A0A0MRZ7 120 aa1.66□□□□□ -2.14
SNX13-209ENST00000492626 NBDYA0A0U1RRE5 68 aa1.66□□□□□ -2.14
SNX13-209ENST00000492626 NAPSAO96009 420 aa1.66□□□□□ -2.14
SNX13-209ENST00000492626 GUCA1AP43080 201 aaPredicted RBP1.66□□□□□ -2.14
SNX13-209ENST00000492626 CFAP126Q5VTH2 177 aa1.66□□□□□ -2.14
SNX13-209ENST00000492626 MT1HL1P0DM35 61 aa1.66□□□□□ -2.14
SNX13-209ENST00000492626 MIFP14174 115 aa1.66□□□□□ -2.14
SNX13-209ENST00000492626 EVI2AP22794 236 aa1.66□□□□□ -2.14
SNX13-209ENST00000492626 KTN1-AS1Q86SY8 53 aa1.66□□□□□ -2.14
SNX13-209ENST00000492626 IMUPQ9GZP8 106 aa1.66□□□□□ -2.14
SNX13-209ENST00000492626 IGHV3-64A0A075B6Q5 118 aa1.66□□□□□ -2.14
SNX13-209ENST00000492626 TRAV27A0A087WT01 109 aa1.66□□□□□ -2.14
SNX13-209ENST00000492626 IGHV1-24A0A0C4DH33 117 aa1.66□□□□□ -2.14
SNX13-209ENST00000492626 RBAKDNA6NC62 111 aa1.66□□□□□ -2.14
SNX13-209ENST00000492626 J3QQQ9 107 aa1.66□□□□□ -2.14
SNX13-209ENST00000492626 RER1O15258 196 aa1.66□□□□□ -2.14
SNX13-209ENST00000492626 CST7O76096 145 aa1.66□□□□□ -2.14
SNX13-209ENST00000492626 COX8AP10176 69 aa1.66□□□□□ -2.14
SNX13-209ENST00000492626 LINC01590Q5TEZ4 76 aa1.66□□□□□ -2.14
SNX13-209ENST00000492626 GTF2H5Q6ZYL4 71 aa1.66□□□□□ -2.14
SNX13-209ENST00000492626 OTOSQ8NHW6 89 aa1.66□□□□□ -2.14
SNX13-209ENST00000492626 SMIM7Q9BQ49 75 aa1.66□□□□□ -2.14
SNX13-209ENST00000492626 HIGD1BQ9P298 99 aa1.66□□□□□ -2.14
SNX13-209ENST00000492626 PSORS1C2Q9UIG4 136 aa1.66□□□□□ -2.14
SNX13-209ENST00000492626 TRAV2A0A0B4J234 112 aa1.66□□□□□ -2.14
SNX13-209ENST00000492626 C17orf112F2Z3M2 114 aa1.66□□□□□ -2.14
SNX13-209ENST00000492626 ATP5G3P48201 142 aa1.66□□□□□ -2.14
SNX13-209ENST00000492626 BAGE3Q86Y29 109 aa1.66□□□□□ -2.14
SNX13-209ENST00000492626 BAGE2Q86Y30 109 aa1.66□□□□□ -2.14
SNX13-209ENST00000492626 OR5A1Q8NGJ0 315 aa1.66□□□□□ -2.14
SNX13-209ENST00000492626 H1FXQ92522 213 aaKnown RBP1.66□□□□□ -2.14
SNX13-209ENST00000492626 LHFPL6Q9Y693 200 aa1.66□□□□□ -2.14
SNX13-209ENST00000492626 V9GYV3 84 aa1.66□□□□□ -2.14
SNX13-209ENST00000492626 ZNF407Q9C0G0 2248 aa1.65□□□□□ -2.14
SNX13-209ENST00000492626 IGLV10-54A0A075B6I4 117 aa1.65□□□□□ -2.14
SNX13-209ENST00000492626 CEBPZOSA8MTT3 80 aa1.65□□□□□ -2.14
SNX13-209ENST00000492626 TCL1BO95988 128 aa1.65□□□□□ -2.14
SNX13-209ENST00000492626 MIR17HGQ75NE6 70 aa1.65□□□□□ -2.14
SNX13-209ENST00000492626 MBD3L1Q8WWY6 194 aa1.65□□□□□ -2.14
SNX13-209ENST00000492626 DPH3Q96FX2 82 aa1.65□□□□□ -2.14
SNX13-209ENST00000492626 DSCR8Q96T75 97 aa1.65□□□□□ -2.14
SNX13-209ENST00000492626 TRAV5A0A0B4J249 113 aa1.65□□□□□ -2.15
SNX13-209ENST00000492626 A0A1W2PNN7 141 aa1.65□□□□□ -2.15
SNX13-209ENST00000492626 DUXBA0A1W2PPF3 345 aa1.65□□□□□ -2.15
SNX13-209ENST00000492626 F8W1H4 67 aa1.65□□□□□ -2.15
SNX13-209ENST00000492626 FAUP35544 74 aaKnown RBP1.65□□□□□ -2.15
SNX13-209ENST00000492626 KRTAP10-4P60372 401 aaPredicted RBP1.65□□□□□ -2.15
SNX13-209ENST00000492626 C20orf166-AS1Q96NR2 134 aa1.65□□□□□ -2.15
SNX13-209ENST00000492626 PRADC1Q9BSG0 188 aa1.65□□□□□ -2.15
SNX13-209ENST00000492626 LAMTOR3Q9UHA4 124 aa1.65□□□□□ -2.15
SNX13-209ENST00000492626 TRAV7A0A075B6U4 112 aa1.65□□□□□ -2.15
SNX13-209ENST00000492626 A0A1W2PNM2 257 aa1.65□□□□□ -2.15
SNX13-209ENST00000492626 H3BNG1 76 aa1.65□□□□□ -2.15
SNX13-209ENST00000492626 LGALS1P09382 135 aaKnown RBP1.65□□□□□ -2.15
SNX13-209ENST00000492626 UBE2G1P62253 170 aa1.65□□□□□ -2.15
SNX13-209ENST00000492626 SLC48A1Q6P1K1 146 aa1.65□□□□□ -2.15
SNX13-209ENST00000492626 TMEM14EPQ6UXP3 125 aa1.65□□□□□ -2.15
SNX13-209ENST00000492626 LINC01600Q96MT4 127 aa1.65□□□□□ -2.15
SNX13-209ENST00000492626 ARL2-SNX15V9GYD0 113 aa1.65□□□□□ -2.15
SNX13-209ENST00000492626 TACC2O95359 2948 aa1.64□□□□□ -2.15
SNX13-209ENST00000492626 DMBT1Q9UGM3 2413 aaPredicted RBP1.64□□□□□ -2.15
SNX13-209ENST00000492626 M0R2P5 195 aa1.64□□□□□ -2.15
SNX13-209ENST00000492626 ZNF73O43830 326 aaPredicted RBP1.64□□□□□ -2.15
SNX13-209ENST00000492626 PCBD1P61457 104 aa1.64□□□□□ -2.15
SNX13-209ENST00000492626 SEC11AP67812 179 aa1.64□□□□□ -2.15
SNX13-209ENST00000492626 SSBP1Q04837 148 aaKnown RBP1.64□□□□□ -2.15
SNX13-209ENST00000492626 FP248Q71RG6 208 aaPredicted RBP1.64□□□□□ -2.15
SNX13-209ENST00000492626 PBOV1Q9GZY1 135 aa1.64□□□□□ -2.15
SNX13-209ENST00000492626 TAS2R4Q9NYW5 299 aa1.64□□□□□ -2.15
SNX13-209ENST00000492626 CRYM-AS1A6NIL9 109 aa1.64□□□□□ -2.15
SNX13-209ENST00000492626 IFITM1P13164 125 aa1.64□□□□□ -2.15
SNX13-209ENST00000492626 RPL28P46779 137 aaKnown RBP1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms